RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TTC39AQ5SRH9 613 aa17.72■□□□□ 0.43
NIPAL3-202ENST00000339255 GGA1Q9UJY5 639 aa17.72■□□□□ 0.43
NIPAL3-202ENST00000339255 NSFL1CQ9UNZ2 370 aaKnown RBP17.72■□□□□ 0.43
NIPAL3-202ENST00000339255 UQCRFS1P1P0C7P4 283 aa17.71■□□□□ 0.43
NIPAL3-202ENST00000339255 C15orf52Q6ZUT6 534 aaKnown RBP17.71■□□□□ 0.43
NIPAL3-202ENST00000339255 A0A0G2JLW4 131 aa17.71■□□□□ 0.42
NIPAL3-202ENST00000339255 GPSM2P81274 684 aa17.71■□□□□ 0.42
NIPAL3-202ENST00000339255 CCDC102BQ68D86 513 aa17.71■□□□□ 0.42
NIPAL3-202ENST00000339255 CNTROBQ8N137 903 aa17.71■□□□□ 0.42
NIPAL3-202ENST00000339255 PIM2Q9P1W9 311 aa17.71■□□□□ 0.42
NIPAL3-202ENST00000339255 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 SOCS7O14512 581 aa17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 ZBTB22O15209 634 aa17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 UFL1O94874 794 aa17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 KCNA3P22001 575 aa17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 ARID4AP29374 1257 aaPredicted RBP17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 SOGA3Q5TF21 947 aa17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 HAUS7Q99871 368 aa17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 GNL3LQ9NVN8 582 aaKnown RBP17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 MYH7P12883 1935 aa17.7■□□□□ 0.42
NIPAL3-202ENST00000339255 SDSP20132 328 aa17.69■□□□□ 0.42
NIPAL3-202ENST00000339255 TICAM2Q86XR7 235 aa17.69■□□□□ 0.42
NIPAL3-202ENST00000339255 VPS37DQ86XT2 251 aa17.69■□□□□ 0.42
NIPAL3-202ENST00000339255 MPNDQ8N594 471 aa17.69■□□□□ 0.42
NIPAL3-202ENST00000339255 C7orf43Q8WVR3 580 aa17.69■□□□□ 0.42
NIPAL3-202ENST00000339255 PPP1R1BQ9UD71 204 aaPredicted RBP17.69■□□□□ 0.42
NIPAL3-202ENST00000339255 MED23Q9ULK4 1368 aa17.69■□□□□ 0.42
NIPAL3-202ENST00000339255 TRIM6-TRIM34B2RNG4 842 aa17.68■□□□□ 0.42
NIPAL3-202ENST00000339255 SNAP23O00161 211 aa17.68■□□□□ 0.42
NIPAL3-202ENST00000339255 DPP8Q6V1X1 898 aaPredicted RBP17.68■□□□□ 0.42
NIPAL3-202ENST00000339255 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
NIPAL3-202ENST00000339255 SEMA3EO15041 775 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 PHKA1P46020 1223 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 TBC1D16Q8TBP0 767 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 BOLA2Q9H3K6 86 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 IRS2Q9Y4H2 1338 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 SNED1Q8TER0 1413 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 CDC45O75419 566 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 DALRD3Q5D0E6 543 aaKnown RBP17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 CASC1Q6TDU7 716 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 ZNF804AQ7Z570 1209 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 FBXO33Q7Z6M2 555 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 RFX7Q2KHR2 1363 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 DOCK2Q92608 1830 aa17.67■□□□□ 0.42
NIPAL3-202ENST00000339255 PDS5AQ29RF7 1337 aaKnown RBP17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 HIBADHP31937 336 aaKnown RBP17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 BCAMP50895 628 aa17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 RTKN2Q8IZC4 609 aa17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 RILPL2Q969X0 211 aa17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 FAM84BQ96KN1 310 aaPredicted RBP17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 EYA3Q99504 573 aa17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 POLLQ9UGP5 575 aa17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 FER1L6Q2WGJ9 1857 aa17.66■□□□□ 0.42
NIPAL3-202ENST00000339255 MCAMP43121 646 aa17.65■□□□□ 0.42
NIPAL3-202ENST00000339255 GYG1P46976 350 aa17.65■□□□□ 0.42
NIPAL3-202ENST00000339255 DNAJC2Q99543 621 aaKnown RBP17.65■□□□□ 0.42
NIPAL3-202ENST00000339255 RTFDC1Q9BY42 306 aaPredicted RBP17.65■□□□□ 0.42
NIPAL3-202ENST00000339255 PAG1Q9NWQ8 432 aa17.65■□□□□ 0.42
NIPAL3-202ENST00000339255 WTIPA6NIX2 430 aaPredicted RBP17.64■□□□□ 0.42
NIPAL3-202ENST00000339255 RASGRF1Q13972 1273 aa17.64■□□□□ 0.42
NIPAL3-202ENST00000339255 TTF1Q15361 905 aaPredicted RBP17.64■□□□□ 0.42
NIPAL3-202ENST00000339255 C8orf34Q49A92 452 aa17.64■□□□□ 0.42
NIPAL3-202ENST00000339255 SUPT20HQ8NEM7 779 aa17.64■□□□□ 0.42
NIPAL3-202ENST00000339255 HIP1O00291 1037 aa17.64■□□□□ 0.41
NIPAL3-202ENST00000339255 KLRK1P26718 216 aa17.64■□□□□ 0.41
NIPAL3-202ENST00000339255 LRRFIP1Q32MZ4 808 aaKnown RBP17.64■□□□□ 0.41
NIPAL3-202ENST00000339255 SLC51AQ86UW1 340 aa17.64■□□□□ 0.41
NIPAL3-202ENST00000339255 SPATA5Q8NB90 893 aa17.64■□□□□ 0.41
NIPAL3-202ENST00000339255 DENND2AQ9ULE3 1009 aa17.64■□□□□ 0.41
NIPAL3-202ENST00000339255 C21orf2O43822 256 aa17.63■□□□□ 0.41
NIPAL3-202ENST00000339255 FKBP4Q02790 459 aaKnown RBP eCLIP17.63■□□□□ 0.41
NIPAL3-202ENST00000339255 SCARF1Q14162 830 aa17.63■□□□□ 0.41
NIPAL3-202ENST00000339255 OLFM4Q6UX06 510 aa17.63■□□□□ 0.41
NIPAL3-202ENST00000339255 PSMD1Q99460 953 aa17.63■□□□□ 0.41
NIPAL3-202ENST00000339255 MYO5AQ9Y4I1 1855 aaKnown RBP17.62■□□□□ 0.41
NIPAL3-202ENST00000339255 GOLIM4O00461 696 aa17.62■□□□□ 0.41
NIPAL3-202ENST00000339255 MAP4K4O95819 1239 aaPredicted RBP17.62■□□□□ 0.41
NIPAL3-202ENST00000339255 KBTBD3Q8NAB2 608 aa17.62■□□□□ 0.41
NIPAL3-202ENST00000339255 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
NIPAL3-202ENST00000339255 ZC3H12CQ9C0D7 883 aaKnown RBP17.62■□□□□ 0.41
NIPAL3-202ENST00000339255 HMG20BQ9P0W2 317 aa17.62■□□□□ 0.41
NIPAL3-202ENST00000339255 CHD4Q14839 1912 aa17.62■□□□□ 0.41
NIPAL3-202ENST00000339255 CCDC88AQ3V6T2 1871 aa17.62■□□□□ 0.41
NIPAL3-202ENST00000339255 FRAT2O75474 233 aaPredicted RBP17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 WASHC4Q2M389 1173 aa17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 TBC1D9Q6ZT07 1266 aa17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 TXNRD3Q86VQ6 643 aa17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 FHDC1Q9C0D6 1143 aaPredicted RBP17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 COA1Q9GZY4 146 aa17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 ZNF219Q9P2Y4 722 aaPredicted RBP17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 ZAP70P43403 619 aa17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 VPS33BQ9H267 617 aa17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 SNRKQ9NRH2 765 aa17.61■□□□□ 0.41
NIPAL3-202ENST00000339255 COL1A1P02452 1464 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms