RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 ANKRD13DQ6ZTN6 518 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 HEG1Q9ULI3 1381 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
SSBP3-201ENST00000326956 TAF3Q5VWG9 929 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 STOX1Q6ZVD7 989 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 PDIA6Q15084 440 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 KMT5BQ4FZB7 885 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 ZNF790Q6PG37 636 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 ENGASEQ8NFI3 743 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 FMNL2Q96PY5 1086 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 IMPACTQ9P2X3 320 aa17.03■□□□□ 0.32
SSBP3-201ENST00000326956 GOLIM4O00461 696 aa17.02■□□□□ 0.32
SSBP3-201ENST00000326956 SFPQP23246 707 aaKnown RBP eCLIP17.02■□□□□ 0.32
SSBP3-201ENST00000326956 A0A1B0GVL5 298 aa17.02■□□□□ 0.31
SSBP3-201ENST00000326956 CTDNEP1O95476 244 aa17.02■□□□□ 0.31
SSBP3-201ENST00000326956 TMC6Q7Z403 805 aa17.02■□□□□ 0.31
SSBP3-201ENST00000326956 CCDC150Q8NCX0 1101 aa17.02■□□□□ 0.31
SSBP3-201ENST00000326956 PXDNQ92626 1479 aa17.02■□□□□ 0.31
SSBP3-201ENST00000326956 MARF1Q9Y4F3 1742 aaKnown RBP17.01■□□□□ 0.31
SSBP3-201ENST00000326956 GCP02774 474 aa17.01■□□□□ 0.31
SSBP3-201ENST00000326956 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
SSBP3-201ENST00000326956 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
SSBP3-201ENST00000326956 DHX8Q14562 1220 aaKnown RBP17.01■□□□□ 0.31
SSBP3-201ENST00000326956 HOMER1Q86YM7 354 aa17.01■□□□□ 0.31
SSBP3-201ENST00000326956 HELLSQ9NRZ9 838 aa17.01■□□□□ 0.31
SSBP3-201ENST00000326956 OVOS2A0A0G2JMS6 1433 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 SH3TC1Q8TE82 1336 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 A0A087WZG4 1122 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 ADALQ6DHV7 355 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 CHST3Q7LGC8 479 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 RBM33Q96EV2 1170 aaKnown RBP17■□□□□ 0.31
SSBP3-201ENST00000326956 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 IFNKQ9P0W0 207 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 OSBPL5Q9H0X9 879 aaPredicted RBP17■□□□□ 0.31
SSBP3-201ENST00000326956 PAG1Q9NWQ8 432 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 ARHGAP23Q9P227 1491 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 E7EWF7 191 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 FBXO38Q6PIJ6 1188 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 SYNE3Q6ZMZ3 975 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 FMR1NBQ8N0W7 255 aaPredicted RBP17■□□□□ 0.31
SSBP3-201ENST00000326956 ZNF274Q96GC6 653 aaPredicted RBP17■□□□□ 0.31
SSBP3-201ENST00000326956 KIAA1468Q9P260 1216 aa17■□□□□ 0.31
SSBP3-201ENST00000326956 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
SSBP3-201ENST00000326956 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
SSBP3-201ENST00000326956 SLC3A2P08195 630 aaKnown RBP16.99■□□□□ 0.31
SSBP3-201ENST00000326956 PDIA3P30101 505 aaKnown RBP16.99■□□□□ 0.31
SSBP3-201ENST00000326956 TTC5Q8N0Z6 440 aa16.99■□□□□ 0.31
SSBP3-201ENST00000326956 KCNG4Q8TDN1 519 aa16.99■□□□□ 0.31
SSBP3-201ENST00000326956 RAPGEF4Q8WZA2 1011 aa16.99■□□□□ 0.31
SSBP3-201ENST00000326956 BIN1O00499 593 aa16.99■□□□□ 0.31
SSBP3-201ENST00000326956 POLR3DP05423 398 aaPredicted RBP16.99■□□□□ 0.31
SSBP3-201ENST00000326956 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
SSBP3-201ENST00000326956 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
SSBP3-201ENST00000326956 C8orf76Q96K31 380 aa16.99■□□□□ 0.31
SSBP3-201ENST00000326956 XPO4Q9C0E2 1151 aaKnown RBP16.99■□□□□ 0.31
SSBP3-201ENST00000326956 RTEL1Q9NZ71 1219 aa16.99■□□□□ 0.31
SSBP3-201ENST00000326956 PIP4K2AP48426 406 aaPredicted RBP16.98■□□□□ 0.31
SSBP3-201ENST00000326956 NDUFA8P51970 172 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 EXOSC10Q01780 885 aaKnown RBP16.98■□□□□ 0.31
SSBP3-201ENST00000326956 SYT10Q6XYQ8 523 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 USP54Q70EL1 1684 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 A0A1W2PQ27 194 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 A0A1W2PQ64 194 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 A0A1W2PQD8 194 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 CCDC66A2RUB6 948 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 DHX16O60231 1041 aaKnown RBP16.98■□□□□ 0.31
SSBP3-201ENST00000326956 DPCR1Q3MIW9 517 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 SLFNL1Q499Z3 407 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 NFAT5O94916 1531 aa16.98■□□□□ 0.31
SSBP3-201ENST00000326956 CPLX1O14810 134 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 SLFN14P0C7P3 912 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 LMBR1LQ6UX01 489 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 TERF2Q15554 542 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 NFATC2IPQ8NCF5 419 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 KCND1Q9NSA2 647 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 SPTLC2O15270 562 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 CCP110O43303 1012 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 HSPD1P10809 573 aaKnown RBP16.97■□□□□ 0.31
SSBP3-201ENST00000326956 BMS1Q14692 1282 aaKnown RBP16.97■□□□□ 0.31
SSBP3-201ENST00000326956 OTUD7BQ6GQQ9 843 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 PPP1R13BQ96KQ4 1090 aa16.97■□□□□ 0.31
SSBP3-201ENST00000326956 RGPD2P0DJD1 1756 aa16.96■□□□□ 0.31
SSBP3-201ENST00000326956 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
SSBP3-201ENST00000326956 NBPF11Q86T75 865 aa16.96■□□□□ 0.31
SSBP3-201ENST00000326956 LINC00301Q8NCQ3 95 aa16.96■□□□□ 0.31
SSBP3-201ENST00000326956 AGXT2Q9BYV1 514 aa16.96■□□□□ 0.31
SSBP3-201ENST00000326956 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.31
SSBP3-201ENST00000326956 MRC1P22897 1456 aa16.96■□□□□ 0.31
SSBP3-201ENST00000326956 TUBB4AP04350 444 aa16.96■□□□□ 0.3
SSBP3-201ENST00000326956 IFIT1P09914 478 aaKnown RBP16.96■□□□□ 0.3
SSBP3-201ENST00000326956 ERCC6LQ2NKX8 1250 aa16.96■□□□□ 0.3
SSBP3-201ENST00000326956 RABL6Q3YEC7 729 aaPredicted RBP16.96■□□□□ 0.3
SSBP3-201ENST00000326956 ZMYM1Q5SVZ6 1142 aa16.96■□□□□ 0.3
SSBP3-201ENST00000326956 GORABQ5T7V8 394 aa16.96■□□□□ 0.3
SSBP3-201ENST00000326956 E4F1Q66K89 784 aaPredicted RBP16.96■□□□□ 0.3
SSBP3-201ENST00000326956 SNRPA1P09661 255 aaKnown RBP16.95■□□□□ 0.3
SSBP3-201ENST00000326956 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
SSBP3-201ENST00000326956 ZNF496Q96IT1 587 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms