RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 UBXN1Q04323 297 aa15.11■□□□□ 0.01
TRIM56-201ENST00000306085 KARSQ15046 597 aaKnown RBP15.11■□□□□ 0.01
TRIM56-201ENST00000306085 RNF10Q8N5U6 811 aaKnown RBP15.11■□□□□ 0.01
TRIM56-201ENST00000306085 I3L4J1 428 aa15.11■□□□□ 0.01
TRIM56-201ENST00000306085 SEL1L2Q5TEA6 688 aa15.11■□□□□ 0.01
TRIM56-201ENST00000306085 OPHN1O60890 802 aa15.11■□□□□ 0.01
TRIM56-201ENST00000306085 TMEM132EQ6IEE7 984 aa15.11■□□□□ 0.01
TRIM56-201ENST00000306085 MSANTD4Q8NCY6 345 aa15.11■□□□□ 0.01
TRIM56-201ENST00000306085 CALCOCO2Q13137 446 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 KIF1BPQ96EK5 621 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 ZNF652Q9Y2D9 606 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 SLC5A1P13866 664 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 KAT14Q9H8E8 782 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 GLRX3O76003 335 aaKnown RBP15.1■□□□□ 0.01
TRIM56-201ENST00000306085 INPP5BP32019 993 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 PSPC1Q8WXF1 523 aaKnown RBP15.1■□□□□ 0.01
TRIM56-201ENST00000306085 PNISRQ8TF01 805 aaKnown RBP15.1■□□□□ 0.01
TRIM56-201ENST00000306085 METAP2P50579 478 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRIM56-201ENST00000306085 SLF2Q8IX21 1173 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 TSGA10Q9BZW7 698 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 CAVIN2O95810 425 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 ATP6V1E1P36543 226 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 NOLC1Q14978 699 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRIM56-201ENST00000306085 RPGRQ92834 1020 aaKnown RBP15.1■□□□□ 0.01
TRIM56-201ENST00000306085 RABEP2Q9H5N1 569 aa15.1■□□□□ 0.01
TRIM56-201ENST00000306085 ZNF219Q9P2Y4 722 aaPredicted RBP15.09■□□□□ 0.01
TRIM56-201ENST00000306085 MUM1Q2TAK8 710 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 GCKP35557 465 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 ASIC1P78348 528 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 NBPF8Q3BBV2 869 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 KRT83P78385 493 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 MCM10Q7L590 875 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 ARHGAP24Q8N264 748 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 STK38LQ9Y2H1 464 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 TNNC1P63316 161 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 NEK11Q8NG66 645 aa15.09■□□□□ 0.01
TRIM56-201ENST00000306085 SF3A3Q12874 501 aaKnown RBP eCLIP15.08■□□□□ 0.01
TRIM56-201ENST00000306085 ZNF569Q5MCW4 686 aa15.08■□□□□ 0.01
TRIM56-201ENST00000306085 USP16Q9Y5T5 823 aa15.08■□□□□ 0.01
TRIM56-201ENST00000306085 BIRC2Q13490 618 aa15.08■□□□□ 0
TRIM56-201ENST00000306085 ARFGAP2Q8N6H7 521 aa15.08■□□□□ 0
TRIM56-201ENST00000306085 AOPEPQ8N6M6 819 aa15.08■□□□□ 0
TRIM56-201ENST00000306085 NDUFAB1O14561 156 aa15.08■□□□□ 0
TRIM56-201ENST00000306085 POTEDQ86YR6 584 aa15.08■□□□□ 0
TRIM56-201ENST00000306085 CNGA1P29973 690 aa15.08■□□□□ 0
TRIM56-201ENST00000306085 PNMA8AQ86V59 439 aaPredicted RBP15.08■□□□□ 0
TRIM56-201ENST00000306085 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.08■□□□□ 0
TRIM56-201ENST00000306085 NCBP1Q09161 790 aaKnown RBP15.08■□□□□ 0
TRIM56-201ENST00000306085 HMGB1P1B2RPK0 211 aaPredicted RBP15.07■□□□□ 0
TRIM56-201ENST00000306085 STARD3NLO95772 234 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 CALM1P0DP23 149 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 CALM2P0DP24 149 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 CALM3P0DP25 149 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 UTP11Q9Y3A2 253 aaKnown RBP15.07■□□□□ 0
TRIM56-201ENST00000306085 HAND2P61296 217 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 KRT5P13647 590 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 IARSP41252 1262 aaKnown RBP15.07■□□□□ 0
TRIM56-201ENST00000306085 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 TSPY2A6NKD2 308 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 IFIT5Q13325 482 aaKnown RBP15.07■□□□□ 0
TRIM56-201ENST00000306085 MFSD6Q6ZSS7 791 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 CCDC42Q96M95 316 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 TACO1Q9BSH4 297 aaKnown RBP15.07■□□□□ 0
TRIM56-201ENST00000306085 PFDN1O60925 122 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 PDE4BQ07343 736 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 PPP2R1AP30153 589 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 SMARCC2Q8TAQ2 1214 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 PLS1Q14651 629 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 PDZD8Q8NEN9 1154 aa15.07■□□□□ 0
TRIM56-201ENST00000306085 PHEXP78562 749 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 LRCH2Q5VUJ6 765 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 FAF1Q9UNN5 650 aaPredicted RBP15.06■□□□□ 0
TRIM56-201ENST00000306085 SESN3P58005 492 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 HEATR3Q7Z4Q2 680 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 SPDL1Q96EA4 605 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 TRIM4Q9C037 500 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 FAM204AQ9H8W3 233 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 MICAL1Q8TDZ2 1067 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 GRM1Q13255 1194 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 RILPL1Q5EBL4 403 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 TRIM35Q9UPQ4 493 aa15.06■□□□□ 0
TRIM56-201ENST00000306085 AMOTQ4VCS5 1084 aa15.05■□□□□ 0
TRIM56-201ENST00000306085 TUBB4BP68371 445 aa15.05■□□□□ 0
TRIM56-201ENST00000306085 PSMA7O14818 248 aa15.05■□□□□ 0
TRIM56-201ENST00000306085 ORC3Q9UBD5 711 aaPredicted RBP15.05■□□□□ 0
TRIM56-201ENST00000306085 KRT9P35527 623 aa15.05■□□□□ 0
TRIM56-201ENST00000306085 CCDC26Q8TAB7 109 aa15.05■□□□□ 0
TRIM56-201ENST00000306085 SYF2O95926 243 aaKnown RBP15.05■□□□□ -0
TRIM56-201ENST00000306085 MAP2K2P36507 400 aa15.05■□□□□ -0
TRIM56-201ENST00000306085 PEX19P40855 299 aa15.05■□□□□ -0
TRIM56-201ENST00000306085 SRGAP1Q7Z6B7 1085 aa15.05■□□□□ -0
TRIM56-201ENST00000306085 STK10O94804 968 aaKnown RBP15.05■□□□□ -0
TRIM56-201ENST00000306085 UTP14CQ5TAP6 766 aaKnown RBP15.05■□□□□ -0
TRIM56-201ENST00000306085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.05■□□□□ -0
TRIM56-201ENST00000306085 TAOK1Q7L7X3 1001 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 RILPQ96NA2 401 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 UVSSAQ2YD98 709 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 LEO1Q8WVC0 666 aaPredicted RBP15.04■□□□□ -0
TRIM56-201ENST00000306085 RNF34Q969K3 372 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 RIOK3O14730 519 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms