RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 FBXW7Q969H0 707 aa23.37■■□□□ 1.33
CDCA4-201ENST00000336219 GTPBP4Q9BZE4 634 aaKnown RBP23.37■■□□□ 1.33
CDCA4-201ENST00000336219 CCDC9Q9Y3X0 531 aaKnown RBP23.37■■□□□ 1.33
CDCA4-201ENST00000336219 GOLPH3LQ9H4A5 285 aa23.37■■□□□ 1.33
CDCA4-201ENST00000336219 ZSCAN16Q9H4T2 348 aaPredicted RBP23.37■■□□□ 1.33
CDCA4-201ENST00000336219 NUP188Q5SRE5 1749 aa23.37■■□□□ 1.33
CDCA4-201ENST00000336219 TJP1Q07157 1748 aa23.36■■□□□ 1.33
CDCA4-201ENST00000336219 NBPF26B4DH59 902 aa23.36■■□□□ 1.33
CDCA4-201ENST00000336219 HMGB1P09429 215 aaKnown RBP23.36■■□□□ 1.33
CDCA4-201ENST00000336219 SLFNL1Q499Z3 407 aa23.36■■□□□ 1.33
CDCA4-201ENST00000336219 NBPF14Q5TI25 921 aa23.36■■□□□ 1.33
CDCA4-201ENST00000336219 NBPF10Q6P3W6 841 aaKnown RBP23.36■■□□□ 1.33
CDCA4-201ENST00000336219 NBPF15Q8N660 670 aa23.36■■□□□ 1.33
CDCA4-201ENST00000336219 CCDC112Q8NEF3 446 aa23.36■■□□□ 1.33
CDCA4-201ENST00000336219 LLPHQ9BRT6 129 aaKnown RBP23.36■■□□□ 1.33
CDCA4-201ENST00000336219 PFKFB2O60825 505 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 ATF3P18847 181 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 DHX32Q7L7V1 743 aaKnown RBP23.35■■□□□ 1.33
CDCA4-201ENST00000336219 LRRC8AQ8IWT6 810 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 HELLSQ9NRZ9 838 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 PAG1Q9NWQ8 432 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 GOLGA6L19H0YKK7 550 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 GOLIM4O00461 696 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 FGD1P98174 961 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 NEUROD6Q96NK8 337 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 GPR108Q9NPR9 543 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.35■■□□□ 1.33
CDCA4-201ENST00000336219 CTNNA3Q9UI47 895 aa23.35■■□□□ 1.33
CDCA4-201ENST00000336219 V9GYY5 206 aaPredicted RBP23.35■■□□□ 1.33
CDCA4-201ENST00000336219 CEP135Q66GS9 1140 aa23.34■■□□□ 1.33
CDCA4-201ENST00000336219 CCAR1Q8IX12 1150 aaKnown RBP23.34■■□□□ 1.33
CDCA4-201ENST00000336219 DSCC1Q9BVC3 393 aa23.34■■□□□ 1.33
CDCA4-201ENST00000336219 ADD1P35611 737 aaKnown RBP23.34■■□□□ 1.33
CDCA4-201ENST00000336219 CFAP45Q9UL16 551 aa23.34■■□□□ 1.33
CDCA4-201ENST00000336219 FILIP1Q7Z7B0 1213 aa23.33■■□□□ 1.33
CDCA4-201ENST00000336219 NSUN7Q8NE18 718 aaKnown RBP23.33■■□□□ 1.33
CDCA4-201ENST00000336219 TNS3Q68CZ2 1445 aa23.33■■□□□ 1.33
CDCA4-201ENST00000336219 TIMM10P62072 90 aa23.33■■□□□ 1.33
CDCA4-201ENST00000336219 CWC25Q9NXE8 425 aaPredicted RBP23.33■■□□□ 1.33
CDCA4-201ENST00000336219 TRMT1Q9NXH9 659 aaKnown RBP23.33■■□□□ 1.33
CDCA4-201ENST00000336219 ZMYM1Q5SVZ6 1142 aa23.32■■□□□ 1.32
CDCA4-201ENST00000336219 TTLL7Q6ZT98 887 aa23.32■■□□□ 1.32
CDCA4-201ENST00000336219 TICAM2Q86XR7 235 aa23.32■■□□□ 1.32
CDCA4-201ENST00000336219 UBR2Q8IWV8 1755 aa23.32■■□□□ 1.32
CDCA4-201ENST00000336219 IL15P40933 162 aaPredicted RBP23.32■■□□□ 1.32
CDCA4-201ENST00000336219 GUCY1B3Q02153 619 aa23.32■■□□□ 1.32
CDCA4-201ENST00000336219 AGXT2Q9BYV1 514 aa23.32■■□□□ 1.32
CDCA4-201ENST00000336219 EXOSC10Q01780 885 aaKnown RBP23.31■■□□□ 1.32
CDCA4-201ENST00000336219 PAXBP1Q9Y5B6 917 aa23.31■■□□□ 1.32
CDCA4-201ENST00000336219 TMEM94Q12767 1356 aa23.31■■□□□ 1.32
CDCA4-201ENST00000336219 A0A0G2JLW4 131 aa23.31■■□□□ 1.32
CDCA4-201ENST00000336219 CTDNEP1O95476 244 aa23.31■■□□□ 1.32
CDCA4-201ENST00000336219 CCT2P78371 535 aaKnown RBP23.31■■□□□ 1.32
CDCA4-201ENST00000336219 NAA16Q6N069 864 aaPredicted RBP23.31■■□□□ 1.32
CDCA4-201ENST00000336219 SPEF2Q9C093 1822 aa23.3■■□□□ 1.32
CDCA4-201ENST00000336219 CDC25BP30305 580 aa23.3■■□□□ 1.32
CDCA4-201ENST00000336219 APOBRQ0VD83 1088 aa23.3■■□□□ 1.32
CDCA4-201ENST00000336219 USP28Q96RU2 1077 aa23.3■■□□□ 1.32
CDCA4-201ENST00000336219 OGFRQ9NZT2 677 aa23.3■■□□□ 1.32
CDCA4-201ENST00000336219 SKILP12757 684 aa23.3■■□□□ 1.32
CDCA4-201ENST00000336219 SNW1Q13573 536 aaKnown RBP23.3■■□□□ 1.32
CDCA4-201ENST00000336219 DHX40Q8IX18 779 aaKnown RBP23.3■■□□□ 1.32
CDCA4-201ENST00000336219 FEZ1Q99689 392 aa23.3■■□□□ 1.32
CDCA4-201ENST00000336219 NCOA5Q9HCD5 579 aaKnown RBP23.3■■□□□ 1.32
CDCA4-201ENST00000336219 DCCP43146 1447 aa23.29■■□□□ 1.32
CDCA4-201ENST00000336219 PTPDC1A2A3K4 754 aa23.29■■□□□ 1.32
CDCA4-201ENST00000336219 HSPD1P10809 573 aaKnown RBP23.29■■□□□ 1.32
CDCA4-201ENST00000336219 CCDC69A6NI79 296 aa23.29■■□□□ 1.32
CDCA4-201ENST00000336219 STX1AQ16623 288 aa23.29■■□□□ 1.32
CDCA4-201ENST00000336219 LRRC24Q50LG9 513 aa23.29■■□□□ 1.32
CDCA4-201ENST00000336219 NAP1L2Q9ULW6 460 aaPredicted RBP23.29■■□□□ 1.32
CDCA4-201ENST00000336219 CPDO75976 1380 aa23.28■■□□□ 1.32
CDCA4-201ENST00000336219 MAST3O60307 1309 aa23.28■■□□□ 1.32
CDCA4-201ENST00000336219 BECN2A8MW95 431 aa23.28■■□□□ 1.32
CDCA4-201ENST00000336219 E7EWF7 191 aa23.28■■□□□ 1.32
CDCA4-201ENST00000336219 EYA2O00167 538 aa23.28■■□□□ 1.32
CDCA4-201ENST00000336219 SYCP1Q15431 976 aa23.28■■□□□ 1.32
CDCA4-201ENST00000336219 SARM1Q6SZW1 724 aa23.28■■□□□ 1.32
CDCA4-201ENST00000336219 ZNF215Q9UL58 517 aaPredicted RBP23.28■■□□□ 1.32
CDCA4-201ENST00000336219 IFIT1P09914 478 aaKnown RBP23.27■■□□□ 1.32
CDCA4-201ENST00000336219 CCZ1BP86790 482 aa23.27■■□□□ 1.32
CDCA4-201ENST00000336219 CCZ1P86791 482 aaPredicted RBP23.27■■□□□ 1.32
CDCA4-201ENST00000336219 CHST3Q7LGC8 479 aa23.27■■□□□ 1.32
CDCA4-201ENST00000336219 MRFAP1L1Q96HT8 127 aa23.27■■□□□ 1.32
CDCA4-201ENST00000336219 ZNF594Q96JF6 807 aaPredicted RBP23.27■■□□□ 1.32
CDCA4-201ENST00000336219 RCOR1Q9UKL0 485 aa23.27■■□□□ 1.32
CDCA4-201ENST00000336219 SALL1Q9NSC2 1324 aa23.27■■□□□ 1.32
CDCA4-201ENST00000336219 AOPEPQ8N6M6 819 aa23.27■■□□□ 1.32
CDCA4-201ENST00000336219 CCDC191Q8NCU4 936 aa23.27■■□□□ 1.32
CDCA4-201ENST00000336219 CGNQ9P2M7 1197 aaKnown RBP23.27■■□□□ 1.32
CDCA4-201ENST00000336219 A0A1B0GUL7 405 aa23.26■■□□□ 1.31
CDCA4-201ENST00000336219 RNF113AO15541 343 aaKnown RBP23.26■■□□□ 1.31
CDCA4-201ENST00000336219 CAVIN2O95810 425 aa23.26■■□□□ 1.31
CDCA4-201ENST00000336219 PTPN14Q15678 1187 aa23.26■■□□□ 1.31
CDCA4-201ENST00000336219 STRCP1A6NGW2 1772 aa23.26■■□□□ 1.31
CDCA4-201ENST00000336219 CIAO1O76071 339 aa23.26■■□□□ 1.31
CDCA4-201ENST00000336219 A1BGP04217 495 aa23.26■■□□□ 1.31
CDCA4-201ENST00000336219 RBM6P78332 1123 aaKnown RBP23.26■■□□□ 1.31
CDCA4-201ENST00000336219 ZBTB3Q9H5J0 574 aa23.26■■□□□ 1.31
CDCA4-201ENST00000336219 DDX41Q9UJV9 622 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms