RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
LSAMP-201ENST00000333617 PTPN12Q05209 780 aaKnown RBP10.56□□□□□ -0.72
LSAMP-201ENST00000333617 DNAJC10Q8IXB1 793 aa10.56□□□□□ -0.72
LSAMP-201ENST00000333617 KLHDC4Q8TBB5 520 aa10.56□□□□□ -0.72
LSAMP-201ENST00000333617 EAF2Q96CJ1 260 aaPredicted RBP10.56□□□□□ -0.72
LSAMP-201ENST00000333617 THRAP3Q9Y2W1 955 aaKnown RBP10.56□□□□□ -0.72
LSAMP-201ENST00000333617 SPATA31A1Q5TZJ5 1347 aa10.56□□□□□ -0.72
LSAMP-201ENST00000333617 MYH14Q7Z406 1995 aaKnown RBP10.56□□□□□ -0.72
LSAMP-201ENST00000333617 ANAPC15P60006 121 aa10.56□□□□□ -0.72
LSAMP-201ENST00000333617 TJAP1Q5JTD0 557 aa10.56□□□□□ -0.72
LSAMP-201ENST00000333617 KIF6Q6ZMV9 814 aa10.56□□□□□ -0.72
LSAMP-201ENST00000333617 CCDC8Q9H0W5 538 aaPredicted RBP10.56□□□□□ -0.72
LSAMP-201ENST00000333617 DIAPH3Q9NSV4 1193 aa10.56□□□□□ -0.72
LSAMP-201ENST00000333617 SGSM2O43147 1006 aa10.55□□□□□ -0.72
LSAMP-201ENST00000333617 APLP1P51693 650 aa10.55□□□□□ -0.72
LSAMP-201ENST00000333617 FOXO4P98177 505 aa10.55□□□□□ -0.72
LSAMP-201ENST00000333617 RBM26Q5T8P6 1007 aaKnown RBP10.55□□□□□ -0.72
LSAMP-201ENST00000333617 LMBR1LQ6UX01 489 aa10.55□□□□□ -0.72
LSAMP-201ENST00000333617 RUFY2Q8WXA3 655 aa10.55□□□□□ -0.72
LSAMP-201ENST00000333617 SYTL4Q96C24 671 aaPredicted RBP10.55□□□□□ -0.72
LSAMP-201ENST00000333617 EVI5LQ96CN4 794 aa10.55□□□□□ -0.72
LSAMP-201ENST00000333617 MTRQ99707 1265 aa10.55□□□□□ -0.72
LSAMP-201ENST00000333617 IL21Q9HBE4 155 aa10.55□□□□□ -0.72
LSAMP-201ENST00000333617 ZNF330Q9Y3S2 320 aaPredicted RBP10.55□□□□□ -0.72
LSAMP-201ENST00000333617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.55□□□□□ -0.72
LSAMP-201ENST00000333617 TCHHQ07283 1943 aa10.55□□□□□ -0.72
LSAMP-201ENST00000333617 PIP4K2BP78356 416 aa10.54□□□□□ -0.72
LSAMP-201ENST00000333617 TCIRG1Q13488 830 aa10.54□□□□□ -0.72
LSAMP-201ENST00000333617 HIC1Q14526 733 aa10.54□□□□□ -0.72
LSAMP-201ENST00000333617 DDB1Q16531 1140 aa10.54□□□□□ -0.72
LSAMP-201ENST00000333617 ISCA1Q9BUE6 129 aa10.54□□□□□ -0.72
LSAMP-201ENST00000333617 CHMP3Q9Y3E7 222 aa10.54□□□□□ -0.72
LSAMP-201ENST00000333617 CICQ96RK0 1608 aaPredicted RBP10.54□□□□□ -0.72
LSAMP-201ENST00000333617 RREB1Q92766 1687 aa10.54□□□□□ -0.72
LSAMP-201ENST00000333617 NUTM2BA6NNL0 878 aaPredicted RBP10.53□□□□□ -0.72
LSAMP-201ENST00000333617 NUTM2EB1AL46 878 aaPredicted RBP10.53□□□□□ -0.72
LSAMP-201ENST00000333617 HIP1O00291 1037 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 CYP19A1P11511 503 aaPredicted RBP10.53□□□□□ -0.72
LSAMP-201ENST00000333617 HSPA4P34932 840 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 TFCP2Q12800 502 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 TRIM28Q13263 835 aaKnown RBP10.53□□□□□ -0.72
LSAMP-201ENST00000333617 TNNI3KQ59H18 835 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 CWC27Q6UX04 472 aaKnown RBP10.53□□□□□ -0.72
LSAMP-201ENST00000333617 KIAA1211Q6ZU35 1233 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 NUTM2AQ8IVF1 878 aaPredicted RBP10.53□□□□□ -0.72
LSAMP-201ENST00000333617 IL25Q9H293 177 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 TLR7Q9NYK1 1049 aaKnown RBP10.53□□□□□ -0.72
LSAMP-201ENST00000333617 FPGT-TNNI3KV9GXZ4 949 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 RAD50Q92878 1312 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 SPEF2Q9C093 1822 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 CASZ1Q86V15 1759 aa10.53□□□□□ -0.72
LSAMP-201ENST00000333617 COL5A3P25940 1745 aaPredicted RBP10.52□□□□□ -0.72
LSAMP-201ENST00000333617 SLIT2O94813 1529 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 MAP3K15Q6ZN16 1313 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 MCM2P49736 904 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 NEK4P51957 841 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 IL17RAQ96F46 866 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 PRR14Q9BWN1 585 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 TMEM134Q9H6X4 195 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 PALD1Q9ULE6 856 aa10.52□□□□□ -0.72
LSAMP-201ENST00000333617 LAMA4Q16363 1823 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 RCCD1A6NED2 376 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 OATP04181 439 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 MCM4P33991 863 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 RAB3GAP1Q15042 981 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 HSP90AB3PQ58FF7 597 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
LSAMP-201ENST00000333617 IL27Q8NEV9 243 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 SLC4A9Q96Q91 983 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 ARXQ96QS3 562 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 LSG1Q9H089 658 aaKnown RBP10.52□□□□□ -0.73
LSAMP-201ENST00000333617 BOLA2Q9H3K6 86 aa10.52□□□□□ -0.73
LSAMP-201ENST00000333617 ZNF831Q5JPB2 1677 aa10.51□□□□□ -0.73
LSAMP-201ENST00000333617 PCCAP05165 728 aaPredicted RBP10.51□□□□□ -0.73
LSAMP-201ENST00000333617 ATP5JP18859 108 aa10.51□□□□□ -0.73
LSAMP-201ENST00000333617 FBXO41Q8TF61 875 aa10.51□□□□□ -0.73
LSAMP-201ENST00000333617 FSD1Q9BTV5 496 aa10.51□□□□□ -0.73
LSAMP-201ENST00000333617 DBNLQ9UJU6 430 aaKnown RBP10.51□□□□□ -0.73
LSAMP-201ENST00000333617 CCDC9Q9Y3X0 531 aaKnown RBP10.51□□□□□ -0.73
LSAMP-201ENST00000333617 MYO5AQ9Y4I1 1855 aaKnown RBP10.5□□□□□ -0.73
LSAMP-201ENST00000333617 LAMB2P55268 1798 aa10.5□□□□□ -0.73
LSAMP-201ENST00000333617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
LSAMP-201ENST00000333617 CIAO1O76071 339 aa10.5□□□□□ -0.73
LSAMP-201ENST00000333617 IL15P40933 162 aaPredicted RBP10.5□□□□□ -0.73
LSAMP-201ENST00000333617 BARGINQ6ZT62 677 aa10.5□□□□□ -0.73
LSAMP-201ENST00000333617 ATG9AQ7Z3C6 839 aa10.5□□□□□ -0.73
LSAMP-201ENST00000333617 TNPO1Q92973 898 aaKnown RBP10.5□□□□□ -0.73
LSAMP-201ENST00000333617 GPR108Q9NPR9 543 aa10.5□□□□□ -0.73
LSAMP-201ENST00000333617 AKAP11Q9UKA4 1901 aa10.5□□□□□ -0.73
LSAMP-201ENST00000333617 BCORQ6W2J9 1755 aa10.5□□□□□ -0.73
LSAMP-201ENST00000333617 EYA2O00167 538 aa10.49□□□□□ -0.73
LSAMP-201ENST00000333617 IL6STP40189 918 aaPredicted RBP10.49□□□□□ -0.73
LSAMP-201ENST00000333617 HLFQ16534 295 aa10.49□□□□□ -0.73
LSAMP-201ENST00000333617 CCDC57Q2TAC2 916 aa10.49□□□□□ -0.73
LSAMP-201ENST00000333617 MARCH10Q8NA82 808 aaPredicted RBP10.49□□□□□ -0.73
LSAMP-201ENST00000333617 ZBTB38Q8NAP3 1195 aaPredicted RBP10.49□□□□□ -0.73
LSAMP-201ENST00000333617 GBP4Q96PP9 640 aa10.49□□□□□ -0.73
LSAMP-201ENST00000333617 PLA2G12BQ9BX93 195 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms