RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 C6orf229H3BNL8 230 aa15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 IFIT1P09914 478 aaKnown RBP15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 SLC5A1P13866 664 aa15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 KCNJ4P48050 445 aa15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 PRELPP51888 382 aa15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 TIMM10P62072 90 aa15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 GPR162Q16538 588 aa15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 ANKRD45Q5TZF3 282 aa15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 TXNRD3Q86VQ6 643 aa15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 CLASRPQ8N2M8 674 aaKnown RBP15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 GPR101Q96P66 508 aaPredicted RBP15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 VPS33BQ9H267 617 aa15.58■□□□□ 0.08
CHMP2A-201ENST00000312547 FER1L6Q2WGJ9 1857 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 GRIN3BO60391 1043 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 ADORA1P30542 326 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 RASSF7Q02833 373 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 KIAA2012Q0VF49 1180 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 ARHGAP27Q6ZUM4 889 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 AACSQ86V21 672 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 CHD1LQ86WJ1 897 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 EYA3Q99504 573 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 GTF3C3Q9Y5Q9 886 aa15.57■□□□□ 0.08
CHMP2A-201ENST00000312547 WASHC4Q2M389 1173 aa15.56■□□□□ 0.08
CHMP2A-201ENST00000312547 FBXO33Q7Z6M2 555 aa15.56■□□□□ 0.08
CHMP2A-201ENST00000312547 XAGE2Q96GT9 111 aa15.56■□□□□ 0.08
CHMP2A-201ENST00000312547 FAM84BQ96KN1 310 aaPredicted RBP15.56■□□□□ 0.08
CHMP2A-201ENST00000312547 CCDC8Q9H0W5 538 aaPredicted RBP15.56■□□□□ 0.08
CHMP2A-201ENST00000312547 ZNF277Q9NRM2 450 aaPredicted RBP15.56■□□□□ 0.08
CHMP2A-201ENST00000312547 TLR7Q9NYK1 1049 aaKnown RBP15.56■□□□□ 0.08
CHMP2A-201ENST00000312547 DBNLQ9UJU6 430 aaKnown RBP15.56■□□□□ 0.08
CHMP2A-201ENST00000312547 SALL3Q9BXA9 1300 aa15.55■□□□□ 0.08
CHMP2A-201ENST00000312547 ZBTB22O15209 634 aa15.55■□□□□ 0.08
CHMP2A-201ENST00000312547 IARSP41252 1262 aaKnown RBP15.55■□□□□ 0.08
CHMP2A-201ENST00000312547 NEUROD6Q96NK8 337 aa15.55■□□□□ 0.08
CHMP2A-201ENST00000312547 DBNDD2Q9BQY9 259 aa15.55■□□□□ 0.08
CHMP2A-201ENST00000312547 ZC3H12CQ9C0D7 883 aaKnown RBP15.55■□□□□ 0.08
CHMP2A-201ENST00000312547 PPIP5K2O43314 1243 aa15.54■□□□□ 0.08
CHMP2A-201ENST00000312547 GYG1P46976 350 aa15.54■□□□□ 0.08
CHMP2A-201ENST00000312547 C1QTNF8P60827 252 aa15.54■□□□□ 0.08
CHMP2A-201ENST00000312547 AOC3Q16853 763 aa15.54■□□□□ 0.08
CHMP2A-201ENST00000312547 C16orf71Q8IYS4 520 aaPredicted RBP15.54■□□□□ 0.08
CHMP2A-201ENST00000312547 LNPKQ9C0E8 428 aa15.54■□□□□ 0.08
CHMP2A-201ENST00000312547 RIMBP2O15034 1052 aa15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 IFIT2P09913 472 aaKnown RBP15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 LMNB1P20700 586 aa15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 HIBADHP31937 336 aaKnown RBP15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 BCAMP50895 628 aa15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 CAVIN4Q5BKX8 364 aa15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 CCDC102BQ68D86 513 aa15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 OTUD7AQ8TE49 926 aaPredicted RBP15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 COA1Q9GZY4 146 aa15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 COL4A5P29400 1685 aa15.53■□□□□ 0.08
CHMP2A-201ENST00000312547 ARAP2Q8WZ64 1704 aa15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 IL1R1P14778 569 aa15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 PDE4AP27815 886 aa15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 PHKA1P46020 1223 aa15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 ZNF804AQ7Z570 1209 aa15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 LARGE2Q8N3Y3 721 aa15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 TDRD7Q8NHU6 1098 aaKnown RBP15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 ZNF512BQ96KM6 892 aaPredicted RBP15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 CD209Q9NNX6 404 aa15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.08
CHMP2A-201ENST00000312547 DOK7Q18PE1 504 aa15.51■□□□□ 0.07
CHMP2A-201ENST00000312547 STAP2Q9UGK3 403 aa15.51■□□□□ 0.07
CHMP2A-201ENST00000312547 ARID4AP29374 1257 aaPredicted RBP15.5■□□□□ 0.07
CHMP2A-201ENST00000312547 GORABQ5T7V8 394 aa15.5■□□□□ 0.07
CHMP2A-201ENST00000312547 PODNQ7Z5L7 613 aa15.5■□□□□ 0.07
CHMP2A-201ENST00000312547 BCL11AQ9H165 835 aa15.5■□□□□ 0.07
CHMP2A-201ENST00000312547 DBNDD1Q9H9R9 158 aa15.5■□□□□ 0.07
CHMP2A-201ENST00000312547 YDJCA8MPS7 323 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 SEMA3EO15041 775 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 ECE2O60344 883 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 MX1P20591 662 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 CCDC158Q5M9N0 1113 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 VPS37DQ86XT2 251 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 PLEKHM2Q8IWE5 1019 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 NIM1KQ8IY84 436 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 ECHDC1Q9NTX5 307 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 GNL3LQ9NVN8 582 aaKnown RBP15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 ZNRF3Q9ULT6 936 aa15.49■□□□□ 0.07
CHMP2A-201ENST00000312547 PDS5AQ29RF7 1337 aaKnown RBP15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 TTC41PQ6P2S7 1318 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 COL1A1P02452 1464 aaPredicted RBP15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 FZD9O00144 591 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 UQCRFS1P1P0C7P4 283 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 ATP5JP18859 108 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 PDE1AP54750 535 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 RASGRF1Q13972 1273 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 SCARF1Q14162 830 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 C9orf131Q5VYM1 1079 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 JDP2Q8WYK2 163 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 OSBPL3Q9H4L5 887 aa15.48■□□□□ 0.07
CHMP2A-201ENST00000312547 FAM205AQ6ZU69 1335 aa15.47■□□□□ 0.07
CHMP2A-201ENST00000312547 MCAMP43121 646 aa15.47■□□□□ 0.07
CHMP2A-201ENST00000312547 TTC39AQ5SRH9 613 aa15.47■□□□□ 0.07
CHMP2A-201ENST00000312547 PI4K2BQ8TCG2 481 aa15.47■□□□□ 0.07
CHMP2A-201ENST00000312547 GPATCH3Q96I76 525 aa15.47■□□□□ 0.07
CHMP2A-201ENST00000312547 KCNQ5Q9NR82 932 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms