RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SAMD7Q7Z3H4 446 aa15.07■□□□□ 0
SCFD1-201ENST00000311943 L3MBTL3Q96JM7 780 aaPredicted RBP15.07■□□□□ 0
SCFD1-201ENST00000311943 EYA3Q99504 573 aa15.07■□□□□ 0
SCFD1-201ENST00000311943 ASTN2O75129 1339 aaPredicted RBP15.06■□□□□ 0
SCFD1-201ENST00000311943 G3V3G9 751 aa15.06■□□□□ 0
SCFD1-201ENST00000311943 EPHX2P34913 555 aa15.06■□□□□ 0
SCFD1-201ENST00000311943 METTL24Q5JXM2 366 aa15.06■□□□□ 0
SCFD1-201ENST00000311943 RBM26Q5T8P6 1007 aaKnown RBP15.06■□□□□ 0
SCFD1-201ENST00000311943 DCAF8Q5TAQ9 597 aa15.06■□□□□ 0
SCFD1-201ENST00000311943 TRPM4Q8TD43 1214 aa15.06■□□□□ 0
SCFD1-201ENST00000311943 MED23Q9ULK4 1368 aa15.06■□□□□ 0
SCFD1-201ENST00000311943 EYA2O00167 538 aa15.05■□□□□ 0
SCFD1-201ENST00000311943 TOMM70O94826 608 aa15.05■□□□□ 0
SCFD1-201ENST00000311943 GNAI2P04899 355 aa15.05■□□□□ 0
SCFD1-201ENST00000311943 GNAI3P08754 354 aa15.05■□□□□ 0
SCFD1-201ENST00000311943 ANKRD2Q9GZV1 360 aa15.05■□□□□ 0
SCFD1-201ENST00000311943 LEMD3Q9Y2U8 911 aa15.05■□□□□ 0
SCFD1-201ENST00000311943 MAP1SQ66K74 1059 aaPredicted RBP15.05■□□□□ -0
SCFD1-201ENST00000311943 GPRC5DQ9NZD1 345 aa15.05■□□□□ -0
SCFD1-201ENST00000311943 HACL1Q9UJ83 578 aa15.05■□□□□ -0
SCFD1-201ENST00000311943 PCDHAC2Q9Y5I4 1007 aa15.05■□□□□ -0
SCFD1-201ENST00000311943 ZNF646O15015 1829 aaPredicted RBP15.04■□□□□ -0
SCFD1-201ENST00000311943 PDE8BO95263 885 aa15.04■□□□□ -0
SCFD1-201ENST00000311943 GTF2IP78347 998 aa15.04■□□□□ -0
SCFD1-201ENST00000311943 GRIK5Q16478 980 aa15.04■□□□□ -0
SCFD1-201ENST00000311943 FAM84BQ96KN1 310 aaPredicted RBP15.04■□□□□ -0
SCFD1-201ENST00000311943 VPS33BQ9H267 617 aa15.04■□□□□ -0
SCFD1-201ENST00000311943 CD209Q9NNX6 404 aa15.04■□□□□ -0
SCFD1-201ENST00000311943 BCAMP50895 628 aa15.04■□□□□ -0
SCFD1-201ENST00000311943 MVPQ14764 893 aaKnown RBP15.04■□□□□ -0
SCFD1-201ENST00000311943 TBC1D10BQ4KMP7 808 aaPredicted RBP15.04■□□□□ -0
SCFD1-201ENST00000311943 MICALL2Q8IY33 904 aa15.04■□□□□ -0
SCFD1-201ENST00000311943 CERS5Q8N5B7 392 aa15.04■□□□□ -0
SCFD1-201ENST00000311943 CNOT7Q9UIV1 285 aaKnown RBP15.04■□□□□ -0
SCFD1-201ENST00000311943 ADORA1P30542 326 aa15.03■□□□□ -0
SCFD1-201ENST00000311943 TIMM10P62072 90 aa15.03■□□□□ -0
SCFD1-201ENST00000311943 SIRT2Q8IXJ6 389 aa15.03■□□□□ -0
SCFD1-201ENST00000311943 C16orf71Q8IYS4 520 aaPredicted RBP15.03■□□□□ -0
SCFD1-201ENST00000311943 BCL11AQ9H165 835 aa15.03■□□□□ -0
SCFD1-201ENST00000311943 VIL1P09327 827 aaKnown RBP15.02■□□□□ -0
SCFD1-201ENST00000311943 TFCP2Q12800 502 aa15.02■□□□□ -0
SCFD1-201ENST00000311943 DACT2Q5SW24 774 aa15.02■□□□□ -0
SCFD1-201ENST00000311943 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
SCFD1-201ENST00000311943 FGFR2P21802 821 aa15.02□□□□□ -0.01
SCFD1-201ENST00000311943 MTX1Q13505 466 aa15.02□□□□□ -0.01
SCFD1-201ENST00000311943 COPRSQ9NQ92 184 aa15.02□□□□□ -0.01
SCFD1-201ENST00000311943 AOX1Q06278 1338 aa15.01□□□□□ -0.01
SCFD1-201ENST00000311943 F8W031 263 aaPredicted RBP15.01□□□□□ -0.01
SCFD1-201ENST00000311943 SASH1O94885 1247 aa15.01□□□□□ -0.01
SCFD1-201ENST00000311943 CEP85Q6P2H3 762 aa15.01□□□□□ -0.01
SCFD1-201ENST00000311943 COA1Q9GZY4 146 aa15.01□□□□□ -0.01
SCFD1-201ENST00000311943 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
SCFD1-201ENST00000311943 SCN4AP35499 1836 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 TRAF5O00463 557 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 ATP8B2P98198 1209 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 TNIP1Q15025 636 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 TTLL5Q6EMB2 1281 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 RSBN1LQ6PCB5 846 aaPredicted RBP15□□□□□ -0.01
SCFD1-201ENST00000311943 KIAA0825Q8IV33 1275 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 GMLQ99445 158 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 ZBTB40Q9NUA8 1239 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 USP17L3A6NCW0 530 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 USP17L4A6NCW7 530 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 POLA2Q14181 598 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 USP17L1Q7RTZ2 530 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 PODNQ7Z5L7 613 aa15□□□□□ -0.01
SCFD1-201ENST00000311943 ADAMTSL1Q8N6G6 1762 aa14.99□□□□□ -0.01
SCFD1-201ENST00000311943 IQCA1LA6NCM1 817 aa14.99□□□□□ -0.01
SCFD1-201ENST00000311943 LMOD1P29536 600 aaPredicted RBP14.99□□□□□ -0.01
SCFD1-201ENST00000311943 RRP1P56182 461 aaKnown RBP14.99□□□□□ -0.01
SCFD1-201ENST00000311943 UBE4AQ14139 1066 aa14.99□□□□□ -0.01
SCFD1-201ENST00000311943 EXOC6BQ9Y2D4 811 aa14.99□□□□□ -0.01
SCFD1-201ENST00000311943 APBB1O00213 710 aa14.99□□□□□ -0.01
SCFD1-201ENST00000311943 RBM46Q8TBY0 533 aaKnown RBP14.99□□□□□ -0.01
SCFD1-201ENST00000311943 SSH3Q8TE77 659 aa14.99□□□□□ -0.01
SCFD1-201ENST00000311943 COL1A1P02452 1464 aaPredicted RBP14.98□□□□□ -0.01
SCFD1-201ENST00000311943 SURF6O75683 361 aaKnown RBP14.98□□□□□ -0.01
SCFD1-201ENST00000311943 IL1R1P14778 569 aa14.98□□□□□ -0.01
SCFD1-201ENST00000311943 HIBADHP31937 336 aaKnown RBP14.98□□□□□ -0.01
SCFD1-201ENST00000311943 IRX6P78412 446 aaPredicted RBP14.98□□□□□ -0.01
SCFD1-201ENST00000311943 CHAF1AQ13111 956 aaPredicted RBP14.98□□□□□ -0.01
SCFD1-201ENST00000311943 C15orf52Q6ZUT6 534 aaKnown RBP14.98□□□□□ -0.01
SCFD1-201ENST00000311943 PSME4Q14997 1843 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 CIAO1O76071 339 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 ITGBL1O95965 494 aaPredicted RBP14.97□□□□□ -0.01
SCFD1-201ENST00000311943 PHKA1P46020 1223 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
SCFD1-201ENST00000311943 ATP2B3Q16720 1220 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 CHADLQ6NUI6 762 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 FBXO33Q7Z6M2 555 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 TDRD7Q8NHU6 1098 aaKnown RBP14.97□□□□□ -0.01
SCFD1-201ENST00000311943 CRBNQ96SW2 442 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 GLIS2Q9BZE0 524 aaPredicted RBP14.97□□□□□ -0.01
SCFD1-201ENST00000311943 CEP126Q9P2H0 1117 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 NBPF9Q3BBW0 867 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 PI16Q6UXB8 463 aa14.97□□□□□ -0.01
SCFD1-201ENST00000311943 ADARB2Q9NS39 739 aaKnown RBP14.97□□□□□ -0.01
SCFD1-201ENST00000311943 TLR7Q9NYK1 1049 aaKnown RBP14.97□□□□□ -0.01
SCFD1-201ENST00000311943 SUPT16HQ9Y5B9 1047 aaKnown RBP14.97□□□□□ -0.01
SCFD1-201ENST00000311943 A0A1B0GUL7 405 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms