RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 DGKZQ13574 1117 aa20.09■□□□□ 0.81
LINC01116-202ENST00000339037 SCARF1Q14162 830 aa20.09■□□□□ 0.81
LINC01116-202ENST00000339037 PODNQ7Z5L7 613 aa20.09■□□□□ 0.81
LINC01116-202ENST00000339037 TSPYL6Q8N831 410 aa20.09■□□□□ 0.81
LINC01116-202ENST00000339037 PI4KAP1Q8N8J0 262 aa20.09■□□□□ 0.81
LINC01116-202ENST00000339037 USP17L3A6NCW0 530 aa20.08■□□□□ 0.81
LINC01116-202ENST00000339037 USP17L4A6NCW7 530 aa20.08■□□□□ 0.81
LINC01116-202ENST00000339037 USP17L1Q7RTZ2 530 aa20.08■□□□□ 0.81
LINC01116-202ENST00000339037 GMLQ99445 158 aa20.08■□□□□ 0.81
LINC01116-202ENST00000339037 STK31Q9BXU1 1019 aa20.08■□□□□ 0.81
LINC01116-202ENST00000339037 MYOZ2Q9NPC6 264 aa20.08■□□□□ 0.81
LINC01116-202ENST00000339037 TNRC18O15417 2968 aaPredicted RBP20.08■□□□□ 0.8
LINC01116-202ENST00000339037 SLC10A3P09131 477 aa20.07■□□□□ 0.8
LINC01116-202ENST00000339037 RGS19P49795 217 aa20.07■□□□□ 0.8
LINC01116-202ENST00000339037 TTLL11Q8NHH1 800 aa20.07■□□□□ 0.8
LINC01116-202ENST00000339037 TSR2Q969E8 191 aaKnown RBP20.07■□□□□ 0.8
LINC01116-202ENST00000339037 GREM2Q9H772 168 aa20.07■□□□□ 0.8
LINC01116-202ENST00000339037 BSDC1Q9NW68 430 aaPredicted RBP20.07■□□□□ 0.8
LINC01116-202ENST00000339037 MED23Q9ULK4 1368 aa20.07■□□□□ 0.8
LINC01116-202ENST00000339037 PITPNM2Q9BZ72 1349 aa20.06■□□□□ 0.8
LINC01116-202ENST00000339037 MINPP1Q9UNW1 487 aa20.06■□□□□ 0.8
LINC01116-202ENST00000339037 PSME4Q14997 1843 aa20.05■□□□□ 0.8
LINC01116-202ENST00000339037 TRPA1O75762 1119 aa20.05■□□□□ 0.8
LINC01116-202ENST00000339037 FKBP1BP68106 108 aa20.05■□□□□ 0.8
LINC01116-202ENST00000339037 CWF19L2Q2TBE0 894 aaKnown RBP20.05■□□□□ 0.8
LINC01116-202ENST00000339037 RNF186Q9NXI6 227 aa20.05■□□□□ 0.8
LINC01116-202ENST00000339037 WTIPA6NIX2 430 aaPredicted RBP20.04■□□□□ 0.8
LINC01116-202ENST00000339037 NEURL1BA8MQ27 555 aa20.04■□□□□ 0.8
LINC01116-202ENST00000339037 UBE3BQ7Z3V4 1068 aa20.04■□□□□ 0.8
LINC01116-202ENST00000339037 CCT4P50991 539 aaKnown RBP20.03■□□□□ 0.8
LINC01116-202ENST00000339037 RASAL3Q86YV0 1011 aa20.03■□□□□ 0.8
LINC01116-202ENST00000339037 OGFOD1Q8N543 542 aa20.03■□□□□ 0.8
LINC01116-202ENST00000339037 CSRNP1Q96S65 589 aa20.03■□□□□ 0.8
LINC01116-202ENST00000339037 PAPPA2Q9BXP8 1791 aa20.03■□□□□ 0.8
LINC01116-202ENST00000339037 CCDC27Q2M243 656 aa20.02■□□□□ 0.8
LINC01116-202ENST00000339037 TWISTNBQ3B726 338 aaPredicted RBP20.02■□□□□ 0.8
LINC01116-202ENST00000339037 DACT2Q5SW24 774 aa20.02■□□□□ 0.8
LINC01116-202ENST00000339037 REM2Q8IYK8 340 aaPredicted RBP20.02■□□□□ 0.8
LINC01116-202ENST00000339037 FBXW7Q969H0 707 aa20.02■□□□□ 0.8
LINC01116-202ENST00000339037 MYO3BQ8WXR4 1341 aa20.02■□□□□ 0.79
LINC01116-202ENST00000339037 IGHMBP2P38935 993 aaKnown RBP20.01■□□□□ 0.79
LINC01116-202ENST00000339037 NBPF9Q3BBW0 867 aa20.01■□□□□ 0.79
LINC01116-202ENST00000339037 WWC1Q8IX03 1113 aa20.01■□□□□ 0.79
LINC01116-202ENST00000339037 COA1Q9GZY4 146 aa20.01■□□□□ 0.79
LINC01116-202ENST00000339037 SCAF8Q9UPN6 1271 aaKnown RBP20.01■□□□□ 0.79
LINC01116-202ENST00000339037 MYH3P11055 1940 aa20.01■□□□□ 0.79
LINC01116-202ENST00000339037 H7C1W4 665 aa20■□□□□ 0.79
LINC01116-202ENST00000339037 STRIP1Q5VSL9 837 aa20■□□□□ 0.79
LINC01116-202ENST00000339037 G2E3Q7L622 706 aa20■□□□□ 0.79
LINC01116-202ENST00000339037 MXD3Q9BW11 206 aa20■□□□□ 0.79
LINC01116-202ENST00000339037 LEMD3Q9Y2U8 911 aa20■□□□□ 0.79
LINC01116-202ENST00000339037 GCKRQ14397 625 aa19.99■□□□□ 0.79
LINC01116-202ENST00000339037 SPEF2Q9C093 1822 aa19.99■□□□□ 0.79
LINC01116-202ENST00000339037 AKAP11Q9UKA4 1901 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 WNT10BO00744 389 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 ITGA6P23229 1130 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 FLIIQ13045 1269 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 CCDC184Q52MB2 194 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 PRAMEF18Q5VWM3 479 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 MOB2Q70IA6 237 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 TXNRD3Q86VQ6 643 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 MPHOSPH8Q99549 860 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 PLA2G12BQ9BX93 195 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 ANKRD2Q9GZV1 360 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 MYH16Q9H6N6 1097 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 ZNF804BA4D1E1 1349 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 IL16Q14005 1332 aa19.98■□□□□ 0.79
LINC01116-202ENST00000339037 PDE4DIPQ5VU43 2346 aa19.97■□□□□ 0.79
LINC01116-202ENST00000339037 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
LINC01116-202ENST00000339037 MMP14P50281 582 aa19.97■□□□□ 0.79
LINC01116-202ENST00000339037 FKBP5Q13451 457 aaPredicted RBP19.97■□□□□ 0.79
LINC01116-202ENST00000339037 TTLL12Q14166 644 aaPredicted RBP19.97■□□□□ 0.79
LINC01116-202ENST00000339037 UBE2Q2LH0YL09 131 aa19.96■□□□□ 0.79
LINC01116-202ENST00000339037 SASH1O94885 1247 aa19.96■□□□□ 0.79
LINC01116-202ENST00000339037 KLRK1P26718 216 aa19.96■□□□□ 0.79
LINC01116-202ENST00000339037 NF2P35240 595 aa19.96■□□□□ 0.79
LINC01116-202ENST00000339037 TTLL5Q6EMB2 1281 aa19.96■□□□□ 0.79
LINC01116-202ENST00000339037 SPDYE2BA6NHP3 402 aa19.95■□□□□ 0.78
LINC01116-202ENST00000339037 SPDYE6P0CI01 402 aa19.95■□□□□ 0.78
LINC01116-202ENST00000339037 KCNJ4P48050 445 aa19.95■□□□□ 0.78
LINC01116-202ENST00000339037 VASPP50552 380 aaPredicted RBP19.95■□□□□ 0.78
LINC01116-202ENST00000339037 SPDYE2Q495Y8 402 aa19.95■□□□□ 0.78
LINC01116-202ENST00000339037 CTU1Q7Z7A3 348 aaKnown RBP19.95■□□□□ 0.78
LINC01116-202ENST00000339037 LINS1Q8NG48 757 aa19.95■□□□□ 0.78
LINC01116-202ENST00000339037 DNAAF4Q8WXU2 420 aa19.95■□□□□ 0.78
LINC01116-202ENST00000339037 CSF1RP07333 972 aa19.94■□□□□ 0.78
LINC01116-202ENST00000339037 CASP7P55210 303 aa19.94■□□□□ 0.78
LINC01116-202ENST00000339037 KIAA0825Q8IV33 1275 aa19.94■□□□□ 0.78
LINC01116-202ENST00000339037 HDAC9Q9UKV0 1011 aa19.94■□□□□ 0.78
LINC01116-202ENST00000339037 ZNF646O15015 1829 aaPredicted RBP19.94■□□□□ 0.78
LINC01116-202ENST00000339037 FANCIQ9NVI1 1328 aa19.94■□□□□ 0.78
LINC01116-202ENST00000339037 SLC34A2O95436 690 aa19.93■□□□□ 0.78
LINC01116-202ENST00000339037 GTF2IP78347 998 aa19.93■□□□□ 0.78
LINC01116-202ENST00000339037 CHRNDQ07001 517 aa19.93■□□□□ 0.78
LINC01116-202ENST00000339037 APOBEC3FQ8IUX4 373 aaKnown RBP19.93■□□□□ 0.78
LINC01116-202ENST00000339037 HTTP42858 3142 aa19.93■□□□□ 0.78
LINC01116-202ENST00000339037 SOX10P56693 466 aa19.92■□□□□ 0.78
LINC01116-202ENST00000339037 ANKRD18BA2A2Z9 1011 aa19.91■□□□□ 0.78
LINC01116-202ENST00000339037 SSUH2Q9Y2M2 353 aa19.91■□□□□ 0.78
LINC01116-202ENST00000339037 CACNA1FO60840 1977 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms