RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 CARD6Q9BX69 1037 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 AXIN2Q9Y2T1 843 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 USP31Q70CQ4 1352 aa11.23□□□□□ -0.61
RPGR-201ENST00000318842 ATP2B1P20020 1258 aa11.23□□□□□ -0.61
RPGR-201ENST00000318842 RNF20Q5VTR2 975 aa11.23□□□□□ -0.61
RPGR-201ENST00000318842 FEZ1Q99689 392 aa11.23□□□□□ -0.61
RPGR-201ENST00000318842 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
RPGR-201ENST00000318842 DBF4Q9UBU7 674 aaPredicted RBP11.23□□□□□ -0.61
RPGR-201ENST00000318842 SETD1AO15047 1707 aaKnown RBP11.23□□□□□ -0.61
RPGR-201ENST00000318842 MROH7-TTC4A0A0A0MT08 1334 aa11.23□□□□□ -0.61
RPGR-201ENST00000318842 FDPSP14324 419 aaKnown RBP11.23□□□□□ -0.61
RPGR-201ENST00000318842 GRAMD1CQ8IYS0 662 aa11.23□□□□□ -0.61
RPGR-201ENST00000318842 SENP2Q9HC62 589 aa11.23□□□□□ -0.61
RPGR-201ENST00000318842 PAXBP1Q9Y5B6 917 aa11.23□□□□□ -0.61
RPGR-201ENST00000318842 SLU7O95391 586 aaKnown RBP11.22□□□□□ -0.61
RPGR-201ENST00000318842 HNRNPH2P55795 449 aaKnown RBP11.22□□□□□ -0.61
RPGR-201ENST00000318842 FKBP4Q02790 459 aaKnown RBP eCLIP11.22□□□□□ -0.61
RPGR-201ENST00000318842 PNOCQ13519 176 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 KARSQ15046 597 aaKnown RBP11.22□□□□□ -0.61
RPGR-201ENST00000318842 RBM43Q6ZSC3 357 aaKnown RBP11.22□□□□□ -0.61
RPGR-201ENST00000318842 TRMT44Q8IYL2 757 aaKnown RBP11.22□□□□□ -0.61
RPGR-201ENST00000318842 PDILTQ8N807 584 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 PLEKHA4Q9H4M7 779 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 FHOD1Q9Y613 1164 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 MED23Q9ULK4 1368 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 SASH3O75995 380 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 TPM3P06753 285 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 PLA2G4AP47712 749 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 HSP90AB4PQ58FF6 505 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 NFATC2IPQ8NCF5 419 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 ESCO1Q5FWF5 840 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 CMTR1Q8N1G2 835 aaKnown RBP11.22□□□□□ -0.61
RPGR-201ENST00000318842 KCNB2Q92953 911 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 SUGCTQ9HAC7 445 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 RGPD1P0DJD0 1748 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 RICTORQ6R327 1708 aa11.22□□□□□ -0.61
RPGR-201ENST00000318842 CDC27P30260 824 aa11.21□□□□□ -0.61
RPGR-201ENST00000318842 ADKP55263 362 aaKnown RBP11.21□□□□□ -0.61
RPGR-201ENST00000318842 MTF1Q14872 753 aa11.21□□□□□ -0.61
RPGR-201ENST00000318842 LRRC24Q50LG9 513 aa11.21□□□□□ -0.61
RPGR-201ENST00000318842 TNNI3KQ59H18 835 aa11.21□□□□□ -0.61
RPGR-201ENST00000318842 PAXIP1Q6ZW49 1069 aaPredicted RBP11.21□□□□□ -0.61
RPGR-201ENST00000318842 ENGASEQ8NFI3 743 aa11.21□□□□□ -0.61
RPGR-201ENST00000318842 WDR24Q96S15 920 aa11.21□□□□□ -0.61
RPGR-201ENST00000318842 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.61
RPGR-201ENST00000318842 PUS3Q9BZE2 481 aaKnown RBP11.21□□□□□ -0.61
RPGR-201ENST00000318842 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.61
RPGR-201ENST00000318842 LCMT1Q9UIC8 334 aa11.21□□□□□ -0.61
RPGR-201ENST00000318842 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.61
RPGR-201ENST00000318842 ADAMTS13Q76LX8 1427 aa11.21□□□□□ -0.61
RPGR-201ENST00000318842 WDHD1O75717 1129 aaPredicted RBP11.21□□□□□ -0.62
RPGR-201ENST00000318842 PNMA6AP0CW24 399 aaPredicted RBP11.21□□□□□ -0.62
RPGR-201ENST00000318842 PDIA6Q15084 440 aa11.21□□□□□ -0.62
RPGR-201ENST00000318842 STK38Q15208 465 aa11.21□□□□□ -0.62
RPGR-201ENST00000318842 TEX35Q5T0J7 233 aa11.21□□□□□ -0.62
RPGR-201ENST00000318842 CEP57L1Q8IYX8 460 aa11.21□□□□□ -0.62
RPGR-201ENST00000318842 IPO4Q8TEX9 1081 aaKnown RBP11.21□□□□□ -0.62
RPGR-201ENST00000318842 PHKBQ93100 1093 aa11.21□□□□□ -0.62
RPGR-201ENST00000318842 M0R2C6 588 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 TRIM66O15016 1216 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 RNMTO43148 476 aaKnown RBP11.2□□□□□ -0.62
RPGR-201ENST00000318842 CASP1P29466 404 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 LMBR1LQ6UX01 489 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 USP42Q9H9J4 1324 aaKnown RBP11.2□□□□□ -0.62
RPGR-201ENST00000318842 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
RPGR-201ENST00000318842 FAM160A1Q05DH4 1040 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 LONRF3Q496Y0 759 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 C1orf141Q5JVX7 400 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 GPIHBP1Q8IV16 184 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 CPLX3Q8WVH0 158 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 AKAP12Q02952 1782 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 NEURL1BA8MQ27 555 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 E7EWF7 191 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 CDK11BP21127 795 aaKnown RBP11.2□□□□□ -0.62
RPGR-201ENST00000318842 SFPQP23246 707 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPGR-201ENST00000318842 PDIA3P30101 505 aaKnown RBP11.2□□□□□ -0.62
RPGR-201ENST00000318842 FMR1NBQ8N0W7 255 aaPredicted RBP11.2□□□□□ -0.62
RPGR-201ENST00000318842 SMARCE1Q969G3 411 aa11.2□□□□□ -0.62
RPGR-201ENST00000318842 A0A087WZG4 1122 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 PPARDQ03181 441 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 GRIN1Q05586 938 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 ZRSR1Q15695 479 aaKnown RBP11.19□□□□□ -0.62
RPGR-201ENST00000318842 CFAP100Q494V2 611 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 MRFAP1L1Q96HT8 127 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 ZNF496Q96IT1 587 aaPredicted RBP11.19□□□□□ -0.62
RPGR-201ENST00000318842 ORAI2Q96SN7 254 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 TMEM2Q9UHN6 1383 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 NEDD4P46934 1319 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 PDE4BQ07343 736 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 GCKRQ14397 625 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 KCTD19Q17RG1 926 aaPredicted RBP11.19□□□□□ -0.62
RPGR-201ENST00000318842 WASHC4Q2M389 1173 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 CREBRFQ8IUR6 639 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 ERO1AQ96HE7 468 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 CFAP45Q9UL16 551 aa11.19□□□□□ -0.62
RPGR-201ENST00000318842 PALLDQ8WX93 1383 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 PHACTR2O75167 634 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 ABL1P00519 1130 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms