RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 VPS37DQ86XT2 251 aa33.43■■■□□ 2.94
CTDNEP1-201ENST00000318988 ZNF219Q9P2Y4 722 aaPredicted RBP33.43■■■□□ 2.94
CTDNEP1-201ENST00000318988 UQCRFS1P1P0C7P4 283 aa33.43■■■□□ 2.94
CTDNEP1-201ENST00000318988 CCDC102BQ68D86 513 aa33.43■■■□□ 2.94
CTDNEP1-201ENST00000318988 DPP8Q6V1X1 898 aaPredicted RBP33.43■■■□□ 2.94
CTDNEP1-201ENST00000318988 SLC51AQ86UW1 340 aa33.43■■■□□ 2.94
CTDNEP1-201ENST00000318988 A0A1B0GUL6 1792 aa33.42■■■□□ 2.94
CTDNEP1-201ENST00000318988 C6orf229H3BNL8 230 aa33.42■■■□□ 2.94
CTDNEP1-201ENST00000318988 GNL3LQ9NVN8 582 aaKnown RBP33.42■■■□□ 2.94
CTDNEP1-201ENST00000318988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.41■■■□□ 2.94
CTDNEP1-201ENST00000318988 RILPL2Q969X0 211 aa33.41■■■□□ 2.94
CTDNEP1-201ENST00000318988 DLEC1Q9Y238 1755 aa33.41■■■□□ 2.94
CTDNEP1-201ENST00000318988 WTIPA6NIX2 430 aaPredicted RBP33.4■■■□□ 2.94
CTDNEP1-201ENST00000318988 SDSP20132 328 aa33.4■■■□□ 2.94
CTDNEP1-201ENST00000318988 PHKA1P46020 1223 aa33.4■■■□□ 2.94
CTDNEP1-201ENST00000318988 CNTROBQ8N137 903 aa33.4■■■□□ 2.94
CTDNEP1-201ENST00000318988 LRRC37AA6NMS7 1700 aa33.39■■■□□ 2.94
CTDNEP1-201ENST00000318988 MAP4K4O95819 1239 aaPredicted RBP33.39■■■□□ 2.94
CTDNEP1-201ENST00000318988 BCAMP50895 628 aa33.39■■■□□ 2.94
CTDNEP1-201ENST00000318988 DALRD3Q5D0E6 543 aaKnown RBP33.39■■■□□ 2.94
CTDNEP1-201ENST00000318988 TBC1D16Q8TBP0 767 aa33.39■■■□□ 2.94
CTDNEP1-201ENST00000318988 ZNF512BQ96KM6 892 aaPredicted RBP33.39■■■□□ 2.94
CTDNEP1-201ENST00000318988 GRIPAP1Q4V328 841 aa33.38■■■□□ 2.93
CTDNEP1-201ENST00000318988 OLFM4Q6UX06 510 aa33.38■■■□□ 2.93
CTDNEP1-201ENST00000318988 DNAJC2Q99543 621 aaKnown RBP33.38■■■□□ 2.93
CTDNEP1-201ENST00000318988 HAUS7Q99871 368 aa33.38■■■□□ 2.93
CTDNEP1-201ENST00000318988 CACNA1SQ13698 1873 aa33.38■■■□□ 2.93
CTDNEP1-201ENST00000318988 ARAP2Q8WZ64 1704 aa33.38■■■□□ 2.93
CTDNEP1-201ENST00000318988 C21orf2O43822 256 aa33.38■■■□□ 2.93
CTDNEP1-201ENST00000318988 GYG1P46976 350 aa33.38■■■□□ 2.93
CTDNEP1-201ENST00000318988 SLX4Q8IY92 1834 aa33.38■■■□□ 2.93
CTDNEP1-201ENST00000318988 HIBADHP31937 336 aaKnown RBP33.37■■■□□ 2.93
CTDNEP1-201ENST00000318988 C7orf43Q8WVR3 580 aa33.37■■■□□ 2.93
CTDNEP1-201ENST00000318988 POLLQ9UGP5 575 aa33.37■■■□□ 2.93
CTDNEP1-201ENST00000318988 ARID4AP29374 1257 aaPredicted RBP33.36■■■□□ 2.93
CTDNEP1-201ENST00000318988 SOGA3Q5TF21 947 aa33.36■■■□□ 2.93
CTDNEP1-201ENST00000318988 EVI5LQ96CN4 794 aa33.36■■■□□ 2.93
CTDNEP1-201ENST00000318988 FAM84BQ96KN1 310 aaPredicted RBP33.36■■■□□ 2.93
CTDNEP1-201ENST00000318988 CCDC93Q567U6 631 aa33.35■■■□□ 2.93
CTDNEP1-201ENST00000318988 C15orf52Q6ZUT6 534 aaKnown RBP33.35■■■□□ 2.93
CTDNEP1-201ENST00000318988 EYA3Q99504 573 aa33.35■■■□□ 2.93
CTDNEP1-201ENST00000318988 KLRK1P26718 216 aa33.34■■■□□ 2.93
CTDNEP1-201ENST00000318988 FKBP4Q02790 459 aaKnown RBP eCLIP33.34■■■□□ 2.93
CTDNEP1-201ENST00000318988 ZNF804AQ7Z570 1209 aa33.34■■■□□ 2.93
CTDNEP1-201ENST00000318988 FBXO33Q7Z6M2 555 aa33.34■■■□□ 2.93
CTDNEP1-201ENST00000318988 FRAT2O75474 233 aaPredicted RBP33.33■■■□□ 2.93
CTDNEP1-201ENST00000318988 RTKN2Q8IZC4 609 aa33.33■■■□□ 2.93
CTDNEP1-201ENST00000318988 GPR101Q96P66 508 aaPredicted RBP33.33■■■□□ 2.93
CTDNEP1-201ENST00000318988 MED23Q9ULK4 1368 aa33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 KIAA1551Q9HCM1 1747 aa33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 CDC45O75419 566 aa33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 CASC1Q6TDU7 716 aa33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 SUPT20HQ8NEM7 779 aa33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 FHDC1Q9C0D6 1143 aaPredicted RBP33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 ZC3H12CQ9C0D7 883 aaKnown RBP33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 SNRKQ9NRH2 765 aa33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 PAG1Q9NWQ8 432 aa33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 WWC3Q9ULE0 1092 aa33.32■■■□□ 2.92
CTDNEP1-201ENST00000318988 MCAMP43121 646 aa33.31■■■□□ 2.92
CTDNEP1-201ENST00000318988 GOLIM4O00461 696 aa33.3■■■□□ 2.92
CTDNEP1-201ENST00000318988 SCARF1Q14162 830 aa33.3■■■□□ 2.92
CTDNEP1-201ENST00000318988 TXNRD3Q86VQ6 643 aa33.3■■■□□ 2.92
CTDNEP1-201ENST00000318988 NLGN2Q8NFZ4 835 aa33.3■■■□□ 2.92
CTDNEP1-201ENST00000318988 NDUFB9Q9Y6M9 179 aa33.3■■■□□ 2.92
CTDNEP1-201ENST00000318988 SEMA3EO15041 775 aa33.29■■■□□ 2.92
CTDNEP1-201ENST00000318988 WASHC4Q2M389 1173 aa33.29■■■□□ 2.92
CTDNEP1-201ENST00000318988 SPATA5Q8NB90 893 aa33.29■■■□□ 2.92
CTDNEP1-201ENST00000318988 DENND2AQ9ULE3 1009 aa33.29■■■□□ 2.92
CTDNEP1-201ENST00000318988 BCS1LQ9Y276 419 aa33.29■■■□□ 2.92
CTDNEP1-201ENST00000318988 IRS2Q9Y4H2 1338 aa33.29■■■□□ 2.92
CTDNEP1-201ENST00000318988 G3V3G9 751 aa33.28■■■□□ 2.92
CTDNEP1-201ENST00000318988 ZAP70P43403 619 aa33.28■■■□□ 2.92
CTDNEP1-201ENST00000318988 RASGRF1Q13972 1273 aa33.28■■■□□ 2.92
CTDNEP1-201ENST00000318988 DCAF8Q5TAQ9 597 aa33.28■■■□□ 2.92
CTDNEP1-201ENST00000318988 FSD1Q9BTV5 496 aa33.28■■■□□ 2.92
CTDNEP1-201ENST00000318988 HMG20BQ9P0W2 317 aa33.28■■■□□ 2.92
CTDNEP1-201ENST00000318988 IQSEC3Q9UPP2 1182 aaPredicted RBP33.28■■■□□ 2.92
CTDNEP1-201ENST00000318988 RIMBP2O15034 1052 aa33.28■■■□□ 2.92
CTDNEP1-201ENST00000318988 RTFDC1Q9BY42 306 aaPredicted RBP33.28■■■□□ 2.92
CTDNEP1-201ENST00000318988 LTBP1Q14766 1721 aa33.27■■■□□ 2.92
CTDNEP1-201ENST00000318988 TTF1Q15361 905 aaPredicted RBP33.27■■■□□ 2.92
CTDNEP1-201ENST00000318988 EDC3Q96F86 508 aaKnown RBP33.27■■■□□ 2.92
CTDNEP1-201ENST00000318988 C8orf34Q49A92 452 aa33.26■■■□□ 2.91
CTDNEP1-201ENST00000318988 PI16Q6UXB8 463 aa33.26■■■□□ 2.91
CTDNEP1-201ENST00000318988 HIP1O00291 1037 aa33.23■■■□□ 2.91
CTDNEP1-201ENST00000318988 LRRFIP1Q32MZ4 808 aaKnown RBP33.23■■■□□ 2.91
CTDNEP1-201ENST00000318988 TBC1D9Q6ZT07 1266 aa33.23■■■□□ 2.91
CTDNEP1-201ENST00000318988 KBTBD3Q8NAB2 608 aa33.23■■■□□ 2.91
CTDNEP1-201ENST00000318988 PSMD1Q99460 953 aa33.23■■■□□ 2.91
CTDNEP1-201ENST00000318988 COA1Q9GZY4 146 aa33.23■■■□□ 2.91
CTDNEP1-201ENST00000318988 CD209Q9NNX6 404 aa33.23■■■□□ 2.91
CTDNEP1-201ENST00000318988 DUOX1Q9NRD9 1551 aa33.23■■■□□ 2.91
CTDNEP1-201ENST00000318988 TDRD7Q8NHU6 1098 aaKnown RBP33.22■■■□□ 2.91
CTDNEP1-201ENST00000318988 DIAPH3Q9NSV4 1193 aa33.22■■■□□ 2.91
CTDNEP1-201ENST00000318988 CYP2E1P05181 493 aaPredicted RBP33.21■■■□□ 2.91
CTDNEP1-201ENST00000318988 SYT17Q9BSW7 474 aa33.21■■■□□ 2.91
CTDNEP1-201ENST00000318988 BACH2Q9BYV9 841 aa33.21■■■□□ 2.91
CTDNEP1-201ENST00000318988 ANTXR1Q9H6X2 564 aa33.21■■■□□ 2.91
CTDNEP1-201ENST00000318988 PDS5AQ29RF7 1337 aaKnown RBP33.2■■■□□ 2.91
CTDNEP1-201ENST00000318988 ZBTB22O15209 634 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms