RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 TSPY26PQ9H489 355 aa7.35□□□□□ -1.23
EXD1-201ENST00000314992 TSPYL4Q9UJ04 414 aa7.35□□□□□ -1.23
EXD1-201ENST00000314992 CACNA1SQ13698 1873 aa7.35□□□□□ -1.23
EXD1-201ENST00000314992 FLIIQ13045 1269 aa7.34□□□□□ -1.23
EXD1-201ENST00000314992 HSP90AB2PQ58FF8 381 aa7.34□□□□□ -1.23
EXD1-201ENST00000314992 TM6SF1Q9BZW5 370 aa7.34□□□□□ -1.23
EXD1-201ENST00000314992 SNRKQ9NRH2 765 aa7.34□□□□□ -1.23
EXD1-201ENST00000314992 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.34□□□□□ -1.23
EXD1-201ENST00000314992 RBM27Q9P2N5 1060 aaKnown RBP7.34□□□□□ -1.23
EXD1-201ENST00000314992 CEMIPQ8WUJ3 1361 aa7.34□□□□□ -1.23
EXD1-201ENST00000314992 SLC10A3P09131 477 aa7.34□□□□□ -1.23
EXD1-201ENST00000314992 MTX1Q13505 466 aa7.34□□□□□ -1.23
EXD1-201ENST00000314992 RAD50Q92878 1312 aa7.34□□□□□ -1.23
EXD1-201ENST00000314992 CDHR2Q9BYE9 1310 aa7.34□□□□□ -1.23
EXD1-201ENST00000314992 CYP27B1O15528 508 aa7.34□□□□□ -1.24
EXD1-201ENST00000314992 HSP90AB4PQ58FF6 505 aa7.34□□□□□ -1.24
EXD1-201ENST00000314992 TTC41PQ6P2S7 1318 aa7.34□□□□□ -1.24
EXD1-201ENST00000314992 SASS6Q6UVJ0 657 aa7.34□□□□□ -1.24
EXD1-201ENST00000314992 SLC4A9Q96Q91 983 aa7.34□□□□□ -1.24
EXD1-201ENST00000314992 ALDH8A1Q9H2A2 487 aaPredicted RBP7.34□□□□□ -1.24
EXD1-201ENST00000314992 ATG3Q9NT62 314 aa7.34□□□□□ -1.24
EXD1-201ENST00000314992 ZHX1Q9UKY1 873 aaPredicted RBP7.34□□□□□ -1.24
EXD1-201ENST00000314992 COL2A1P02458 1487 aaPredicted RBP7.33□□□□□ -1.24
EXD1-201ENST00000314992 GNAT3A8MTJ3 354 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 H0YGN5 161 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 H0YIN7 160 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 SGSM2O43147 1006 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 GTF2F1P35269 517 aaKnown RBP eCLIP7.33□□□□□ -1.24
EXD1-201ENST00000314992 ATP6V1AP38606 617 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 FKBP4Q02790 459 aaKnown RBP eCLIP7.33□□□□□ -1.24
EXD1-201ENST00000314992 C2CD5Q86YS7 1000 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 USP44Q9H0E7 712 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 POTEFA5A3E0 1075 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 TPM3P06753 285 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 TAF7Q15545 349 aaPredicted RBP7.33□□□□□ -1.24
EXD1-201ENST00000314992 EAPPQ56P03 285 aaPredicted RBP7.33□□□□□ -1.24
EXD1-201ENST00000314992 CCDC183Q5T5S1 534 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.33□□□□□ -1.24
EXD1-201ENST00000314992 PI4K2BQ8TCG2 481 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 ZSCAN31Q96LW9 406 aaPredicted RBP7.33□□□□□ -1.24
EXD1-201ENST00000314992 ZIC5Q96T25 663 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 EYA1Q99502 592 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 PALD1Q9ULE6 856 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 ATP6V1DQ9Y5K8 247 aa7.33□□□□□ -1.24
EXD1-201ENST00000314992 CCDC171Q6TFL3 1326 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 PNMA6EA0A0J9YXQ4 647 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 SYCE3A1L190 88 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 CAPN2P17655 700 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 NCLP19338 710 aaKnown RBP7.32□□□□□ -1.24
EXD1-201ENST00000314992 PRIMPOLQ96LW4 560 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 LSG1Q9H089 658 aaKnown RBP7.32□□□□□ -1.24
EXD1-201ENST00000314992 RNF39Q9H2S5 420 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 SPTLC3Q9NUV7 552 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 NSFL1CQ9UNZ2 370 aaKnown RBP7.32□□□□□ -1.24
EXD1-201ENST00000314992 CLEC11AQ9Y240 323 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 UBE2HP62256 183 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 FAM109BQ6ICB4 259 aaPredicted RBP7.32□□□□□ -1.24
EXD1-201ENST00000314992 RGMBQ6NW40 437 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 KIF1BPQ96EK5 621 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 BRIP1Q9BX63 1249 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 HDAC5Q9UQL6 1122 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.32□□□□□ -1.24
EXD1-201ENST00000314992 ZNF609O15014 1411 aa7.32□□□□□ -1.24
EXD1-201ENST00000314992 ZSCAN22P10073 491 aaPredicted RBP7.31□□□□□ -1.24
EXD1-201ENST00000314992 BMP8BP34820 402 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 KIF23Q02241 960 aaPredicted RBP7.31□□□□□ -1.24
EXD1-201ENST00000314992 FUCA2Q9BTY2 467 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 SH2B1Q9NRF2 756 aaPredicted RBP7.31□□□□□ -1.24
EXD1-201ENST00000314992 LIMCH1Q9UPQ0 1083 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 KLRG2A4D1S0 409 aaPredicted RBP7.31□□□□□ -1.24
EXD1-201ENST00000314992 HMGN5P82970 282 aaKnown RBP7.31□□□□□ -1.24
EXD1-201ENST00000314992 CNKSR1Q969H4 720 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 CSRNP1Q96S65 589 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 USP25Q9UHP3 1055 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 EXOC6BQ9Y2D4 811 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 F6X3S4 739 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 HOXC9P31274 260 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 SCNN1DP51172 638 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 VPS53Q5VIR6 699 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 MPRIPQ6WCQ1 1025 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 USP48Q86UV5 1035 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 TICAM2Q86XR7 235 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 PIBF1Q8WXW3 757 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 BBXQ8WY36 941 aaPredicted RBP7.31□□□□□ -1.24
EXD1-201ENST00000314992 SYMPKQ92797 1274 aaKnown RBP7.31□□□□□ -1.24
EXD1-201ENST00000314992 SNX14Q9Y5W7 946 aa7.31□□□□□ -1.24
EXD1-201ENST00000314992 CARMIL3Q8ND23 1372 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 COL4A5P29400 1685 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 UBTFL1P0CB47 393 aaPredicted RBP7.3□□□□□ -1.24
EXD1-201ENST00000314992 PDE6BP35913 854 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 KIAA2012Q0VF49 1180 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 IL17REQ8NFR9 667 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 RHPN1Q8TCX5 695 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 ANO2Q9NQ90 1003 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 LRRFIP2Q9Y608 721 aaKnown RBP7.3□□□□□ -1.24
EXD1-201ENST00000314992 HEG1Q9ULI3 1381 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 ELP1O95163 1332 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 ALDH1L1O75891 902 aa7.3□□□□□ -1.24
EXD1-201ENST00000314992 GLRX3O76003 335 aaKnown RBP7.3□□□□□ -1.24
EXD1-201ENST00000314992 CELF2O95319 508 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms