RNA–Protein interactions for RNA: ENST00000323929.7

MRE11-201, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRE11, Length 6,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-201ENST00000323929 RUFY3Q7L099 469 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 CLTCQ00610 1675 aaKnown RBP8.68□□□□□ -1.02
MRE11-201ENST00000323929 IGSF1Q8N6C5 1336 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 ADGRL3Q9HAR2 1447 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 TNNI2P48788 182 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 CCDC144CPQ8IYA2 1237 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 CCDC150Q8NCX0 1101 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 KCNG4Q8TDN1 519 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 TULP4Q9NRJ4 1543 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 KIF2AO00139 706 aaPredicted RBP8.68□□□□□ -1.02
MRE11-201ENST00000323929 EPB41L2O43491 1005 aaKnown RBP8.68□□□□□ -1.02
MRE11-201ENST00000323929 C8orf34Q49A92 452 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 C16orf71Q8IYS4 520 aaPredicted RBP8.68□□□□□ -1.02
MRE11-201ENST00000323929 PLEKHF1Q96S99 279 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 ALG1Q9BT22 464 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 NBPF7P0C2Y1 421 aaPredicted RBP8.68□□□□□ -1.02
MRE11-201ENST00000323929 UVSSAQ2YD98 709 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 FLAD1Q8NFF5 587 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 RRP36Q96EU6 259 aaKnown RBP8.68□□□□□ -1.02
MRE11-201ENST00000323929 ABCA6Q8N139 1617 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 GCKRQ14397 625 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 JAKMIP3Q5VZ66 844 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 GTPBP4Q9BZE4 634 aaKnown RBP8.68□□□□□ -1.02
MRE11-201ENST00000323929 GGA1Q9UJY5 639 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 NCAPD2Q15021 1401 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 DIP2CQ9Y2E4 1556 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 CARD10Q9BWT7 1032 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 C6orf50Q9HD87 102 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 PRIM1P49642 420 aaKnown RBP8.67□□□□□ -1.02
MRE11-201ENST00000323929 PICALMQ13492 652 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 CFAP100Q494V2 611 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 JDP2Q8WYK2 163 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 DDX17Q92841 729 aaKnown RBP8.67□□□□□ -1.02
MRE11-201ENST00000323929 NEMFO60524 1076 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 HIBADHP31937 336 aaKnown RBP8.67□□□□□ -1.02
MRE11-201ENST00000323929 NF2P35240 595 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 ZSCAN12O43309 604 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 CALML3P27482 149 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 SUCLG2Q96I99 432 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 SH2D4AQ9H788 454 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 CCDC82Q8N4S0 544 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 LPIN2Q92539 896 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 MAP7D2Q96T17 732 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 UFL1O94874 794 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 KRT2P35908 639 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 KIAA1328Q86T90 577 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 TTC6Q86TZ1 520 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 XAGE2Q96GT9 111 aa8.67□□□□□ -1.02
MRE11-201ENST00000323929 SEPT11Q9NVA2 429 aaKnown RBP8.67□□□□□ -1.02
MRE11-201ENST00000323929 A0A1B0GUL7 405 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 B4DLN1 442 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 MRPL12P52815 198 aaKnown RBP8.66□□□□□ -1.02
MRE11-201ENST00000323929 DHX32Q7L7V1 743 aaKnown RBP8.66□□□□□ -1.02
MRE11-201ENST00000323929 SCLT1Q96NL6 688 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 VAT1LQ9HCJ6 419 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 SPA17Q15506 151 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 CCDC102BQ68D86 513 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 VPS36Q86VN1 386 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 DLC1Q96QB1 1528 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 PPRC1Q5VV67 1664 aaKnown RBP8.66□□□□□ -1.02
MRE11-201ENST00000323929 TAF4BQ92750 862 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 INTS4Q96HW7 963 aaKnown RBP8.66□□□□□ -1.02
MRE11-201ENST00000323929 CFAP65Q6ZU64 1925 aaKnown RBP8.66□□□□□ -1.02
MRE11-201ENST00000323929 NEURL1BA8MQ27 555 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 F8W031 263 aaPredicted RBP8.66□□□□□ -1.02
MRE11-201ENST00000323929 HEATR3Q7Z4Q2 680 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 ARHGEF25Q86VW2 580 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 WDR66Q8TBY9 1149 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 THRAP3Q9Y2W1 955 aaKnown RBP8.66□□□□□ -1.02
MRE11-201ENST00000323929 TCIRG1Q13488 830 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 MCM9Q9NXL9 1143 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 NSFL1CQ9UNZ2 370 aaKnown RBP8.66□□□□□ -1.02
MRE11-201ENST00000323929 KDM2BQ8NHM5 1336 aa8.66□□□□□ -1.02
MRE11-201ENST00000323929 RNF123Q5XPI4 1314 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 ERLIN1O75477 346 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 ATL3Q6DD88 541 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 CCDC112Q8NEF3 446 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 FAM89AQ96GI7 184 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 USP26Q9BXU7 913 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 IQSEC3Q9UPP2 1182 aaPredicted RBP8.65□□□□□ -1.02
MRE11-201ENST00000323929 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
MRE11-201ENST00000323929 F13A1P00488 732 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 NAPAP54920 295 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 GSDMDP57764 484 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 BRAPQ7Z569 592 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 DNAJC10Q8IXB1 793 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 STX8Q9UNK0 236 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 AGLP35573 1532 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 TOP1P11387 765 aaKnown RBP8.65□□□□□ -1.02
MRE11-201ENST00000323929 ALDH1B1P30837 517 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 TMEM87BQ96K49 555 aa8.65□□□□□ -1.02
MRE11-201ENST00000323929 WDR17Q8IZU2 1322 aa8.65□□□□□ -1.03
MRE11-201ENST00000323929 MBD4O95243 580 aa8.65□□□□□ -1.03
MRE11-201ENST00000323929 LMOD1P29536 600 aaPredicted RBP8.65□□□□□ -1.03
MRE11-201ENST00000323929 CTSWP56202 376 aa8.65□□□□□ -1.03
MRE11-201ENST00000323929 KLHL40Q2TBA0 621 aa8.65□□□□□ -1.03
MRE11-201ENST00000323929 HOOK2Q96ED9 719 aa8.65□□□□□ -1.03
MRE11-201ENST00000323929 EXOC1Q9NV70 894 aa8.65□□□□□ -1.03
MRE11-201ENST00000323929 H0YIN7 160 aa8.65□□□□□ -1.03
MRE11-201ENST00000323929 RIMBP2O15034 1052 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms