RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 ZNF804AQ7Z570 1209 aa25.41■■□□□ 1.66
MRPL40-201ENST00000333130 GPC2Q8N158 579 aa25.41■■□□□ 1.66
MRPL40-201ENST00000333130 COA1Q9GZY4 146 aa25.41■■□□□ 1.66
MRPL40-201ENST00000333130 WDR90Q96KV7 1748 aa25.4■■□□□ 1.66
MRPL40-201ENST00000333130 CIAPIN1Q6FI81 312 aa25.4■■□□□ 1.66
MRPL40-201ENST00000333130 C15orf52Q6ZUT6 534 aaKnown RBP25.4■■□□□ 1.66
MRPL40-201ENST00000333130 PODNQ7Z5L7 613 aa25.4■■□□□ 1.66
MRPL40-201ENST00000333130 IFIT1P09914 478 aaKnown RBP25.39■■□□□ 1.65
MRPL40-201ENST00000333130 ATG9AQ7Z3C6 839 aa25.39■■□□□ 1.65
MRPL40-201ENST00000333130 GJA3Q9Y6H8 435 aa25.39■■□□□ 1.65
MRPL40-201ENST00000333130 SCN4AP35499 1836 aa25.39■■□□□ 1.65
MRPL40-201ENST00000333130 SLC5A1P13866 664 aa25.38■■□□□ 1.65
MRPL40-201ENST00000333130 VGLL2Q8N8G2 317 aa25.38■■□□□ 1.65
MRPL40-201ENST00000333130 PCDHB15Q9Y5E8 787 aa25.38■■□□□ 1.65
MRPL40-201ENST00000333130 DDNO94850 711 aaPredicted RBP25.37■■□□□ 1.65
MRPL40-201ENST00000333130 CAVIN4Q5BKX8 364 aa25.37■■□□□ 1.65
MRPL40-201ENST00000333130 VPS37DQ86XT2 251 aa25.37■■□□□ 1.65
MRPL40-201ENST00000333130 SCN9AQ15858 1988 aa25.37■■□□□ 1.65
MRPL40-201ENST00000333130 IQCA1LA6NCM1 817 aa25.36■■□□□ 1.65
MRPL40-201ENST00000333130 WTIPA6NIX2 430 aaPredicted RBP25.36■■□□□ 1.65
MRPL40-201ENST00000333130 SURF6O75683 361 aaKnown RBP25.36■■□□□ 1.65
MRPL40-201ENST00000333130 RAD17O75943 681 aa25.36■■□□□ 1.65
MRPL40-201ENST00000333130 CXCL9Q07325 125 aa25.36■■□□□ 1.65
MRPL40-201ENST00000333130 LPIN2Q92539 896 aa25.36■■□□□ 1.65
MRPL40-201ENST00000333130 AKAP2Q9Y2D5 859 aa25.36■■□□□ 1.65
MRPL40-201ENST00000333130 MYH13Q9UKX3 1938 aa25.35■■□□□ 1.65
MRPL40-201ENST00000333130 YDJCA8MPS7 323 aa25.35■■□□□ 1.65
MRPL40-201ENST00000333130 SNAP23O00161 211 aa25.35■■□□□ 1.65
MRPL40-201ENST00000333130 LMOD1P29536 600 aaPredicted RBP25.35■■□□□ 1.65
MRPL40-201ENST00000333130 ATP2B3Q16720 1220 aa25.35■■□□□ 1.65
MRPL40-201ENST00000333130 HSP90AB4PQ58FF6 505 aa25.35■■□□□ 1.65
MRPL40-201ENST00000333130 NOP58Q9Y2X3 529 aaKnown RBP25.35■■□□□ 1.65
MRPL40-201ENST00000333130 ARAP2Q8WZ64 1704 aa25.35■■□□□ 1.65
MRPL40-201ENST00000333130 KLRK1P26718 216 aa25.34■■□□□ 1.65
MRPL40-201ENST00000333130 TXNRD3Q86VQ6 643 aa25.34■■□□□ 1.65
MRPL40-201ENST00000333130 L3MBTL3Q96JM7 780 aaPredicted RBP25.34■■□□□ 1.65
MRPL40-201ENST00000333130 VEGFAP15692 232 aaPredicted RBP25.33■■□□□ 1.65
MRPL40-201ENST00000333130 ERC1Q8IUD2 1116 aa25.33■■□□□ 1.65
MRPL40-201ENST00000333130 C16orf71Q8IYS4 520 aaPredicted RBP25.33■■□□□ 1.65
MRPL40-201ENST00000333130 USP17L3A6NCW0 530 aa25.32■■□□□ 1.64
MRPL40-201ENST00000333130 USP17L4A6NCW7 530 aa25.32■■□□□ 1.64
MRPL40-201ENST00000333130 HIBADHP31937 336 aaKnown RBP25.32■■□□□ 1.64
MRPL40-201ENST00000333130 USP17L1Q7RTZ2 530 aa25.32■■□□□ 1.64
MRPL40-201ENST00000333130 FBXW7Q969H0 707 aa25.32■■□□□ 1.64
MRPL40-201ENST00000333130 RRAGCQ9HB90 399 aa25.32■■□□□ 1.64
MRPL40-201ENST00000333130 CD209Q9NNX6 404 aa25.32■■□□□ 1.64
MRPL40-201ENST00000333130 NMRK2Q9NPI5 230 aa25.32■■□□□ 1.64
MRPL40-201ENST00000333130 PSMD14O00487 310 aa25.31■■□□□ 1.64
MRPL40-201ENST00000333130 FGFR2P21802 821 aa25.31■■□□□ 1.64
MRPL40-201ENST00000333130 IRS2Q9Y4H2 1338 aa25.31■■□□□ 1.64
MRPL40-201ENST00000333130 RPS12P25398 132 aaKnown RBP25.31■■□□□ 1.64
MRPL40-201ENST00000333130 TFCP2Q12800 502 aa25.31■■□□□ 1.64
MRPL40-201ENST00000333130 HACL1Q9UJ83 578 aa25.31■■□□□ 1.64
MRPL40-201ENST00000333130 FRAT2O75474 233 aaPredicted RBP25.3■■□□□ 1.64
MRPL40-201ENST00000333130 GYG1P46976 350 aa25.3■■□□□ 1.64
MRPL40-201ENST00000333130 MYO3BQ8WXR4 1341 aa25.29■■□□□ 1.64
MRPL40-201ENST00000333130 IL1R1P14778 569 aa25.29■■□□□ 1.64
MRPL40-201ENST00000333130 HDAC1Q13547 482 aaPredicted RBP25.29■■□□□ 1.64
MRPL40-201ENST00000333130 STRIP1Q5VSL9 837 aa25.29■■□□□ 1.64
MRPL40-201ENST00000333130 FAM84BQ96KN1 310 aaPredicted RBP25.29■■□□□ 1.64
MRPL40-201ENST00000333130 VIL1P09327 827 aaKnown RBP25.28■■□□□ 1.64
MRPL40-201ENST00000333130 GMPSP49915 693 aaPredicted RBP25.28■■□□□ 1.64
MRPL40-201ENST00000333130 GNL3LQ9NVN8 582 aaKnown RBP25.28■■□□□ 1.64
MRPL40-201ENST00000333130 EXOC6BQ9Y2D4 811 aa25.28■■□□□ 1.64
MRPL40-201ENST00000333130 ZNF609O15014 1411 aa25.27■■□□□ 1.64
MRPL40-201ENST00000333130 NEFLP07196 543 aa25.27■■□□□ 1.64
MRPL40-201ENST00000333130 TTLL5Q6EMB2 1281 aa25.27■■□□□ 1.64
MRPL40-201ENST00000333130 RSBN1LQ6PCB5 846 aaPredicted RBP25.27■■□□□ 1.64
MRPL40-201ENST00000333130 DPF2Q92785 391 aa25.27■■□□□ 1.64
MRPL40-201ENST00000333130 KCNQ5Q9NR82 932 aa25.27■■□□□ 1.64
MRPL40-201ENST00000333130 A0A1B0GUL7 405 aa25.26■■□□□ 1.63
MRPL40-201ENST00000333130 SASH1O94885 1247 aa25.26■■□□□ 1.63
MRPL40-201ENST00000333130 GTF2IP78347 998 aa25.26■■□□□ 1.63
MRPL40-201ENST00000333130 GORABQ5T7V8 394 aa25.26■■□□□ 1.63
MRPL40-201ENST00000333130 FBXO33Q7Z6M2 555 aa25.26■■□□□ 1.63
MRPL40-201ENST00000333130 AGBL3Q8NEM8 1001 aa25.26■■□□□ 1.63
MRPL40-201ENST00000333130 NEUROD6Q96NK8 337 aa25.26■■□□□ 1.63
MRPL40-201ENST00000333130 GPR108Q9NPR9 543 aa25.26■■□□□ 1.63
MRPL40-201ENST00000333130 GPRC5DQ9NZD1 345 aa25.26■■□□□ 1.63
MRPL40-201ENST00000333130 ZNF646O15015 1829 aaPredicted RBP25.25■■□□□ 1.63
MRPL40-201ENST00000333130 RAB11FIP3O75154 756 aa25.25■■□□□ 1.63
MRPL40-201ENST00000333130 SCNN1DP51172 638 aa25.25■■□□□ 1.63
MRPL40-201ENST00000333130 DCTPP1Q9H773 170 aa25.25■■□□□ 1.63
MRPL40-201ENST00000333130 H7C1D1 291 aa25.24■■□□□ 1.63
MRPL40-201ENST00000333130 EPHX2P34913 555 aa25.24■■□□□ 1.63
MRPL40-201ENST00000333130 BCAMP50895 628 aa25.24■■□□□ 1.63
MRPL40-201ENST00000333130 PNMA8AQ86V59 439 aaPredicted RBP25.24■■□□□ 1.63
MRPL40-201ENST00000333130 TDRD7Q8NHU6 1098 aaKnown RBP25.24■■□□□ 1.63
MRPL40-201ENST00000333130 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.24■■□□□ 1.63
MRPL40-201ENST00000333130 KIF3CO14782 793 aa25.23■■□□□ 1.63
MRPL40-201ENST00000333130 KIF1BPQ96EK5 621 aa25.23■■□□□ 1.63
MRPL40-201ENST00000333130 TAF1DQ9H5J8 278 aaPredicted RBP25.23■■□□□ 1.63
MRPL40-201ENST00000333130 ZBTB12Q9Y330 459 aaPredicted RBP25.23■■□□□ 1.63
MRPL40-201ENST00000333130 TIMM10P62072 90 aa25.22■■□□□ 1.63
MRPL40-201ENST00000333130 TNNI3KQ59H18 835 aa25.22■■□□□ 1.63
MRPL40-201ENST00000333130 DACT2Q5SW24 774 aa25.22■■□□□ 1.63
MRPL40-201ENST00000333130 ADARB2Q9NS39 739 aaKnown RBP25.22■■□□□ 1.63
MRPL40-201ENST00000333130 CNOT7Q9UIV1 285 aaKnown RBP25.22■■□□□ 1.63
MRPL40-201ENST00000333130 FPGT-TNNI3KV9GXZ4 949 aa25.22■■□□□ 1.63
MRPL40-201ENST00000333130 POTECB2RU33 542 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms