RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 PHRF1Q9P1Y6 1649 aaKnown RBP21.12■□□□□ 0.97
PKP3-201ENST00000331563 SRGAP3O43295 1099 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 PHKG2P15735 406 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 ST5P78524 1137 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 PPP1R13BQ96KQ4 1090 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 L2HGDHQ9H9P8 463 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 H3BQV1 296 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 NRDCO43847 1150 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 MYL6BP14649 208 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 GUCY2CP25092 1073 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 IFFO2Q5TF58 517 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 DDX11Q96FC9 970 aa21.12■□□□□ 0.97
PKP3-201ENST00000331563 ZCCHC17Q9NP64 241 aaKnown RBP21.12■□□□□ 0.97
PKP3-201ENST00000331563 SEC31AO94979 1220 aaKnown RBP21.11■□□□□ 0.97
PKP3-201ENST00000331563 TOM1L2Q6ZVM7 507 aa21.11■□□□□ 0.97
PKP3-201ENST00000331563 AOPEPQ8N6M6 819 aa21.11■□□□□ 0.97
PKP3-201ENST00000331563 CCDC191Q8NCU4 936 aa21.11■□□□□ 0.97
PKP3-201ENST00000331563 FAM208AQ9UK61 1670 aaKnown RBP21.11■□□□□ 0.97
PKP3-201ENST00000331563 TUBGCP6Q96RT7 1819 aa21.11■□□□□ 0.97
PKP3-201ENST00000331563 SMC2O95347 1197 aa21.1■□□□□ 0.97
PKP3-201ENST00000331563 E4F1Q66K89 784 aaPredicted RBP21.1■□□□□ 0.97
PKP3-201ENST00000331563 SMARCE1Q969G3 411 aa21.1■□□□□ 0.97
PKP3-201ENST00000331563 DNAI1Q9UI46 699 aa21.1■□□□□ 0.97
PKP3-201ENST00000331563 RBM8AQ9Y5S9 174 aaKnown RBP21.1■□□□□ 0.97
PKP3-201ENST00000331563 LCMT1Q9UIC8 334 aa21.1■□□□□ 0.97
PKP3-201ENST00000331563 PSMA5P28066 241 aa21.1■□□□□ 0.97
PKP3-201ENST00000331563 ZSCAN26Q16670 478 aa21.1■□□□□ 0.97
PKP3-201ENST00000331563 CWF19L2Q2TBE0 894 aaKnown RBP21.1■□□□□ 0.97
PKP3-201ENST00000331563 CREB3L3Q68CJ9 461 aa21.1■□□□□ 0.97
PKP3-201ENST00000331563 BLOC1S2Q6QNY1 142 aa21.1■□□□□ 0.97
PKP3-201ENST00000331563 SSH3Q8TE77 659 aa21.1■□□□□ 0.97
PKP3-201ENST00000331563 GLRX3O76003 335 aaKnown RBP21.09■□□□□ 0.97
PKP3-201ENST00000331563 ZNF790Q6PG37 636 aa21.09■□□□□ 0.97
PKP3-201ENST00000331563 CEP57L1Q8IYX8 460 aa21.09■□□□□ 0.97
PKP3-201ENST00000331563 DNAAF4Q8WXU2 420 aa21.09■□□□□ 0.97
PKP3-201ENST00000331563 ANO10Q9NW15 660 aa21.09■□□□□ 0.97
PKP3-201ENST00000331563 NCAPD2Q15021 1401 aa21.09■□□□□ 0.97
PKP3-201ENST00000331563 SFPQP23246 707 aaKnown RBP eCLIP21.09■□□□□ 0.97
PKP3-201ENST00000331563 ERCC4Q92889 916 aaPredicted RBP21.09■□□□□ 0.97
PKP3-201ENST00000331563 SLC52A2Q9HAB3 445 aa21.09■□□□□ 0.97
PKP3-201ENST00000331563 MAP3K2Q9Y2U5 619 aa21.09■□□□□ 0.97
PKP3-201ENST00000331563 KDM6AO15550 1401 aaPredicted RBP21.08■□□□□ 0.97
PKP3-201ENST00000331563 KINO60870 393 aaKnown RBP21.08■□□□□ 0.97
PKP3-201ENST00000331563 URI1O94763 535 aaPredicted RBP21.08■□□□□ 0.97
PKP3-201ENST00000331563 OAS2P29728 719 aaKnown RBP21.08■□□□□ 0.97
PKP3-201ENST00000331563 CCDC73Q6ZRK6 1079 aa21.08■□□□□ 0.97
PKP3-201ENST00000331563 TMC6Q7Z403 805 aa21.08■□□□□ 0.97
PKP3-201ENST00000331563 CCAR1Q8IX12 1150 aaKnown RBP21.08■□□□□ 0.97
PKP3-201ENST00000331563 CCDC34Q96HJ3 373 aa21.08■□□□□ 0.97
PKP3-201ENST00000331563 ZNF496Q96IT1 587 aaPredicted RBP21.08■□□□□ 0.97
PKP3-201ENST00000331563 ZRSR1Q15695 479 aaKnown RBP21.08■□□□□ 0.96
PKP3-201ENST00000331563 DHX40Q8IX18 779 aaKnown RBP21.08■□□□□ 0.96
PKP3-201ENST00000331563 ATG3Q9NT62 314 aa21.08■□□□□ 0.96
PKP3-201ENST00000331563 CWC15Q9P013 229 aaKnown RBP21.08■□□□□ 0.96
PKP3-201ENST00000331563 ORC3Q9UBD5 711 aaPredicted RBP21.08■□□□□ 0.96
PKP3-201ENST00000331563 DBF4Q9UBU7 674 aaPredicted RBP21.08■□□□□ 0.96
PKP3-201ENST00000331563 CFAP45Q9UL16 551 aa21.08■□□□□ 0.96
PKP3-201ENST00000331563 CTAGE5O15320 804 aa21.07■□□□□ 0.96
PKP3-201ENST00000331563 FOSBP53539 338 aa21.07■□□□□ 0.96
PKP3-201ENST00000331563 ANKRD1Q15327 319 aa21.07■□□□□ 0.96
PKP3-201ENST00000331563 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
PKP3-201ENST00000331563 GOLGA6L1Q8N7Z2 621 aa21.07■□□□□ 0.96
PKP3-201ENST00000331563 LMO7Q8WWI1 1683 aa21.07■□□□□ 0.96
PKP3-201ENST00000331563 ZRANB2O95218 330 aaKnown RBP eCLIP21.07■□□□□ 0.963e-6■■■■■ 27.8
PKP3-201ENST00000331563 COL9A3Q14050 684 aaPredicted RBP21.07■□□□□ 0.96
PKP3-201ENST00000331563 NECTIN1Q15223 517 aa21.07■□□□□ 0.96
PKP3-201ENST00000331563 NAT10Q9H0A0 1025 aaKnown RBP21.07■□□□□ 0.96
PKP3-201ENST00000331563 GNL2Q13823 731 aaKnown RBP21.06■□□□□ 0.96
PKP3-201ENST00000331563 CCDC93Q567U6 631 aa21.06■□□□□ 0.96
PKP3-201ENST00000331563 BEND3Q5T5X7 828 aa21.06■□□□□ 0.96
PKP3-201ENST00000331563 ADCY9O60503 1353 aa21.06■□□□□ 0.96
PKP3-201ENST00000331563 CNPY4Q8N129 248 aa21.06■□□□□ 0.96
PKP3-201ENST00000331563 TOMM22Q9NS69 142 aa21.06■□□□□ 0.96
PKP3-201ENST00000331563 JRKLQ9Y4A0 524 aa21.06■□□□□ 0.96
PKP3-201ENST00000331563 JAK2O60674 1132 aa21.05■□□□□ 0.96
PKP3-201ENST00000331563 FMNL2Q96PY5 1086 aa21.05■□□□□ 0.96
PKP3-201ENST00000331563 BANK1Q8NDB2 785 aa21.05■□□□□ 0.96
PKP3-201ENST00000331563 BRF1Q92994 677 aa21.05■□□□□ 0.96
PKP3-201ENST00000331563 SMC1AQ14683 1233 aaKnown RBP21.05■□□□□ 0.96
PKP3-201ENST00000331563 CT47A1Q5JQC4 288 aaPredicted RBP21.05■□□□□ 0.96
PKP3-201ENST00000331563 CCDC150Q8NCX0 1101 aa21.05■□□□□ 0.96
PKP3-201ENST00000331563 AK7Q96M32 723 aa21.05■□□□□ 0.96
PKP3-201ENST00000331563 SRLQ86TD4 932 aa21.04■□□□□ 0.96
PKP3-201ENST00000331563 CARD6Q9BX69 1037 aa21.04■□□□□ 0.96
PKP3-201ENST00000331563 KCND1Q9NSA2 647 aa21.04■□□□□ 0.96
PKP3-201ENST00000331563 SOS2Q07890 1332 aaPredicted RBP21.04■□□□□ 0.96
PKP3-201ENST00000331563 COL18A1P39060 1754 aa21.04■□□□□ 0.96
PKP3-201ENST00000331563 KDM3BQ7LBC6 1761 aa21.04■□□□□ 0.96
PKP3-201ENST00000331563 PSDA5PKW4 1024 aaPredicted RBP21.04■□□□□ 0.96
PKP3-201ENST00000331563 LMAN1P49257 510 aa21.04■□□□□ 0.96
PKP3-201ENST00000331563 EPC1Q9H2F5 836 aa21.04■□□□□ 0.96
PKP3-201ENST00000331563 IFNKQ9P0W0 207 aa21.04■□□□□ 0.96
PKP3-201ENST00000331563 SLC27A2O14975 620 aa21.03■□□□□ 0.96
PKP3-201ENST00000331563 ETF1P62495 437 aaKnown RBP21.03■□□□□ 0.96
PKP3-201ENST00000331563 CLASRPQ8N2M8 674 aaKnown RBP21.03■□□□□ 0.96
PKP3-201ENST00000331563 GPATCH11Q8N954 259 aa21.03■□□□□ 0.96
PKP3-201ENST00000331563 IMPACTQ9P2X3 320 aa21.03■□□□□ 0.96
PKP3-201ENST00000331563 HSP90B1P14625 803 aaKnown RBP21.03■□□□□ 0.96
PKP3-201ENST00000331563 EP400NLQ6ZTU2 488 aa21.03■□□□□ 0.96
PKP3-201ENST00000331563 FAM177A1Q8N128 213 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms