RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 LMAN2LQ9H0V9 348 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 TAOK3Q9H2K8 898 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 NMRK2Q9NPI5 230 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 SYNPO2Q9UMS6 1093 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 ERC2O15083 957 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 FOXO3O43524 673 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 DPEP1P16444 411 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 HOXC9P31274 260 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 IARSP41252 1262 aaKnown RBP2.34□□□□□ -2.03
LINC00643-201ENST00000334389 NT5C2P49902 561 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 PDXDC1Q6P996 788 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 INTS5Q6P9B9 1019 aaKnown RBP2.34□□□□□ -2.03
LINC00643-201ENST00000334389 APOBEC3FQ8IUX4 373 aaKnown RBP2.34□□□□□ -2.03
LINC00643-201ENST00000334389 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 KRTAP9-4Q9BYQ2 154 aa2.34□□□□□ -2.03
LINC00643-201ENST00000334389 MYBBP1AQ9BQG0 1328 aaKnown RBP2.34□□□□□ -2.03
LINC00643-201ENST00000334389 WFS1O76024 890 aa2.34□□□□□ -2.04
LINC00643-201ENST00000334389 PARNO95453 639 aaKnown RBP2.34□□□□□ -2.04
LINC00643-201ENST00000334389 TRIM28Q13263 835 aaKnown RBP2.34□□□□□ -2.04
LINC00643-201ENST00000334389 CST9Q5W186 159 aa2.34□□□□□ -2.04
LINC00643-201ENST00000334389 PDE12Q6L8Q7 609 aaKnown RBP2.34□□□□□ -2.04
LINC00643-201ENST00000334389 PRAM1Q96QH2 718 aa2.34□□□□□ -2.04
LINC00643-201ENST00000334389 CHRDQ9H2X0 955 aa2.34□□□□□ -2.04
LINC00643-201ENST00000334389 ALG13Q9NP73 1137 aaKnown RBP2.34□□□□□ -2.04
LINC00643-201ENST00000334389 KCNH4Q9UQ05 1017 aa2.34□□□□□ -2.04
LINC00643-201ENST00000334389 MLLT6P55198 1093 aaPredicted RBP2.33□□□□□ -2.04
LINC00643-201ENST00000334389 DGKZQ13574 1117 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 TRAPPC3LQ5T215 181 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 NBPF11Q86T75 865 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 C14orf37Q86TY3 774 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.33□□□□□ -2.04
LINC00643-201ENST00000334389 TOX2Q96NM4 488 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 TSEN34Q9BSV6 310 aaKnown RBP2.33□□□□□ -2.04
LINC00643-201ENST00000334389 RRAGCQ9HB90 399 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 ZNF112Q9UJU3 913 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 ZNF521Q96K83 1311 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 LOC102724428A0A0B4J2F2 783 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 IRF6O14896 467 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 MSCO60682 206 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 VIL1P09327 827 aaKnown RBP2.33□□□□□ -2.04
LINC00643-201ENST00000334389 PHKG2P15735 406 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 SCNN1DP51172 638 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 SIK1P57059 783 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 DDR1Q08345 913 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 KIAA2012Q0VF49 1180 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 CCDC184Q52MB2 194 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 CYP26C1Q6V0L0 522 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 TMEFF1Q8IYR6 380 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 TDRD7Q8NHU6 1098 aaKnown RBP2.33□□□□□ -2.04
LINC00643-201ENST00000334389 CDK19Q9BWU1 502 aa2.33□□□□□ -2.04
LINC00643-201ENST00000334389 RTCBQ9Y3I0 505 aaKnown RBP2.33□□□□□ -2.04
LINC00643-201ENST00000334389 FNDC1Q4ZHG4 1894 aaPredicted RBP2.33□□□□□ -2.04
LINC00643-201ENST00000334389 KIAA0355O15063 1070 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 ZBTB7AO95365 584 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 RASGRP2Q7LDG7 609 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 DHX37Q8IY37 1157 aaKnown RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 CNTROBQ8N137 903 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 PHOSPHO2Q8TCD6 241 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 BEGAINQ9BUH8 593 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 GPR25O00155 361 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 LZTS3O60299 673 aaPredicted RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 CST5P28325 142 aaPredicted RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 HOXD10P28358 340 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 EVA1CP58658 441 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 LEXMQ3ZCV2 418 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 PARP10Q53GL7 1025 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 OTUD7BQ6GQQ9 843 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 RSPO2Q6UXX9 243 aaPredicted RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 IFNL2Q8IZJ0 200 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 TDHQ8IZJ6 230 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 HERVK_113Q902F9 699 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 SECISBP2LQ93073 1101 aaKnown RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 CHMP4AQ9BY43 222 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 ARHGAP39Q9C0H5 1083 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 RRP7BPQ9NSQ0 103 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 ROCK2O75116 1388 aaKnown RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 CLEC18AA5D8T8 446 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 U2SURPO15042 1029 aaKnown RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 BBOX1O75936 387 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 PAPSS2O95340 614 aaPredicted RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 PTPN11Q06124 597 aaPredicted RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 HERC4Q5GLZ8 1057 aaPredicted RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 CLEC18BQ6UXF7 455 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 KIAA1958Q8N8K9 716 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 CLEC18CQ8NCF0 446 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 ANKRD24Q8TF21 1146 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 USP6NLQ92738 828 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 GUCD1Q96NT3 240 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 GPR101Q96P66 508 aaPredicted RBP2.32□□□□□ -2.04
LINC00643-201ENST00000334389 ASB2Q96Q27 587 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 ATG3Q9NT62 314 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 RNF181Q9P0P0 153 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 MORF4L1Q9UBU8 362 aa2.32□□□□□ -2.04
LINC00643-201ENST00000334389 H7C1W4 665 aa2.31□□□□□ -2.04
LINC00643-201ENST00000334389 CYP19A1P11511 503 aaPredicted RBP2.31□□□□□ -2.04
LINC00643-201ENST00000334389 TATP17735 454 aaPredicted RBP2.31□□□□□ -2.04
LINC00643-201ENST00000334389 CDCA8Q53HL2 280 aa2.31□□□□□ -2.04
LINC00643-201ENST00000334389 BCL2L12Q9HB09 334 aa2.31□□□□□ -2.04
LINC00643-201ENST00000334389 BOLA1Q9Y3E2 137 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms