RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 KLRK1P26718 216 aa26.36■■□□□ 1.81
TPM1-204ENST00000334895 PIM2Q9P1W9 311 aa26.36■■□□□ 1.81
TPM1-204ENST00000334895 AOX1Q06278 1338 aa26.35■■□□□ 1.81
TPM1-204ENST00000334895 ZNF219Q9P2Y4 722 aaPredicted RBP26.35■■□□□ 1.81
TPM1-204ENST00000334895 LEMD3Q9Y2U8 911 aa26.35■■□□□ 1.81
TPM1-204ENST00000334895 IFIT1P09914 478 aaKnown RBP26.34■■□□□ 1.81
TPM1-204ENST00000334895 GSPT1P15170 499 aaKnown RBP26.33■■□□□ 1.81
TPM1-204ENST00000334895 KCNJ4P48050 445 aa26.33■■□□□ 1.81
TPM1-204ENST00000334895 TTC22Q5TAA0 569 aa26.33■■□□□ 1.81
TPM1-204ENST00000334895 POLLQ9UGP5 575 aa26.33■■□□□ 1.81
TPM1-204ENST00000334895 TBC1D16Q8TBP0 767 aa26.32■■□□□ 1.8
TPM1-204ENST00000334895 GPATCH3Q96I76 525 aa26.32■■□□□ 1.8
TPM1-204ENST00000334895 GPR101Q96P66 508 aaPredicted RBP26.32■■□□□ 1.8
TPM1-204ENST00000334895 C21orf2O43822 256 aa26.32■■□□□ 1.8
TPM1-204ENST00000334895 UFL1O94874 794 aa26.32■■□□□ 1.8
TPM1-204ENST00000334895 YBX3P16989 372 aaKnown RBP eCLIP26.32■■□□□ 1.8
TPM1-204ENST00000334895 ATP2B4P23634 1241 aa26.32■■□□□ 1.8
TPM1-204ENST00000334895 TXNRD3Q86VQ6 643 aa26.32■■□□□ 1.8
TPM1-204ENST00000334895 MPNDQ8N594 471 aa26.32■■□□□ 1.8
TPM1-204ENST00000334895 GGA1Q9UJY5 639 aa26.32■■□□□ 1.8
TPM1-204ENST00000334895 PHKA1P46020 1223 aa26.31■■□□□ 1.8
TPM1-204ENST00000334895 GPR162Q16538 588 aa26.31■■□□□ 1.8
TPM1-204ENST00000334895 BCS1LQ9Y276 419 aa26.31■■□□□ 1.8
TPM1-204ENST00000334895 ATP5JP18859 108 aa26.3■■□□□ 1.8
TPM1-204ENST00000334895 DALRD3Q5D0E6 543 aaKnown RBP26.3■■□□□ 1.8
TPM1-204ENST00000334895 CCDC102BQ68D86 513 aa26.3■■□□□ 1.8
TPM1-204ENST00000334895 GLRX3O76003 335 aaKnown RBP26.29■■□□□ 1.8
TPM1-204ENST00000334895 GYG1P46976 350 aa26.29■■□□□ 1.8
TPM1-204ENST00000334895 BCAMP50895 628 aa26.29■■□□□ 1.8
TPM1-204ENST00000334895 GORABQ5T7V8 394 aa26.29■■□□□ 1.8
TPM1-204ENST00000334895 DPP8Q6V1X1 898 aaPredicted RBP26.29■■□□□ 1.8
TPM1-204ENST00000334895 FAM84BQ96KN1 310 aaPredicted RBP26.29■■□□□ 1.8
TPM1-204ENST00000334895 CC2D2BQ6DHV5 1058 aa26.28■■□□□ 1.8
TPM1-204ENST00000334895 C15orf52Q6ZUT6 534 aaKnown RBP26.28■■□□□ 1.8
TPM1-204ENST00000334895 TMX4Q9H1E5 349 aaPredicted RBP26.28■■□□□ 1.8
TPM1-204ENST00000334895 AKAP11Q9UKA4 1901 aa26.28■■□□□ 1.8
TPM1-204ENST00000334895 ERC2O15083 957 aa26.28■■□□□ 1.8
TPM1-204ENST00000334895 BMP2KLQ5H9B9 411 aa26.28■■□□□ 1.8
TPM1-204ENST00000334895 CCDC158Q5M9N0 1113 aa26.28■■□□□ 1.8
TPM1-204ENST00000334895 BOLA2Q9H3K6 86 aa26.28■■□□□ 1.8
TPM1-204ENST00000334895 SCARF1Q14162 830 aa26.27■■□□□ 1.8
TPM1-204ENST00000334895 TTC39AQ5SRH9 613 aa26.27■■□□□ 1.8
TPM1-204ENST00000334895 FBXO33Q7Z6M2 555 aa26.27■■□□□ 1.8
TPM1-204ENST00000334895 CHD4Q14839 1912 aa26.26■■□□□ 1.8
TPM1-204ENST00000334895 C6orf229H3BNL8 230 aa26.26■■□□□ 1.79
TPM1-204ENST00000334895 ARID4AP29374 1257 aaPredicted RBP26.26■■□□□ 1.79
TPM1-204ENST00000334895 CCDC93Q567U6 631 aa26.26■■□□□ 1.79
TPM1-204ENST00000334895 ZNF512BQ96KM6 892 aaPredicted RBP26.26■■□□□ 1.79
TPM1-204ENST00000334895 RTFDC1Q9BY42 306 aaPredicted RBP26.26■■□□□ 1.79
TPM1-204ENST00000334895 MED23Q9ULK4 1368 aa26.26■■□□□ 1.79
TPM1-204ENST00000334895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.25■■□□□ 1.79
TPM1-204ENST00000334895 NDUFB9Q9Y6M9 179 aa26.25■■□□□ 1.79
TPM1-204ENST00000334895 MAP4K4O95819 1239 aaPredicted RBP26.25■■□□□ 1.79
TPM1-204ENST00000334895 MCAMP43121 646 aa26.25■■□□□ 1.79
TPM1-204ENST00000334895 DCAF8L1A6NGE4 600 aa26.24■■□□□ 1.79
TPM1-204ENST00000334895 CAVIN4Q5BKX8 364 aa26.24■■□□□ 1.79
TPM1-204ENST00000334895 PI16Q6UXB8 463 aa26.24■■□□□ 1.79
TPM1-204ENST00000334895 HAUS7Q99871 368 aa26.24■■□□□ 1.79
TPM1-204ENST00000334895 CCDC88AQ3V6T2 1871 aa26.23■■□□□ 1.79
TPM1-204ENST00000334895 SDSP20132 328 aa26.23■■□□□ 1.79
TPM1-204ENST00000334895 FER1L6Q2WGJ9 1857 aa26.23■■□□□ 1.79
TPM1-204ENST00000334895 COL1A1P02452 1464 aaPredicted RBP26.23■■□□□ 1.79
TPM1-204ENST00000334895 UQCRFS1P1P0C7P4 283 aa26.22■■□□□ 1.79
TPM1-204ENST00000334895 HIBADHP31937 336 aaKnown RBP26.22■■□□□ 1.79
TPM1-204ENST00000334895 RASGRF1Q13972 1273 aa26.22■■□□□ 1.79
TPM1-204ENST00000334895 EDC3Q96F86 508 aaKnown RBP26.22■■□□□ 1.79
TPM1-204ENST00000334895 GRIPAP1Q4V328 841 aa26.21■■□□□ 1.79
TPM1-204ENST00000334895 SOGA3Q5TF21 947 aa26.21■■□□□ 1.79
TPM1-204ENST00000334895 RTKN2Q8IZC4 609 aa26.21■■□□□ 1.79
TPM1-204ENST00000334895 SNRKQ9NRH2 765 aa26.21■■□□□ 1.79
TPM1-204ENST00000334895 DNAJC2Q99543 621 aaKnown RBP26.21■■□□□ 1.79
TPM1-204ENST00000334895 HMG20BQ9P0W2 317 aa26.21■■□□□ 1.79
TPM1-204ENST00000334895 IQSEC3Q9UPP2 1182 aaPredicted RBP26.21■■□□□ 1.79
TPM1-204ENST00000334895 AK9Q5TCS8 1911 aa26.2■■□□□ 1.79
TPM1-204ENST00000334895 RIMBP2O15034 1052 aa26.2■■□□□ 1.78
TPM1-204ENST00000334895 VPS37DQ86XT2 251 aa26.2■■□□□ 1.78
TPM1-204ENST00000334895 PSMD1Q99460 953 aa26.2■■□□□ 1.78
TPM1-204ENST00000334895 MYH13Q9UKX3 1938 aa26.2■■□□□ 1.78
TPM1-204ENST00000334895 SBF1O95248 1867 aa26.2■■□□□ 1.78
TPM1-204ENST00000334895 WASHC4Q2M389 1173 aa26.19■■□□□ 1.78
TPM1-204ENST00000334895 TRIM6-TRIM34B2RNG4 842 aa26.18■■□□□ 1.78
TPM1-204ENST00000334895 ZAP70P43403 619 aa26.18■■□□□ 1.78
TPM1-204ENST00000334895 ZNF804AQ7Z570 1209 aa26.18■■□□□ 1.78
TPM1-204ENST00000334895 EYA3Q99504 573 aa26.18■■□□□ 1.78
TPM1-204ENST00000334895 GNL3LQ9NVN8 582 aaKnown RBP26.18■■□□□ 1.78
TPM1-204ENST00000334895 ZBTB22O15209 634 aa26.17■■□□□ 1.78
TPM1-204ENST00000334895 SPATA5Q8NB90 893 aa26.17■■□□□ 1.78
TPM1-204ENST00000334895 ZC3H12CQ9C0D7 883 aaKnown RBP26.17■■□□□ 1.78
TPM1-204ENST00000334895 ANTXR1Q9H6X2 564 aa26.17■■□□□ 1.78
TPM1-204ENST00000334895 CD209Q9NNX6 404 aa26.17■■□□□ 1.78
TPM1-204ENST00000334895 GRIN3BO60391 1043 aa26.17■■□□□ 1.78
TPM1-204ENST00000334895 FKBP4Q02790 459 aaKnown RBP eCLIP26.17■■□□□ 1.78
TPM1-204ENST00000334895 SUPT20HQ8NEM7 779 aa26.17■■□□□ 1.78
TPM1-204ENST00000334895 TDRD7Q8NHU6 1098 aaKnown RBP26.17■■□□□ 1.78
TPM1-204ENST00000334895 RILPL2Q969X0 211 aa26.17■■□□□ 1.78
TPM1-204ENST00000334895 PAG1Q9NWQ8 432 aa26.17■■□□□ 1.78
TPM1-204ENST00000334895 NFKBIEO00221 500 aa26.16■■□□□ 1.78
TPM1-204ENST00000334895 GOLIM4O00461 696 aa26.16■■□□□ 1.78
TPM1-204ENST00000334895 IL1R1P14778 569 aa26.16■■□□□ 1.78
TPM1-204ENST00000334895 SEMA3EO15041 775 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms