RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 PLCH1Q4KWH8 1693 aa17.59■□□□□ 0.41
CLCNKA-201ENST00000331433 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
CLCNKA-201ENST00000331433 FOXP2O15409 715 aa17.59■□□□□ 0.41
CLCNKA-201ENST00000331433 PDIA4P13667 645 aaKnown RBP17.59■□□□□ 0.41
CLCNKA-201ENST00000331433 ANKRD36CQ5JPF3 1778 aa17.58■□□□□ 0.41
CLCNKA-201ENST00000331433 MYH3P11055 1940 aa17.58■□□□□ 0.41
CLCNKA-201ENST00000331433 EXOSC10Q01780 885 aaKnown RBP17.58■□□□□ 0.41
CLCNKA-201ENST00000331433 MCAMP43121 646 aa17.58■□□□□ 0.4
CLCNKA-201ENST00000331433 HAND2P61296 217 aa17.58■□□□□ 0.4
CLCNKA-201ENST00000331433 PUS7LQ9H0K6 701 aaKnown RBP17.58■□□□□ 0.4
CLCNKA-201ENST00000331433 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.4
CLCNKA-201ENST00000331433 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.4
CLCNKA-201ENST00000331433 PFKFB2O60825 505 aa17.57■□□□□ 0.4
CLCNKA-201ENST00000331433 IL6STP40189 918 aaPredicted RBP17.57■□□□□ 0.4
CLCNKA-201ENST00000331433 GIMAP6Q6P9H5 292 aa17.57■□□□□ 0.4
CLCNKA-201ENST00000331433 ACSBG1Q96GR2 724 aa17.57■□□□□ 0.4
CLCNKA-201ENST00000331433 PPFIA3O75145 1194 aa17.57■□□□□ 0.4
CLCNKA-201ENST00000331433 LRRFIP1Q32MZ4 808 aaKnown RBP17.57■□□□□ 0.4
CLCNKA-201ENST00000331433 ZSCAN30Q86W11 494 aa17.57■□□□□ 0.4
CLCNKA-201ENST00000331433 NAP1L2Q9ULW6 460 aaPredicted RBP17.57■□□□□ 0.4
CLCNKA-201ENST00000331433 CCT2P78371 535 aaKnown RBP17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 NCOA5Q9HCD5 579 aaKnown RBP17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 COL22A1Q8NFW1 1626 aaPredicted RBP17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 FAM177BA6PVY3 158 aa17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 PDE8AO60658 829 aa17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 ZFYP08048 801 aaPredicted RBP17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 HCLS1P14317 486 aaPredicted RBP17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 FOSBP53539 338 aa17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 NSUN7Q8NE18 718 aaKnown RBP17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 AGXT2Q9BYV1 514 aa17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 WNK3Q9BYP7 1800 aa17.56■□□□□ 0.4
CLCNKA-201ENST00000331433 AHDC1Q5TGY3 1603 aaPredicted RBP17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 LETM1O95202 739 aaPredicted RBP17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 CTDNEP1O95476 244 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 ZNF34Q8IZ26 560 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 FAM184AQ8NB25 1140 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 SMARCC2Q8TAQ2 1214 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 APPBP2Q92624 585 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 AKAP11Q9UKA4 1901 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 SLIT2O94813 1529 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 H3BQV1 296 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 FGAP02671 866 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 DDB1Q16531 1140 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 IFFO2Q5TF58 517 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 SPATA32Q96LK8 384 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 NWD2Q9ULI1 1742 aa17.55■□□□□ 0.4
CLCNKA-201ENST00000331433 ELP1O95163 1332 aa17.54■□□□□ 0.4
CLCNKA-201ENST00000331433 HELBQ8NG08 1087 aaPredicted RBP17.54■□□□□ 0.4
CLCNKA-201ENST00000331433 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
CLCNKA-201ENST00000331433 PDE8BO95263 885 aa17.54■□□□□ 0.4
CLCNKA-201ENST00000331433 LIG1P18858 919 aa17.54■□□□□ 0.4
CLCNKA-201ENST00000331433 RESTQ13127 1097 aa17.54■□□□□ 0.4
CLCNKA-201ENST00000331433 SCAND2PQ9GZW5 306 aaPredicted RBP17.54■□□□□ 0.4
CLCNKA-201ENST00000331433 ANO8Q9HCE9 1232 aaPredicted RBP17.54■□□□□ 0.4
CLCNKA-201ENST00000331433 MYH7P12883 1935 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 SPATA31A1Q5TZJ5 1347 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 GPAA1O43292 621 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 INTS5Q6P9B9 1019 aaKnown RBP17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 LEO1Q8WVC0 666 aaPredicted RBP17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 LTBP4Q8N2S1 1624 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 ATP6V1AP38606 617 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 PHKA1P46020 1223 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 IMMTQ16891 758 aaKnown RBP17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 HS1BP3Q53T59 392 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 FUCA2Q9BTY2 467 aa17.53■□□□□ 0.4
CLCNKA-201ENST00000331433 MSNP26038 577 aaKnown RBP17.52■□□□□ 0.4
CLCNKA-201ENST00000331433 CRKLP46109 303 aaKnown RBP17.52■□□□□ 0.4
CLCNKA-201ENST00000331433 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
CLCNKA-201ENST00000331433 SLC9C2Q5TAH2 1124 aa17.52■□□□□ 0.39
CLCNKA-201ENST00000331433 CCDC102BQ68D86 513 aa17.52■□□□□ 0.39
CLCNKA-201ENST00000331433 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.39
CLCNKA-201ENST00000331433 MARCH10Q8NA82 808 aaPredicted RBP17.52■□□□□ 0.39
CLCNKA-201ENST00000331433 CCDC87Q9NVE4 849 aa17.52■□□□□ 0.39
CLCNKA-201ENST00000331433 MYO5AQ9Y4I1 1855 aaKnown RBP17.52■□□□□ 0.39
CLCNKA-201ENST00000331433 SNAP23O00161 211 aa17.51■□□□□ 0.39
CLCNKA-201ENST00000331433 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
CLCNKA-201ENST00000331433 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLCNKA-201ENST00000331433 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.51■□□□□ 0.39
CLCNKA-201ENST00000331433 GOLGA6L4A6NEF3 574 aa17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 ADD2P35612 726 aa17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 CAMK4Q16566 473 aa17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 USP25Q9UHP3 1055 aa17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 NOL7Q9UMY1 257 aaKnown RBP17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 LOC102724428A0A0B4J2F2 783 aa17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 NUTM2BA6NNL0 878 aaPredicted RBP17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 NUTM2EB1AL46 878 aaPredicted RBP17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 SIK1P57059 783 aa17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 ITPK1Q13572 414 aa17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 NUTM2AQ8IVF1 878 aaPredicted RBP17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 ZNF274Q96GC6 653 aaPredicted RBP17.5■□□□□ 0.39
CLCNKA-201ENST00000331433 CDCA7Q9BWT1 371 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms