RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 BCL11AQ9H165 835 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 VPS33BQ9H267 617 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 IL1RAPL2Q9NP60 686 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 SBF1O95248 1867 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 TIMM10P62072 90 aa17.36■□□□□ 0.37
APOBEC3B-202ENST00000335760 TNNI3KQ59H18 835 aa17.36■□□□□ 0.37
APOBEC3B-202ENST00000335760 TXNRD3Q86VQ6 643 aa17.36■□□□□ 0.37
APOBEC3B-202ENST00000335760 LRRCC1Q9C099 1032 aa17.36■□□□□ 0.37
APOBEC3B-202ENST00000335760 GPR108Q9NPR9 543 aa17.36■□□□□ 0.37
APOBEC3B-202ENST00000335760 FPGT-TNNI3KV9GXZ4 949 aa17.36■□□□□ 0.37
APOBEC3B-202ENST00000335760 IRS2Q9Y4H2 1338 aa17.35■□□□□ 0.37
APOBEC3B-202ENST00000335760 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
APOBEC3B-202ENST00000335760 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
APOBEC3B-202ENST00000335760 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
APOBEC3B-202ENST00000335760 C15orf52Q6ZUT6 534 aaKnown RBP17.35■□□□□ 0.37
APOBEC3B-202ENST00000335760 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
APOBEC3B-202ENST00000335760 RNF181Q9P0P0 153 aa17.35■□□□□ 0.37
APOBEC3B-202ENST00000335760 ZNF609O15014 1411 aa17.35■□□□□ 0.37
APOBEC3B-202ENST00000335760 UTRNP46939 3433 aa17.35■□□□□ 0.37
APOBEC3B-202ENST00000335760 G3V3G9 751 aa17.34■□□□□ 0.37
APOBEC3B-202ENST00000335760 DCAF8Q5TAQ9 597 aa17.34■□□□□ 0.37
APOBEC3B-202ENST00000335760 C9orf131Q5VYM1 1079 aa17.34■□□□□ 0.37
APOBEC3B-202ENST00000335760 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
APOBEC3B-202ENST00000335760 ADORA1P30542 326 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 GYG1P46976 350 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 CAVIN4Q5BKX8 364 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 ANKRD45Q5TZF3 282 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 B4GALNT3Q6L9W6 998 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 AACSQ86V21 672 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 SMC5Q8IY18 1101 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 NIM1KQ8IY84 436 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 EAF2Q96CJ1 260 aaPredicted RBP17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 XAGE2Q96GT9 111 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 DBNDD1Q9H9R9 158 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 COL4A5P29400 1685 aa17.33■□□□□ 0.36
APOBEC3B-202ENST00000335760 ZNF804AQ7Z570 1209 aa17.32■□□□□ 0.36
APOBEC3B-202ENST00000335760 JDP2Q8WYK2 163 aa17.32■□□□□ 0.36
APOBEC3B-202ENST00000335760 CCDC136Q96JN2 1154 aa17.32■□□□□ 0.36
APOBEC3B-202ENST00000335760 FAM84BQ96KN1 310 aaPredicted RBP17.32■□□□□ 0.36
APOBEC3B-202ENST00000335760 CCDC8Q9H0W5 538 aaPredicted RBP17.32■□□□□ 0.36
APOBEC3B-202ENST00000335760 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
APOBEC3B-202ENST00000335760 DICER1Q9UPY3 1922 aaKnown RBP17.32■□□□□ 0.36
APOBEC3B-202ENST00000335760 ARAP2Q8WZ64 1704 aa17.32■□□□□ 0.36
APOBEC3B-202ENST00000335760 ECE2O60344 883 aa17.31■□□□□ 0.36
APOBEC3B-202ENST00000335760 HIBADHP31937 336 aaKnown RBP17.31■□□□□ 0.36
APOBEC3B-202ENST00000335760 BCAMP50895 628 aa17.31■□□□□ 0.36
APOBEC3B-202ENST00000335760 GORABQ5T7V8 394 aa17.31■□□□□ 0.36
APOBEC3B-202ENST00000335760 FBXO33Q7Z6M2 555 aa17.31■□□□□ 0.36
APOBEC3B-202ENST00000335760 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
APOBEC3B-202ENST00000335760 COA1Q9GZY4 146 aa17.31■□□□□ 0.36
APOBEC3B-202ENST00000335760 PPP4R2Q9NY27 417 aa17.31■□□□□ 0.36
APOBEC3B-202ENST00000335760 IFIT2P09913 472 aaKnown RBP17.3■□□□□ 0.36
APOBEC3B-202ENST00000335760 DBNDD2Q9BQY9 259 aa17.3■□□□□ 0.36
APOBEC3B-202ENST00000335760 TLR7Q9NYK1 1049 aaKnown RBP17.3■□□□□ 0.36
APOBEC3B-202ENST00000335760 ZNRF3Q9ULT6 936 aa17.3■□□□□ 0.36
APOBEC3B-202ENST00000335760 CD209Q9NNX6 404 aa17.29■□□□□ 0.36
APOBEC3B-202ENST00000335760 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
APOBEC3B-202ENST00000335760 TIAM2Q8IVF5 1701 aa17.29■□□□□ 0.36
APOBEC3B-202ENST00000335760 YDJCA8MPS7 323 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 PHKA1P46020 1223 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 CCDC102BQ68D86 513 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 CENPQQ7L2Z9 268 aaPredicted RBP17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 CHD4Q14839 1912 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 FZD9O00144 591 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 IL1R1P14778 569 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 NUCB1Q02818 461 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 PODNQ7Z5L7 613 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 CHD1LQ86WJ1 897 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 LNPKQ9C0E8 428 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 KCNQ5Q9NR82 932 aa17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 GNL3LQ9NVN8 582 aaKnown RBP17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
APOBEC3B-202ENST00000335760 KDM2BQ8NHM5 1336 aa17.27■□□□□ 0.36
APOBEC3B-202ENST00000335760 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.35
APOBEC3B-202ENST00000335760 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.35
APOBEC3B-202ENST00000335760 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.35
APOBEC3B-202ENST00000335760 TTC39AQ5SRH9 613 aa17.27■□□□□ 0.35
APOBEC3B-202ENST00000335760 TDRD7Q8NHU6 1098 aaKnown RBP17.27■□□□□ 0.35
APOBEC3B-202ENST00000335760 FBXW7Q969H0 707 aa17.27■□□□□ 0.35
APOBEC3B-202ENST00000335760 RAD17O75943 681 aa17.26■□□□□ 0.35
APOBEC3B-202ENST00000335760 ZNF541Q9H0D2 1346 aa17.25■□□□□ 0.35
APOBEC3B-202ENST00000335760 ZC3H4Q9UPT8 1303 aaKnown RBP17.25■□□□□ 0.35
APOBEC3B-202ENST00000335760 UQCRFS1P1P0C7P4 283 aa17.25■□□□□ 0.35
APOBEC3B-202ENST00000335760 CXCL9Q07325 125 aa17.25■□□□□ 0.35
APOBEC3B-202ENST00000335760 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
APOBEC3B-202ENST00000335760 SCN9AQ15858 1988 aa17.25■□□□□ 0.35
APOBEC3B-202ENST00000335760 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 ARID4AP29374 1257 aaPredicted RBP17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 GTF2IP78347 998 aa17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 CHAF1AQ13111 956 aaPredicted RBP17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 TTLL5Q6EMB2 1281 aa17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 CIAPIN1Q6FI81 312 aa17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 OTUD7AQ8TE49 926 aaPredicted RBP17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 JAG2Q9Y219 1238 aa17.24■□□□□ 0.35
APOBEC3B-202ENST00000335760 PSMD14O00487 310 aa17.23■□□□□ 0.35
APOBEC3B-202ENST00000335760 SEMA3EO15041 775 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms