RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 HCLS1P14317 486 aaPredicted RBP12.68□□□□□ -0.38
CCDC172-201ENST00000333254 LRRC24Q50LG9 513 aa12.68□□□□□ -0.38
CCDC172-201ENST00000333254 CCDC158Q5M9N0 1113 aa12.68□□□□□ -0.38
CCDC172-201ENST00000333254 KIF6Q6ZMV9 814 aa12.68□□□□□ -0.38
CCDC172-201ENST00000333254 ZBTB38Q8NAP3 1195 aaPredicted RBP12.68□□□□□ -0.38
CCDC172-201ENST00000333254 NSUN7Q8NE18 718 aaKnown RBP12.68□□□□□ -0.38
CCDC172-201ENST00000333254 BRF1Q92994 677 aa12.68□□□□□ -0.38
CCDC172-201ENST00000333254 SPATA32Q96LK8 384 aa12.68□□□□□ -0.38
CCDC172-201ENST00000333254 TCEANC2Q96MN5 208 aa12.68□□□□□ -0.38
CCDC172-201ENST00000333254 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
CCDC172-201ENST00000333254 MAP3K15Q6ZN16 1313 aa12.68□□□□□ -0.38
CCDC172-201ENST00000333254 BCL9O00512 1426 aa12.67□□□□□ -0.38
CCDC172-201ENST00000333254 STARD3NLO95772 234 aa12.67□□□□□ -0.38
CCDC172-201ENST00000333254 SCRN1Q12765 414 aa12.67□□□□□ -0.38
CCDC172-201ENST00000333254 GIGYF2Q6Y7W6 1299 aaKnown RBP12.67□□□□□ -0.38
CCDC172-201ENST00000333254 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
CCDC172-201ENST00000333254 E7EWF7 191 aa12.67□□□□□ -0.38
CCDC172-201ENST00000333254 TIMM10P62072 90 aa12.67□□□□□ -0.38
CCDC172-201ENST00000333254 KIAA2012Q0VF49 1180 aa12.67□□□□□ -0.38
CCDC172-201ENST00000333254 CLSTN2Q9H4D0 955 aa12.67□□□□□ -0.38
CCDC172-201ENST00000333254 COL16A1Q07092 1604 aaPredicted RBP12.66□□□□□ -0.38
CCDC172-201ENST00000333254 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
CCDC172-201ENST00000333254 DOT1LQ8TEK3 1739 aa12.66□□□□□ -0.38
CCDC172-201ENST00000333254 ADCY5O95622 1261 aa12.66□□□□□ -0.38
CCDC172-201ENST00000333254 PTMAP06454 111 aaKnown RBP12.66□□□□□ -0.38
CCDC172-201ENST00000333254 HSP90B1P14625 803 aaKnown RBP12.66□□□□□ -0.38
CCDC172-201ENST00000333254 GIMAP6Q6P9H5 292 aa12.66□□□□□ -0.38
CCDC172-201ENST00000333254 APPBP2Q92624 585 aa12.66□□□□□ -0.38
CCDC172-201ENST00000333254 RCOR1Q9UKL0 485 aa12.66□□□□□ -0.38
CCDC172-201ENST00000333254 NDUFB9Q9Y6M9 179 aa12.66□□□□□ -0.38
CCDC172-201ENST00000333254 MYO5AQ9Y4I1 1855 aaKnown RBP12.66□□□□□ -0.38
CCDC172-201ENST00000333254 PHLPP1O60346 1717 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 GOLGA6L4A6NEF3 574 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 H3BQV1 296 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 CTAGE5O15320 804 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 JAK2O60674 1132 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 TTC39AQ5SRH9 613 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 IFFO2Q5TF58 517 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 FERMT3Q86UX7 667 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 AK7Q96M32 723 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 PUS3Q9BZE2 481 aaKnown RBP12.65□□□□□ -0.38
CCDC172-201ENST00000333254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC172-201ENST00000333254 ZNF831Q5JPB2 1677 aa12.65□□□□□ -0.38
CCDC172-201ENST00000333254 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 LIG1P18858 919 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 HSPA2P54652 639 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 EVA1CP58658 441 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 FGD1P98174 961 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 TYRO3Q06418 890 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 STK3Q13188 491 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 IFIT5Q13325 482 aaKnown RBP12.64□□□□□ -0.39
CCDC172-201ENST00000333254 ZSCAN25Q6NSZ9 544 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 PIBF1Q8WXW3 757 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 ZNF594Q96JF6 807 aaPredicted RBP12.64□□□□□ -0.39
CCDC172-201ENST00000333254 ZNF396Q96N95 335 aaPredicted RBP12.64□□□□□ -0.39
CCDC172-201ENST00000333254 TNMDQ9H2S6 317 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 RIPOR2Q9Y4F9 1068 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 TIAM2Q8IVF5 1701 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 ECM29Q5VYK3 1845 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 M0R2C6 588 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 CTDNEP1O95476 244 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 ADD1P35611 737 aaKnown RBP12.64□□□□□ -0.39
CCDC172-201ENST00000333254 IMMTQ16891 758 aaKnown RBP12.64□□□□□ -0.39
CCDC172-201ENST00000333254 DNAJC10Q8IXB1 793 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 PIGBQ92521 554 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 OSBP2Q969R2 916 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 PGBD1Q96JS3 809 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 MRVI1Q9Y6F6 885 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 ZMYM6O95789 1325 aa12.64□□□□□ -0.39
CCDC172-201ENST00000333254 NRAPQ86VF7 1730 aa12.63□□□□□ -0.39
CCDC172-201ENST00000333254 GOLGA6L6A8MZA4 724 aa12.63□□□□□ -0.39
CCDC172-201ENST00000333254 RRP9O43818 475 aaKnown RBP12.63□□□□□ -0.39
CCDC172-201ENST00000333254 DHX16O60231 1041 aaKnown RBP12.63□□□□□ -0.39
CCDC172-201ENST00000333254 CHGBP05060 677 aa12.63□□□□□ -0.39
CCDC172-201ENST00000333254 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
CCDC172-201ENST00000333254 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
CCDC172-201ENST00000333254 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.63□□□□□ -0.39
CCDC172-201ENST00000333254 NLRP10Q86W26 655 aa12.63□□□□□ -0.39
CCDC172-201ENST00000333254 TDRD7Q8NHU6 1098 aaKnown RBP12.63□□□□□ -0.39
CCDC172-201ENST00000333254 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC172-201ENST00000333254 SPTLC3Q9NUV7 552 aa12.63□□□□□ -0.39
CCDC172-201ENST00000333254 DACT1Q9NYF0 836 aa12.63□□□□□ -0.39
CCDC172-201ENST00000333254 FOXP2O15409 715 aa12.62□□□□□ -0.39
CCDC172-201ENST00000333254 ATP2B3Q16720 1220 aa12.62□□□□□ -0.39
CCDC172-201ENST00000333254 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
CCDC172-201ENST00000333254 FAM173BQ6P4H8 233 aa12.62□□□□□ -0.39
CCDC172-201ENST00000333254 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
CCDC172-201ENST00000333254 VGLL2Q8N8G2 317 aa12.62□□□□□ -0.39
CCDC172-201ENST00000333254 CARMIL3Q8ND23 1372 aa12.62□□□□□ -0.39
CCDC172-201ENST00000333254 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 CYP19A1P11511 503 aaPredicted RBP12.61□□□□□ -0.39
CCDC172-201ENST00000333254 IL6STP40189 918 aaPredicted RBP12.61□□□□□ -0.39
CCDC172-201ENST00000333254 CTSWP56202 376 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 APOBRQ0VD83 1088 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 TAF7LQ5H9L4 462 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 SASS6Q6UVJ0 657 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 TTLL11Q8NHH1 800 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 STRN4Q9NRL3 753 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms