RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 MSANTD4Q8NCY6 345 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 MRVI1Q9Y6F6 885 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 CCDC26Q8TAB7 109 aa19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 THEMISQ8N1K5 641 aaPredicted RBP19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 DNAJC25Q9H1X3 360 aa19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 CASQ2O14958 399 aaPredicted RBP19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 ARHGAP25P42331 645 aa19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 ANKRD24Q8TF21 1146 aa19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 MTUS1Q9ULD2 1270 aa19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 USH1CQ9Y6N9 552 aa19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 HDAC1Q13547 482 aaPredicted RBP19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 IFIT1BQ5T764 474 aaKnown RBP19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 ATP6V0A2Q9Y487 856 aa19.06■□□□□ 0.64
SMCHD1-201ENST00000320876 RPGRQ92834 1020 aaKnown RBP19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 LZTFL1Q9NQ48 299 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 ZBTB43O43298 467 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 PHACTR2O75167 634 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 F13A1P00488 732 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 GTF3C6Q969F1 213 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 EPSTI1Q96J88 318 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 VCXQ9H320 206 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 CALCOCO2Q13137 446 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 HLA-DOAP06340 250 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 FLIIQ13045 1269 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 ASXL1Q8IXJ9 1541 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 ASIC1P78348 528 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 PPP2R3AQ06190 1150 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 ZNF569Q5MCW4 686 aa19.05■□□□□ 0.64
SMCHD1-201ENST00000320876 PRIM1P49642 420 aaKnown RBP19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 NEDD9Q14511 834 aa19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 HSP90AA4PQ58FG1 418 aa19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 RTN1Q16799 776 aa19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 CCDC25Q86WR0 208 aa19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 SMIM23A6NLE4 172 aa19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 ARID5AQ03989 594 aa19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 UTP11Q9Y3A2 253 aaKnown RBP19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 GAS8O95995 478 aa19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 DACT1Q9NYF0 836 aa19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 CCDC184Q52MB2 194 aa19.04■□□□□ 0.64
SMCHD1-201ENST00000320876 GSTO1P78417 241 aa19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 SEL1L2Q5TEA6 688 aa19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.03■□□□□ 0.645e-9■■■■□ 21.4
SMCHD1-201ENST00000320876 TTC21BQ7Z4L5 1316 aa19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 TMEM110-MUSTN1A8MSY1 372 aa19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 LMOD1P29536 600 aaPredicted RBP19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 CLNS1AP54105 237 aaKnown RBP19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 CRNKL1Q9BZJ0 848 aaKnown RBP19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 ZNF853P0CG23 659 aa19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 MAK16Q9BXY0 300 aaKnown RBP19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 HDAC9Q9UKV0 1011 aa19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 RGS22Q8NE09 1264 aa19.03■□□□□ 0.64
SMCHD1-201ENST00000320876 INPP5BP32019 993 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 PLCB3Q01970 1234 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 PHLDB2Q86SQ0 1253 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 GBP7Q8N8V2 638 aaPredicted RBP19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 CCDC62Q6P9F0 684 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 IQGAP2Q13576 1575 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 ZNF354CQ86Y25 554 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 ERO1AQ96HE7 468 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 THUMPD2Q9BTF0 503 aaKnown RBP19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 CSRNP2Q9H175 543 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 MAP3K2Q9Y2U5 619 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 TRAF1Q13077 416 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 SH2D4BQ5SQS7 431 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 GOLGA6CA6NDK9 693 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 GOLGA6DP0CG33 693 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 GOLGA6AQ9NYA3 693 aa19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 TROQ12816 1431 aaPredicted RBP19.02■□□□□ 0.64
SMCHD1-201ENST00000320876 C11orf95C9JLR9 678 aaPredicted RBP19.02■□□□□ 0.63
SMCHD1-201ENST00000320876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.02■□□□□ 0.637e-14■■■□□ 18.9
SMCHD1-201ENST00000320876 NUF2Q9BZD4 464 aa19.02■□□□□ 0.63
SMCHD1-201ENST00000320876 IL16Q14005 1332 aa19.02■□□□□ 0.63
SMCHD1-201ENST00000320876 HAND2P61296 217 aa19.02■□□□□ 0.63
SMCHD1-201ENST00000320876 CYB5RLQ6IPT4 315 aa19.02■□□□□ 0.63
SMCHD1-201ENST00000320876 TAOK1Q7L7X3 1001 aa19.02■□□□□ 0.63
SMCHD1-201ENST00000320876 RTL9Q8NET4 1388 aa19.02■□□□□ 0.63
SMCHD1-201ENST00000320876 F6X3S4 739 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 SPTLC2O15270 562 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 TSPY3P0CV98 308 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 TSPY8P0CW00 308 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 DNM1Q05193 864 aaKnown RBP19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 BAG1Q99933 345 aaPredicted RBP19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 KLF18A0A0U1RQI7 1052 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 HPDP32754 393 aaPredicted RBP19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 TRMT112Q9UI30 125 aaKnown RBP19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 GIGYF1O75420 1035 aaPredicted RBP19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 OSCARQ8IYS5 282 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 ARHGAP24Q8N264 748 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 ESR2Q92731 530 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 SH3BGRP55822 239 aaPredicted RBP19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 RAB3GAP1Q15042 981 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 SEPT14Q6ZU15 432 aa19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 VIMP08670 466 aaKnown RBP19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 CDC5LQ99459 802 aaKnown RBP19.01■□□□□ 0.63
SMCHD1-201ENST00000320876 NDUFAB1O14561 156 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 ACTN4O43707 911 aaKnown RBP19■□□□□ 0.63
SMCHD1-201ENST00000320876 TRIM14Q14142 442 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms