RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 HDAC5Q9UQL6 1122 aa23.78■■□□□ 1.4
CMTM4-201ENST00000330687 INO80Q9ULG1 1556 aaPredicted RBP23.78■■□□□ 1.4
CMTM4-201ENST00000330687 RAPGEF3O95398 923 aa23.77■■□□□ 1.4
CMTM4-201ENST00000330687 TEX2Q8IWB9 1127 aa23.77■■□□□ 1.4
CMTM4-201ENST00000330687 BICC1Q9H694 974 aaKnown RBP23.77■■□□□ 1.4
CMTM4-201ENST00000330687 PHLPP2Q6ZVD8 1323 aa23.77■■□□□ 1.4
CMTM4-201ENST00000330687 ADGRB3O60242 1522 aa23.77■■□□□ 1.4
CMTM4-201ENST00000330687 EFCAB6Q5THR3 1501 aa23.77■■□□□ 1.4
CMTM4-201ENST00000330687 CHPF2Q9P2E5 772 aa23.77■■□□□ 1.39
CMTM4-201ENST00000330687 ZCCHC11Q5TAX3 1644 aaKnown RBP23.76■■□□□ 1.39
CMTM4-201ENST00000330687 WDHD1O75717 1129 aaPredicted RBP23.76■■□□□ 1.39
CMTM4-201ENST00000330687 CTR9Q6PD62 1173 aa23.76■■□□□ 1.39
CMTM4-201ENST00000330687 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
CMTM4-201ENST00000330687 MYCBPQ99417 103 aaPredicted RBP23.76■■□□□ 1.39
CMTM4-201ENST00000330687 DEPDC5O75140 1603 aa23.76■■□□□ 1.39
CMTM4-201ENST00000330687 IVLP07476 585 aa23.75■■□□□ 1.39
CMTM4-201ENST00000330687 CWF19L2Q2TBE0 894 aaKnown RBP23.75■■□□□ 1.39
CMTM4-201ENST00000330687 RCOR1Q9UKL0 485 aa23.75■■□□□ 1.39
CMTM4-201ENST00000330687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.75■■□□□ 1.39
CMTM4-201ENST00000330687 USHBP1Q8N6Y0 703 aa23.75■■□□□ 1.39
CMTM4-201ENST00000330687 MAP2P11137 1827 aaKnown RBP23.75■■□□□ 1.39
CMTM4-201ENST00000330687 TOGARAM2Q6ZUX3 1019 aa23.75■■□□□ 1.39
CMTM4-201ENST00000330687 EAF2Q96CJ1 260 aaPredicted RBP23.75■■□□□ 1.39
CMTM4-201ENST00000330687 HINFPQ9BQA5 517 aa23.75■■□□□ 1.39
CMTM4-201ENST00000330687 TTC41PQ6P2S7 1318 aa23.75■■□□□ 1.39
CMTM4-201ENST00000330687 MYCNP04198 464 aaPredicted RBP23.74■■□□□ 1.39
CMTM4-201ENST00000330687 MNAT1P51948 309 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 C14orf37Q86TY3 774 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 DNAAF4Q8WXU2 420 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 CLIC4Q9Y696 253 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 CHMP4BP1P59074 171 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 KIF4BQ2VIQ3 1234 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 ERCC6L2Q5T890 1561 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 WASLO00401 505 aaPredicted RBP23.74■■□□□ 1.39
CMTM4-201ENST00000330687 SYNE3Q6ZMZ3 975 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 CCDC61Q9Y6R9 512 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 ADCY9O60503 1353 aa23.74■■□□□ 1.39
CMTM4-201ENST00000330687 VWA3AA6NCI4 1184 aa23.73■■□□□ 1.39
CMTM4-201ENST00000330687 ZC3H13Q5T200 1668 aaKnown RBP23.73■■□□□ 1.39
CMTM4-201ENST00000330687 BAG1Q99933 345 aaPredicted RBP23.73■■□□□ 1.39
CMTM4-201ENST00000330687 POGZQ7Z3K3 1410 aa23.73■■□□□ 1.39
CMTM4-201ENST00000330687 LIG3P49916 1009 aa23.72■■□□□ 1.39
CMTM4-201ENST00000330687 EIF3JO75822 258 aaKnown RBP23.72■■□□□ 1.39
CMTM4-201ENST00000330687 CNNM3Q8NE01 707 aa23.72■■□□□ 1.39
CMTM4-201ENST00000330687 SIRT1Q96EB6 747 aa23.72■■□□□ 1.39
CMTM4-201ENST00000330687 ZNF202O95125 648 aa23.72■■□□□ 1.39
CMTM4-201ENST00000330687 MAGEA9P43362 315 aa23.72■■□□□ 1.39
CMTM4-201ENST00000330687 POLA2Q14181 598 aa23.72■■□□□ 1.39
CMTM4-201ENST00000330687 DHX8Q14562 1220 aaKnown RBP23.72■■□□□ 1.39
CMTM4-201ENST00000330687 MTF1Q14872 753 aa23.71■■□□□ 1.39
CMTM4-201ENST00000330687 ENGASEQ8NFI3 743 aa23.71■■□□□ 1.39
CMTM4-201ENST00000330687 FANCLQ9NW38 375 aa23.71■■□□□ 1.39
CMTM4-201ENST00000330687 KLHL34Q8N239 644 aa23.71■■□□□ 1.39
CMTM4-201ENST00000330687 ABCB6Q9NP58 842 aa23.71■■□□□ 1.39
CMTM4-201ENST00000330687 AKAP17AQ02040 695 aaKnown RBP23.71■■□□□ 1.39
CMTM4-201ENST00000330687 ATG3Q9NT62 314 aa23.71■■□□□ 1.39
CMTM4-201ENST00000330687 GUCY2CP25092 1073 aa23.7■■□□□ 1.38
CMTM4-201ENST00000330687 ADD1P35611 737 aaKnown RBP23.7■■□□□ 1.38
CMTM4-201ENST00000330687 TXLNAP40222 546 aa23.7■■□□□ 1.38
CMTM4-201ENST00000330687 NBPF6Q5VWK0 638 aa23.7■■□□□ 1.38
CMTM4-201ENST00000330687 DDX46Q7L014 1031 aaKnown RBP23.7■■□□□ 1.38
CMTM4-201ENST00000330687 NBPF4Q96M43 638 aa23.7■■□□□ 1.38
CMTM4-201ENST00000330687 FMR1NBQ8N0W7 255 aaPredicted RBP23.7■■□□□ 1.38
CMTM4-201ENST00000330687 MPHOSPH8Q99549 860 aa23.7■■□□□ 1.38
CMTM4-201ENST00000330687 ATP7BP35670 1465 aa23.7■■□□□ 1.38
CMTM4-201ENST00000330687 HDXQ7Z353 690 aa23.69■■□□□ 1.38
CMTM4-201ENST00000330687 NCAPGQ9BPX3 1015 aa23.69■■□□□ 1.38
CMTM4-201ENST00000330687 HIP1O00291 1037 aa23.69■■□□□ 1.38
CMTM4-201ENST00000330687 PNOCQ13519 176 aa23.69■■□□□ 1.38
CMTM4-201ENST00000330687 NSUN7Q8NE18 718 aaKnown RBP23.69■■□□□ 1.38
CMTM4-201ENST00000330687 PPM1EQ8WY54 764 aa23.69■■□□□ 1.38
CMTM4-201ENST00000330687 RABGGTAQ92696 567 aa23.69■■□□□ 1.38
CMTM4-201ENST00000330687 FAM204AQ9H8W3 233 aa23.69■■□□□ 1.38
CMTM4-201ENST00000330687 GEMIN8Q9NWZ8 242 aaKnown RBP23.69■■□□□ 1.38
CMTM4-201ENST00000330687 GNAT3A8MTJ3 354 aa23.68■■□□□ 1.38
CMTM4-201ENST00000330687 OLFM4Q6UX06 510 aa23.68■■□□□ 1.38
CMTM4-201ENST00000330687 ERLIN1O75477 346 aa23.68■■□□□ 1.38
CMTM4-201ENST00000330687 TRMT44Q8IYL2 757 aaKnown RBP23.68■■□□□ 1.38
CMTM4-201ENST00000330687 SPTLC2O15270 562 aa23.68■■□□□ 1.38
CMTM4-201ENST00000330687 ATP8B1O43520 1251 aa23.68■■□□□ 1.38
CMTM4-201ENST00000330687 ZNF569Q5MCW4 686 aa23.68■■□□□ 1.38
CMTM4-201ENST00000330687 CRB1P82279 1406 aa23.68■■□□□ 1.38
CMTM4-201ENST00000330687 CDK12Q9NYV4 1490 aaPredicted RBP23.67■■□□□ 1.38
CMTM4-201ENST00000330687 A0A0U1RQJ8 604 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 SPECC1Q5M775 1068 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 ATRIPQ8WXE1 791 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 MRFAP1Q9Y605 127 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 CYP21A2P08686 494 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 NLRP12P59046 1061 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 LONRF3Q496Y0 759 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 AXDND1Q5T1B0 1012 aaPredicted RBP23.67■■□□□ 1.38
CMTM4-201ENST00000330687 PNKPQ96T60 521 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 EYA1Q99502 592 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 GPHNQ9NQX3 736 aaPredicted RBP23.67■■□□□ 1.38
CMTM4-201ENST00000330687 AKAP2Q9Y2D5 859 aa23.67■■□□□ 1.38
CMTM4-201ENST00000330687 CBFA2T2O43439 604 aa23.66■■□□□ 1.38
CMTM4-201ENST00000330687 DLG5Q8TDM6 1919 aa23.66■■□□□ 1.38
CMTM4-201ENST00000330687 ARHGAP6O43182 974 aa23.66■■□□□ 1.38
CMTM4-201ENST00000330687 TAF5LO75529 589 aa23.66■■□□□ 1.38
CMTM4-201ENST00000330687 MAP3K9P80192 1104 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms