RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SNRKQ9NRH2 765 aa21.18■□□□□ 0.98
KRT28-201ENST00000306658 MCCP23508 829 aa21.17■□□□□ 0.98
KRT28-201ENST00000306658 MCAMP43121 646 aa21.17■□□□□ 0.98
KRT28-201ENST00000306658 SCARF1Q14162 830 aa21.17■□□□□ 0.98
KRT28-201ENST00000306658 TTF1Q15361 905 aaPredicted RBP21.17■□□□□ 0.98
KRT28-201ENST00000306658 CAVIN4Q5BKX8 364 aa21.17■□□□□ 0.98
KRT28-201ENST00000306658 A0A1B0GUL6 1792 aa21.17■□□□□ 0.98
KRT28-201ENST00000306658 ZAP70P43403 619 aa21.16■□□□□ 0.98
KRT28-201ENST00000306658 IL25Q9H293 177 aa21.16■□□□□ 0.98
KRT28-201ENST00000306658 GNL3LQ9NVN8 582 aaKnown RBP21.16■□□□□ 0.98
KRT28-201ENST00000306658 BCAMP50895 628 aa21.15■□□□□ 0.98
KRT28-201ENST00000306658 TMC4Q7Z404 712 aa21.15■□□□□ 0.98
KRT28-201ENST00000306658 SLC16A10Q8TF71 515 aa21.15■□□□□ 0.98
KRT28-201ENST00000306658 FAM227BQ96M60 508 aa21.15■□□□□ 0.98
KRT28-201ENST00000306658 NPR1P16066 1061 aa21.15■□□□□ 0.98
KRT28-201ENST00000306658 ANTXR1Q9H6X2 564 aa21.15■□□□□ 0.98
KRT28-201ENST00000306658 ANKIB1Q9P2G1 1089 aa21.15■□□□□ 0.98
KRT28-201ENST00000306658 AKAP11Q9UKA4 1901 aa21.14■□□□□ 0.98
KRT28-201ENST00000306658 ANKRD31Q8N7Z5 1873 aa21.14■□□□□ 0.97
KRT28-201ENST00000306658 ZFYP08048 801 aaPredicted RBP21.14■□□□□ 0.97
KRT28-201ENST00000306658 SRGNP10124 158 aa21.14■□□□□ 0.97
KRT28-201ENST00000306658 SPATA5Q8NB90 893 aa21.14■□□□□ 0.97
KRT28-201ENST00000306658 LEMD3Q9Y2U8 911 aa21.14■□□□□ 0.97
KRT28-201ENST00000306658 ZNF804BA4D1E1 1349 aa21.13■□□□□ 0.97
KRT28-201ENST00000306658 XDHP47989 1333 aa21.13■□□□□ 0.97
KRT28-201ENST00000306658 A0A0D9SFI3 127 aa21.13■□□□□ 0.97
KRT28-201ENST00000306658 ALDH1B1P30837 517 aa21.13■□□□□ 0.97
KRT28-201ENST00000306658 PI16Q6UXB8 463 aa21.13■□□□□ 0.97
KRT28-201ENST00000306658 VPS37DQ86XT2 251 aa21.13■□□□□ 0.97
KRT28-201ENST00000306658 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.13■□□□□ 0.97
KRT28-201ENST00000306658 HMG20BQ9P0W2 317 aa21.13■□□□□ 0.97
KRT28-201ENST00000306658 DAXXQ9UER7 740 aaPredicted RBP21.13■□□□□ 0.97
KRT28-201ENST00000306658 RNF113AO15541 343 aaKnown RBP21.12■□□□□ 0.97
KRT28-201ENST00000306658 RASGRF1Q13972 1273 aa21.12■□□□□ 0.97
KRT28-201ENST00000306658 BECN1Q14457 450 aa21.12■□□□□ 0.97
KRT28-201ENST00000306658 LSG1Q9H089 658 aaKnown RBP21.12■□□□□ 0.97
KRT28-201ENST00000306658 HELLSQ9NRZ9 838 aa21.12■□□□□ 0.97
KRT28-201ENST00000306658 CYP2E1P05181 493 aaPredicted RBP21.12■□□□□ 0.97
KRT28-201ENST00000306658 MCMDC2Q4G0Z9 681 aa21.12■□□□□ 0.97
KRT28-201ENST00000306658 ZSCAN25Q6NSZ9 544 aa21.12■□□□□ 0.97
KRT28-201ENST00000306658 MASTLQ96GX5 879 aa21.12■□□□□ 0.97
KRT28-201ENST00000306658 KIF2CQ99661 725 aa21.12■□□□□ 0.97
KRT28-201ENST00000306658 GYG1P46976 350 aa21.11■□□□□ 0.97
KRT28-201ENST00000306658 FAM84BQ96KN1 310 aaPredicted RBP21.11■□□□□ 0.97
KRT28-201ENST00000306658 WTIPA6NIX2 430 aaPredicted RBP21.1■□□□□ 0.97
KRT28-201ENST00000306658 ANAPC15P60006 121 aa21.1■□□□□ 0.97
KRT28-201ENST00000306658 MED23Q9ULK4 1368 aa21.1■□□□□ 0.97
KRT28-201ENST00000306658 CCDC171Q6TFL3 1326 aa21.1■□□□□ 0.97
KRT28-201ENST00000306658 PPEF1O14829 653 aaPredicted RBP21.09■□□□□ 0.97
KRT28-201ENST00000306658 SEMA3EO15041 775 aa21.09■□□□□ 0.97
KRT28-201ENST00000306658 ZMYM1Q5SVZ6 1142 aa21.09■□□□□ 0.97
KRT28-201ENST00000306658 FBXO33Q7Z6M2 555 aa21.09■□□□□ 0.97
KRT28-201ENST00000306658 SP8Q8IXZ3 490 aa21.09■□□□□ 0.97
KRT28-201ENST00000306658 PDGFDQ9GZP0 370 aaPredicted RBP21.09■□□□□ 0.97
KRT28-201ENST00000306658 H0YIN7 160 aa21.09■□□□□ 0.97
KRT28-201ENST00000306658 ATP2B4P23634 1241 aa21.09■□□□□ 0.97
KRT28-201ENST00000306658 HIBADHP31937 336 aaKnown RBP21.09■□□□□ 0.97
KRT28-201ENST00000306658 HSPA4P34932 840 aa21.09■□□□□ 0.97
KRT28-201ENST00000306658 RABEP1Q15276 862 aa21.09■□□□□ 0.97
KRT28-201ENST00000306658 NSFL1CQ9UNZ2 370 aaKnown RBP21.09■□□□□ 0.97
KRT28-201ENST00000306658 GPSM2P81274 684 aa21.08■□□□□ 0.96
KRT28-201ENST00000306658 C2CD5Q86YS7 1000 aa21.08■□□□□ 0.96
KRT28-201ENST00000306658 TMX4Q9H1E5 349 aaPredicted RBP21.08■□□□□ 0.96
KRT28-201ENST00000306658 PODXL2Q9NZ53 605 aa21.08■□□□□ 0.96
KRT28-201ENST00000306658 DENND2AQ9ULE3 1009 aa21.08■□□□□ 0.96
KRT28-201ENST00000306658 IDH1O75874 414 aaKnown RBP21.07■□□□□ 0.96
KRT28-201ENST00000306658 PTH1RQ03431 593 aa21.07■□□□□ 0.96
KRT28-201ENST00000306658 ZNF589Q86UQ0 364 aaPredicted RBP21.07■□□□□ 0.96
KRT28-201ENST00000306658 MAP4K1Q92918 833 aa21.07■□□□□ 0.96
KRT28-201ENST00000306658 PIH1D3Q9NQM4 214 aaKnown RBP21.07■□□□□ 0.96
KRT28-201ENST00000306658 GGA1Q9UJY5 639 aa21.07■□□□□ 0.96
KRT28-201ENST00000306658 ATP6V0A2Q9Y487 856 aa21.07■□□□□ 0.96
KRT28-201ENST00000306658 FRAT2O75474 233 aaPredicted RBP21.06■□□□□ 0.96
KRT28-201ENST00000306658 MAP3K12Q12852 859 aa21.06■□□□□ 0.96
KRT28-201ENST00000306658 WASHC4Q2M389 1173 aa21.06■□□□□ 0.96
KRT28-201ENST00000306658 SLC9C2Q5TAH2 1124 aa21.06■□□□□ 0.96
KRT28-201ENST00000306658 STYK1Q6J9G0 422 aa21.06■□□□□ 0.96
KRT28-201ENST00000306658 C15orf52Q6ZUT6 534 aaKnown RBP21.06■□□□□ 0.96
KRT28-201ENST00000306658 SEC62Q99442 399 aaKnown RBP21.06■□□□□ 0.96
KRT28-201ENST00000306658 ZBTB22O15209 634 aa21.05■□□□□ 0.96
KRT28-201ENST00000306658 CHGBP05060 677 aa21.05■□□□□ 0.96
KRT28-201ENST00000306658 KLRK1P26718 216 aa21.05■□□□□ 0.96
KRT28-201ENST00000306658 APPBP2Q92624 585 aa21.05■□□□□ 0.96
KRT28-201ENST00000306658 ZNF622Q969S3 477 aaKnown RBP eCLIP21.05■□□□□ 0.96
KRT28-201ENST00000306658 IQSEC3Q9UPP2 1182 aaPredicted RBP21.05■□□□□ 0.96
KRT28-201ENST00000306658 MYH7P12883 1935 aa21.05■□□□□ 0.96
KRT28-201ENST00000306658 UFL1O94874 794 aa21.05■□□□□ 0.96
KRT28-201ENST00000306658 ADD2P35612 726 aa21.05■□□□□ 0.96
KRT28-201ENST00000306658 UBE3CQ15386 1083 aa21.05■□□□□ 0.96
KRT28-201ENST00000306658 IL17RAQ96F46 866 aa21.05■□□□□ 0.96
KRT28-201ENST00000306658 PDS5AQ29RF7 1337 aaKnown RBP21.04■□□□□ 0.96
KRT28-201ENST00000306658 IRS2Q9Y4H2 1338 aa21.04■□□□□ 0.96
KRT28-201ENST00000306658 ZNF804AQ7Z570 1209 aa21.04■□□□□ 0.96
KRT28-201ENST00000306658 UPF1Q92900 1129 aaKnown RBP eCLIP21.04■□□□□ 0.96
KRT28-201ENST00000306658 SNX21Q969T3 373 aa21.04■□□□□ 0.96
KRT28-201ENST00000306658 IL27Q8NEV9 243 aa21.03■□□□□ 0.96
KRT28-201ENST00000306658 OSBP2Q969R2 916 aa21.03■□□□□ 0.96
KRT28-201ENST00000306658 LRP2BPQ9P2M1 347 aa21.03■□□□□ 0.96
KRT28-201ENST00000306658 RBM8AQ9Y5S9 174 aaKnown RBP21.03■□□□□ 0.96
KRT28-201ENST00000306658 COL11A2P13942 1736 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms