RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 NBPF9Q3BBW0 867 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 ADCK5Q3MIX3 580 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 TTLL5Q6EMB2 1281 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 RUFY3Q7L099 469 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 CCDC191Q8NCU4 936 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 NSFL1CQ9UNZ2 370 aaKnown RBP11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 MYH7P12883 1935 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 ERVV-2B6SEH9 535 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 NPHP1O15259 732 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 BRD1O95696 1058 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 NCBP1Q09161 790 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 HSP90AB4PQ58FF6 505 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 ZCRB1Q8TBF4 217 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 GPT2Q8TD30 523 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 PIBF1Q8WXW3 757 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 UPF3BQ9BZI7 483 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 LTBP4Q8N2S1 1624 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 A0A1B0GUL6 1792 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 COL4A1P02462 1669 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 H0YHG0 523 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 CSB-PGBD3P0DP91 1061 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 RBM5P52756 815 aaKnown RBP eCLIP11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 SARNPP82979 210 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 ATG9AQ7Z3C6 839 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 RIC3Q7Z5B4 369 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 PLBD2Q8NHP8 589 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 FAM227BQ96M60 508 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 DBNLQ9UJU6 430 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 ST18O60284 1047 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 CWC27Q6UX04 472 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 AACSQ86V21 672 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 MNS1Q8NEH6 495 aa11.19□□□□□ -0.62
RBFOX1-201ENST00000311745 A0A0D9SFI3 127 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 POLR3GO15318 223 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 DDX58O95786 925 aaKnown RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 CPA1P15085 419 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 CABP4P57796 275 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 TTC31Q49AM3 519 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 KIF18AQ8NI77 898 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 CCDC8Q9H0W5 538 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 MORC2Q9Y6X9 1032 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 ZNF609O15014 1411 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 SYCE3A1L190 88 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 ATP5J2-PTCD1G3V325 749 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 PTCD1O75127 700 aaKnown RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 A1BGP04217 495 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 HMGB1P09429 215 aaKnown RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 KLHL40Q2TBA0 621 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 TTC19Q6DKK2 380 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 ARMCX6Q7L4S7 300 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 CNTROBQ8N137 903 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 V9GYY5 206 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-201ENST00000311745 MAP2K2P36507 400 aa11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 NBPF5PQ86XG9 351 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 GTF3C6Q969F1 213 aa11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 EDC3Q96F86 508 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 INTS4Q96HW7 963 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 ERC1Q8IUD2 1116 aa11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 SIL1Q9H173 461 aa11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 LAMB2P55268 1798 aa11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 IL2RBP14784 551 aa11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 SETQ01105 290 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 ZNF589Q86UQ0 364 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 CLASRPQ8N2M8 674 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 ANKRD20A12PQ8NF67 263 aa11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 PRDM11Q9NQV5 511 aa11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 RBM28Q9NW13 759 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-201ENST00000311745 A0A1B0GUL7 405 aa11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 KIF1CO43896 1103 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 CALRP27797 417 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 CYP2C19P33261 490 aa11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 TFCP2Q12800 502 aa11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 NMIQ13287 307 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 UBE3BQ7Z3V4 1068 aa11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 MAP4K1Q92918 833 aa11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 EVI5LQ96CN4 794 aa11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 MYH14Q7Z406 1995 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 CCDC189A1A4V9 331 aa11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 AK2P54819 239 aa11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 NDUFB9Q9Y6M9 179 aa11.16□□□□□ -0.62
RBFOX1-201ENST00000311745 TNNI3KQ59H18 835 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 TOM1L2Q6ZVM7 507 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 BORCS6Q96GS4 357 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 FPGT-TNNI3KV9GXZ4 949 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 BCL9O00512 1426 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 BCORQ6W2J9 1755 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 NUCB2P80303 420 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 TTC5Q8N0Z6 440 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 ZSWIM6Q9HCJ5 1215 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 ZNF446Q9NWS9 450 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 CCDC171Q6TFL3 1326 aa11.15□□□□□ -0.62
RBFOX1-201ENST00000311745 ATP2B1P20020 1258 aa11.15□□□□□ -0.63
RBFOX1-201ENST00000311745 ISCA1Q9BUE6 129 aa11.15□□□□□ -0.63
RBFOX1-201ENST00000311745 SLC24A3Q9HC58 644 aa11.15□□□□□ -0.63
RBFOX1-201ENST00000311745 DOCK2Q92608 1830 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms