RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 CCT4P50991 539 aaKnown RBP12.15□□□□□ -0.46
SYN3-201ENST00000332840 CCDC57Q2TAC2 916 aa12.15□□□□□ -0.46
SYN3-201ENST00000332840 CENPQQ7L2Z9 268 aaPredicted RBP12.15□□□□□ -0.46
SYN3-201ENST00000332840 SLC51AQ86UW1 340 aa12.15□□□□□ -0.46
SYN3-201ENST00000332840 ITPRIPQ8IWB1 547 aa12.15□□□□□ -0.46
SYN3-201ENST00000332840 AIDAQ96BJ3 306 aa12.15□□□□□ -0.46
SYN3-201ENST00000332840 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
SYN3-201ENST00000332840 POLR2AP24928 1970 aaKnown RBP12.15□□□□□ -0.46
SYN3-201ENST00000332840 UTYO14607 1347 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 DUOX1Q9NRD9 1551 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 TNRC18O15417 2968 aaPredicted RBP12.14□□□□□ -0.47
SYN3-201ENST00000332840 COL4A5P29400 1685 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 ECE2O60344 883 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 RPS12P25398 132 aaKnown RBP12.14□□□□□ -0.47
SYN3-201ENST00000332840 SCNN1DP51172 638 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 TAF7LQ5H9L4 462 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
SYN3-201ENST00000332840 MINPP1Q9UNW1 487 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 LEMD3Q9Y2U8 911 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 MED23Q9ULK4 1368 aa12.14□□□□□ -0.47
SYN3-201ENST00000332840 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
SYN3-201ENST00000332840 FOXO4P98177 505 aa12.13□□□□□ -0.47
SYN3-201ENST00000332840 LMBR1LQ6UX01 489 aa12.13□□□□□ -0.47
SYN3-201ENST00000332840 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
SYN3-201ENST00000332840 PODNQ7Z5L7 613 aa12.13□□□□□ -0.47
SYN3-201ENST00000332840 DPF2Q92785 391 aa12.13□□□□□ -0.47
SYN3-201ENST00000332840 ADARB2Q9NS39 739 aaKnown RBP12.13□□□□□ -0.47
SYN3-201ENST00000332840 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
SYN3-201ENST00000332840 LTBP1Q14766 1721 aa12.12□□□□□ -0.47
SYN3-201ENST00000332840 RAD17O75943 681 aa12.12□□□□□ -0.47
SYN3-201ENST00000332840 KCNJ4P48050 445 aa12.12□□□□□ -0.47
SYN3-201ENST00000332840 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
SYN3-201ENST00000332840 GMPSP49915 693 aaPredicted RBP12.12□□□□□ -0.47
SYN3-201ENST00000332840 GRM1Q13255 1194 aa12.12□□□□□ -0.47
SYN3-201ENST00000332840 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
SYN3-201ENST00000332840 PASKQ96RG2 1323 aa12.11□□□□□ -0.47
SYN3-201ENST00000332840 TAF1P21675 1872 aa12.11□□□□□ -0.47
SYN3-201ENST00000332840 TMEM88BA6NKF7 163 aa12.11□□□□□ -0.47
SYN3-201ENST00000332840 YDJCA8MPS7 323 aa12.11□□□□□ -0.47
SYN3-201ENST00000332840 H7C1D1 291 aa12.11□□□□□ -0.47
SYN3-201ENST00000332840 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
SYN3-201ENST00000332840 MAP1SQ66K74 1059 aaPredicted RBP12.11□□□□□ -0.47
SYN3-201ENST00000332840 INTS3Q68E01 1043 aaKnown RBP12.11□□□□□ -0.47
SYN3-201ENST00000332840 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
SYN3-201ENST00000332840 ZC3H15Q8WU90 426 aaKnown RBP12.11□□□□□ -0.47
SYN3-201ENST00000332840 ZNF804BA4D1E1 1349 aa12.11□□□□□ -0.47
SYN3-201ENST00000332840 PDE4DIPQ5VU43 2346 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 PSMD14O00487 310 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
SYN3-201ENST00000332840 EPS15P42566 896 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 MMP14P50281 582 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 FMR1Q06787 632 aaKnown RBP eCLIP12.1□□□□□ -0.47
SYN3-201ENST00000332840 CHRNDQ07001 517 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
SYN3-201ENST00000332840 SUCLG2Q96I99 432 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 COA1Q9GZY4 146 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 RWDD1Q9H446 243 aaPredicted RBP12.1□□□□□ -0.47
SYN3-201ENST00000332840 PRDM10Q9NQV6 1147 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 CNNM1Q9NRU3 951 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 ZBTB40Q9NUA8 1239 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 ZNF609O15014 1411 aa12.1□□□□□ -0.47
SYN3-201ENST00000332840 ITGBL1O95965 494 aaPredicted RBP12.09□□□□□ -0.47
SYN3-201ENST00000332840 UBTFL1P0CB47 393 aaPredicted RBP12.09□□□□□ -0.47
SYN3-201ENST00000332840 HSPA8P11142 646 aaKnown RBP12.09□□□□□ -0.47
SYN3-201ENST00000332840 EPHA10Q5JZY3 1008 aa12.09□□□□□ -0.47
SYN3-201ENST00000332840 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
SYN3-201ENST00000332840 AGBL3Q8NEM8 1001 aa12.09□□□□□ -0.47
SYN3-201ENST00000332840 USP44Q9H0E7 712 aa12.09□□□□□ -0.47
SYN3-201ENST00000332840 CNOT7Q9UIV1 285 aaKnown RBP12.09□□□□□ -0.47
SYN3-201ENST00000332840 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
SYN3-201ENST00000332840 PCDHB15Q9Y5E8 787 aa12.09□□□□□ -0.47
SYN3-201ENST00000332840 COL4A1P02462 1669 aa12.09□□□□□ -0.47
SYN3-201ENST00000332840 MROH5Q6ZUA9 1318 aa12.09□□□□□ -0.47
SYN3-201ENST00000332840 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
SYN3-201ENST00000332840 USP17L3A6NCW0 530 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 USP17L4A6NCW7 530 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 VIL1P09327 827 aaKnown RBP12.08□□□□□ -0.48
SYN3-201ENST00000332840 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 SPDYE2Q495Y8 402 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
SYN3-201ENST00000332840 USP17L1Q7RTZ2 530 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 CNTROBQ8N137 903 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 ABHD8Q96I13 439 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
SYN3-201ENST00000332840 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
SYN3-201ENST00000332840 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
SYN3-201ENST00000332840 ABT1Q9ULW3 272 aaKnown RBP12.08□□□□□ -0.48
SYN3-201ENST00000332840 CCDC85CA6NKD9 419 aa12.07□□□□□ -0.48
SYN3-201ENST00000332840 IGHDP01880 384 aa12.07□□□□□ -0.48
SYN3-201ENST00000332840 GNAI3P08754 354 aa12.07□□□□□ -0.48
SYN3-201ENST00000332840 DEFB115Q30KQ5 88 aa12.07□□□□□ -0.48
SYN3-201ENST00000332840 STRIP1Q5VSL9 837 aa12.07□□□□□ -0.48
SYN3-201ENST00000332840 RSBN1LQ6PCB5 846 aaPredicted RBP12.07□□□□□ -0.48
SYN3-201ENST00000332840 ZNF804AQ7Z570 1209 aa12.07□□□□□ -0.48
SYN3-201ENST00000332840 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
SYN3-201ENST00000332840 KAZALD1Q96I82 304 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms