RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 MKRN1Q9UHC7 482 aaKnown RBP11.1□□□□□ -0.63
COL4A6-201ENST00000334504 NCOA2Q15596 1464 aa11.1□□□□□ -0.63
COL4A6-201ENST00000334504 HGSO14964 777 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-201ENST00000334504 NCOA7Q8NI08 942 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 SSX2IPQ9Y2D8 614 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 MRVI1Q9Y6F6 885 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 NDC80O14777 642 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 STX17P56962 302 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 ARHGEF2Q92974 986 aaKnown RBP11.09□□□□□ -0.63
COL4A6-201ENST00000334504 LRRC2Q9BYS8 371 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 RABGAP1Q9Y3P9 1069 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 SDSP20132 328 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 DHX58Q96C10 678 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 VAT1LQ9HCJ6 419 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 RAD54L2Q9Y4B4 1467 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 TSGA10Q9BZW7 698 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 KLF18A0A0U1RQI7 1052 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 TBCAO75347 108 aaKnown RBP11.09□□□□□ -0.63
COL4A6-201ENST00000334504 EEF2P13639 858 aaKnown RBP11.09□□□□□ -0.63
COL4A6-201ENST00000334504 CCDC38Q502W7 563 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 CRACR2BQ8N4Y2 399 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-201ENST00000334504 TTC21AQ8NDW8 1320 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 PSMA7O14818 248 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 ZNF131P52739 623 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 RPAINQ86UA6 219 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 SYNCQ9H7C4 482 aa11.09□□□□□ -0.63
COL4A6-201ENST00000334504 CCDC122Q5T0U0 273 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 CCDC174Q6PII3 467 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL4A6-201ENST00000334504 FYB2Q5VWT5 728 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 TCEANC2Q96MN5 208 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 NAPGQ99747 312 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-201ENST00000334504 KIAA1107Q9UPP5 1409 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 GIGYF1O75420 1035 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-201ENST00000334504 CEP128Q6ZU80 1094 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 TTC36A6NLP5 189 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 WDHD1O75717 1129 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-201ENST00000334504 ATP5DP30049 168 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 CAVIN4Q5BKX8 364 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 AP1ARQ63HQ0 302 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 DDX27Q96GQ7 796 aaKnown RBP11.08□□□□□ -0.64
COL4A6-201ENST00000334504 EHMT1Q9H9B1 1298 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 PLCB3Q01970 1234 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 SMC5Q8IY18 1101 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 VTI1AQ96AJ9 217 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 BAIAP2L1Q9UHR4 511 aa11.08□□□□□ -0.64
COL4A6-201ENST00000334504 AKR1B15C9JRZ8 316 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-201ENST00000334504 TXNDC9O14530 226 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 ZSCAN26Q16670 478 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-201ENST00000334504 WHAMMP3Q1A5X7 153 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 NEK11Q8NG66 645 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 MICAL1Q8TDZ2 1067 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 LRRC45Q96CN5 670 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 GBP5Q96PP8 586 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 TCHPQ9BT92 498 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 Q6ZUG5 572 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 CCDC170Q8IYT3 715 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 SMC1BQ8NDV3 1235 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 TACO1Q9BSH4 297 aaKnown RBP11.07□□□□□ -0.64
COL4A6-201ENST00000334504 ATP6V1AP38606 617 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 ASIC1P78348 528 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 SF3A3Q12874 501 aaKnown RBP eCLIP11.07□□□□□ -0.64
COL4A6-201ENST00000334504 MCUR1Q96AQ8 359 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 ABCC11Q96J66 1382 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 SPTLC2O15270 562 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 CALCOCO2Q13137 446 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-201ENST00000334504 RNF10Q8N5U6 811 aaKnown RBP11.07□□□□□ -0.64
COL4A6-201ENST00000334504 CABS1Q96KC9 395 aa11.07□□□□□ -0.64
COL4A6-201ENST00000334504 ATP2A2P16615 1042 aaKnown RBP11.06□□□□□ -0.64
COL4A6-201ENST00000334504 DIXDC1Q155Q3 683 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 UAP1Q16222 522 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-201ENST00000334504 CERS3Q8IU89 383 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 ZGPATQ8N5A5 531 aaKnown RBP11.06□□□□□ -0.64
COL4A6-201ENST00000334504 BICD1Q96G01 975 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 ESYT1Q9BSJ8 1104 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 CAPN7Q9Y6W3 813 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL4A6-201ENST00000334504 MFSD6Q6ZSS7 791 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 CCDC26Q8TAB7 109 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 KAT14Q9H8E8 782 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 C8orf74Q6P047 294 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 E7EVH7 732 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 MRPS9P82933 396 aaKnown RBP11.06□□□□□ -0.64
COL4A6-201ENST00000334504 GOLGA6BA6NDN3 693 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 SLC5A1P13866 664 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 PTPRCP08575 1304 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 A6NNZ2 444 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 TUBB8Q3ZCM7 444 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 VSIG1Q86XK7 387 aa11.06□□□□□ -0.64
COL4A6-201ENST00000334504 TRIM68Q6AZZ1 485 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 CNGA4Q8IV77 575 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 HFM1A2PYH4 1435 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 PEX19P40855 299 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 UTP14CQ5TAP6 766 aaKnown RBP11.05□□□□□ -0.64
COL4A6-201ENST00000334504 STK38LQ9Y2H1 464 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 FRMD3A2A2Y4 597 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms