RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 ERCC4Q92889 916 aaPredicted RBP7.53□□□□□ -1.2
HMG20A-201ENST00000336216 USP6P35125 1406 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 A0A087WWV3 80 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 SSBP05455 408 aaKnown RBP eCLIP7.53□□□□□ -1.2
HMG20A-201ENST00000336216 TMEM67Q5HYA8 995 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 FAM200AQ8TCP9 573 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 NAT10Q9H0A0 1025 aaKnown RBP7.53□□□□□ -1.2
HMG20A-201ENST00000336216 MKNK2Q9HBH9 465 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 SLC12A7Q9Y666 1083 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 CCDC66A2RUB6 948 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF853P0CG23 659 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 GTF2F1P35269 517 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 SLFNL1Q499Z3 407 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 CEP135Q66GS9 1140 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 FSIP1Q8NA03 581 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 METTL22Q9BUU2 404 aaPredicted RBP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 BRMS1Q9HCU9 246 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 PRDM4Q9UKN5 801 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 ASAP1Q9ULH1 1129 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 SNX14Q9Y5W7 946 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 ZBTB22O15209 634 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 SGSM2O43147 1006 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 CYP2E1P05181 493 aaPredicted RBP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 SLC5A1P13866 664 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 IL15P40933 162 aaPredicted RBP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 BEND3Q5T5X7 828 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 ARHGEF25Q86VW2 580 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 NBPF5PQ86XG9 351 aaPredicted RBP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 DZIP1Q86YF9 867 aaKnown RBP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 RASEFQ8IZ41 740 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 INTS4Q96HW7 963 aaKnown RBP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 SLC26A6Q9BXS9 759 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 GTPBP4Q9BZE4 634 aaKnown RBP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 SCAND2PQ9GZW5 306 aaPredicted RBP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 STX8Q9UNK0 236 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 PRDM1O75626 825 aa7.52□□□□□ -1.21
HMG20A-201ENST00000336216 HOOK1Q9UJC3 728 aaKnown RBP7.52□□□□□ -1.21
HMG20A-201ENST00000336216 GOLGA8AA7E2F4 631 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 LIG1P18858 919 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 LRRC24Q50LG9 513 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 TNNI3KQ59H18 835 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF652Q9Y2D9 606 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 FPGT-TNNI3KV9GXZ4 949 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 MAP2P11137 1827 aaKnown RBP7.51□□□□□ -1.21
HMG20A-201ENST00000336216 ADGRB2O60241 1585 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 ADGRL3Q9HAR2 1447 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 NCOA3Q9Y6Q9 1424 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 CCDC171Q6TFL3 1326 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 NEURL1BA8MQ27 555 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 TPM1P09493 284 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 SKILP12757 684 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 PHKG2P15735 406 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 CYP7A1P22680 504 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 FAM98CQ17RN3 349 aaKnown RBP7.51□□□□□ -1.21
HMG20A-201ENST00000336216 GTF3C6Q969F1 213 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 MYL10Q9BUA6 226 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 PUS3Q9BZE2 481 aaKnown RBP7.51□□□□□ -1.21
HMG20A-201ENST00000336216 A0A0D9SFI3 127 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 SNAP23O00161 211 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 MPHOSPH10O00566 681 aaKnown RBP7.51□□□□□ -1.21
HMG20A-201ENST00000336216 JAK2O60674 1132 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 ITGA6P23229 1130 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 ADCK5Q3MIX3 580 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 CFAP100Q494V2 611 aa7.51□□□□□ -1.21
HMG20A-201ENST00000336216 TMEM94Q12767 1356 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 SLC3A2P08195 630 aaKnown RBP7.5□□□□□ -1.21
HMG20A-201ENST00000336216 IARSP41252 1262 aaKnown RBP7.5□□□□□ -1.21
HMG20A-201ENST00000336216 NAP1L1P55209 391 aaKnown RBP7.5□□□□□ -1.21
HMG20A-201ENST00000336216 SSH3Q8TE77 659 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 CPLX3Q8WVH0 158 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 KIF20BQ96Q89 1820 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 KIAA0232Q92628 1395 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 ITSN1Q15811 1721 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.5□□□□□ -1.21
HMG20A-201ENST00000336216 IGSF1Q8N6C5 1336 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 hCG_1642624A0A1W2PR95 340 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 RFC4P35249 363 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 METAP2P50579 478 aaKnown RBP eCLIP7.5□□□□□ -1.21
HMG20A-201ENST00000336216 ANAPC15P60006 121 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 PI16Q6UXB8 463 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF710Q8N1W2 664 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 MAGEB6Q8N7X4 407 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 JMYQ8N9B5 988 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 SLC4A4Q9Y6R1 1079 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 IQSEC2Q5JU85 1478 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 PRC1O43663 620 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 LARGE1O95461 756 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 ZSCAN20P17040 1043 aaPredicted RBP7.5□□□□□ -1.21
HMG20A-201ENST00000336216 CLEC17AQ6ZS10 378 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 MFSD6Q6ZSS7 791 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 CCAR1Q8IX12 1150 aaKnown RBP7.5□□□□□ -1.21
HMG20A-201ENST00000336216 CEP57L1Q8IYX8 460 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 PLBD2Q8NHP8 589 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 NCOA7Q8NI08 942 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 KIF18AQ8NI77 898 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 TEX13AQ9BXU3 409 aaPredicted RBP7.5□□□□□ -1.21
HMG20A-201ENST00000336216 CBX8Q9HC52 389 aa7.5□□□□□ -1.21
HMG20A-201ENST00000336216 CDK12Q9NYV4 1490 aaPredicted RBP7.5□□□□□ -1.21
HMG20A-201ENST00000336216 EYA2O00167 538 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 ELF2Q15723 593 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms