RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 VPS37CA5D8V6 355 aaPredicted RBP8.55□□□□□ -1.04
RGPD3-201ENST00000304514 KDM4AO75164 1064 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 ADORA1P30542 326 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 ZBTB38Q8NAP3 1195 aaPredicted RBP8.55□□□□□ -1.04
RGPD3-201ENST00000304514 LEO1Q8WVC0 666 aaPredicted RBP8.55□□□□□ -1.04
RGPD3-201ENST00000304514 PGBD1Q96JS3 809 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 ZNF512BQ96KM6 892 aaPredicted RBP8.55□□□□□ -1.04
RGPD3-201ENST00000304514 MAP3K15Q6ZN16 1313 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 MYH14Q7Z406 1995 aaKnown RBP8.55□□□□□ -1.04
RGPD3-201ENST00000304514 MSNP26038 577 aaKnown RBP8.55□□□□□ -1.04
RGPD3-201ENST00000304514 TERF1P54274 439 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 TIMM10P62072 90 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 SLC4A9Q96Q91 983 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 LIG1P18858 919 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 GIMAP6Q6P9H5 292 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 XAGE2Q96GT9 111 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 NBPF3Q9H094 633 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 CACNA1SQ13698 1873 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 PDCP20941 246 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 DHX32Q7L7V1 743 aaKnown RBP8.55□□□□□ -1.04
RGPD3-201ENST00000304514 TMOD3Q9NYL9 352 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 OSBP2Q969R2 916 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 NAP1L5Q96NT1 182 aaPredicted RBP8.54□□□□□ -1.04
RGPD3-201ENST00000304514 CLSTN2Q9H4D0 955 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 MYH2Q9UKX2 1941 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 KRT85P78386 507 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 ASAP1Q9ULH1 1129 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 HCLS1P14317 486 aaPredicted RBP8.54□□□□□ -1.04
RGPD3-201ENST00000304514 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
RGPD3-201ENST00000304514 ADCY5O95622 1261 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 TPM2P07951 284 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 CYP19A1P11511 503 aaPredicted RBP8.54□□□□□ -1.04
RGPD3-201ENST00000304514 SCARF1Q14162 830 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 CHMP3Q9Y3E7 222 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 RIPOR2Q9Y4F9 1068 aa8.54□□□□□ -1.04
RGPD3-201ENST00000304514 KDM4FA0A1W2PPD8 638 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 IFIT1P09914 478 aaKnown RBP8.53□□□□□ -1.04
RGPD3-201ENST00000304514 APOBRQ0VD83 1088 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 HLFQ16534 295 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 NAA16Q6N069 864 aaPredicted RBP8.53□□□□□ -1.04
RGPD3-201ENST00000304514 FAM173BQ6P4H8 233 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 CARMIL3Q8ND23 1372 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 LTBP4Q8N2S1 1624 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 WDR19Q8NEZ3 1342 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 MB21D2Q8IYB1 491 aaPredicted RBP8.53□□□□□ -1.04
RGPD3-201ENST00000304514 ZNF274Q96GC6 653 aaPredicted RBP8.53□□□□□ -1.04
RGPD3-201ENST00000304514 KCNF1Q9H3M0 494 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 NHSQ6T4R5 1651 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 PDIA3P30101 505 aaKnown RBP8.53□□□□□ -1.04
RGPD3-201ENST00000304514 NEUROD6Q96NK8 337 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 TEX13AQ9BXU3 409 aaPredicted RBP8.53□□□□□ -1.04
RGPD3-201ENST00000304514 TAF1LQ8IZX4 1826 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 KIF6Q6ZMV9 814 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 GOLPH3LQ9H4A5 285 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 USP25Q9UHP3 1055 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 LY75O60449 1722 aa8.53□□□□□ -1.04
RGPD3-201ENST00000304514 TCRBV5S4A2TA0A5A2 114 aa8.52□□□□□ -1.04
RGPD3-201ENST00000304514 BRF1Q92994 677 aa8.52□□□□□ -1.04
RGPD3-201ENST00000304514 SPATA32Q96LK8 384 aa8.52□□□□□ -1.04
RGPD3-201ENST00000304514 LRRC2Q9BYS8 371 aa8.52□□□□□ -1.04
RGPD3-201ENST00000304514 SCAND2PQ9GZW5 306 aaPredicted RBP8.52□□□□□ -1.04
RGPD3-201ENST00000304514 ZSCAN16Q9H4T2 348 aaPredicted RBP8.52□□□□□ -1.04
RGPD3-201ENST00000304514 HPS5Q9UPZ3 1129 aa8.52□□□□□ -1.04
RGPD3-201ENST00000304514 UBN2Q6ZU65 1347 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 TAF1P21675 1872 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 FDPSP14324 419 aaKnown RBP8.52□□□□□ -1.05
RGPD3-201ENST00000304514 TTC39AQ5SRH9 613 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 NLRP10Q86W26 655 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 NKX2-3Q8TAU0 364 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 ARID4AP29374 1257 aaPredicted RBP8.52□□□□□ -1.05
RGPD3-201ENST00000304514 CTSWP56202 376 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 ANTXR2P58335 489 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 SNW1Q13573 536 aaKnown RBP8.52□□□□□ -1.05
RGPD3-201ENST00000304514 FERMT3Q86UX7 667 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 PUS7LQ9H0K6 701 aaKnown RBP8.52□□□□□ -1.05
RGPD3-201ENST00000304514 NID2Q14112 1375 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 DUOX1Q9NRD9 1551 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 PTPDC1A2A3K4 754 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 MCAMP43121 646 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 DNAJC10Q8IXB1 793 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 STRN4Q9NRL3 753 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 SPTLC3Q9NUV7 552 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 CCDC9Q9Y3X0 531 aaKnown RBP8.52□□□□□ -1.05
RGPD3-201ENST00000304514 NR1I2O75469 434 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 HSP90B1P14625 803 aaKnown RBP8.52□□□□□ -1.05
RGPD3-201ENST00000304514 SYNE4Q8N205 404 aa8.52□□□□□ -1.05
RGPD3-201ENST00000304514 TTLL5Q6EMB2 1281 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 GIGYF2Q6Y7W6 1299 aaKnown RBP8.51□□□□□ -1.05
RGPD3-201ENST00000304514 PLA2G4DQ86XP0 818 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 RGS22Q8NE09 1264 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 THSD7AQ9UPZ6 1657 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 ZMYM6O95789 1325 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 TTLL11Q8NHH1 800 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 NUP62CLQ9H1M0 184 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 GREM2Q9H772 168 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 ZAP70P43403 619 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 TYRO3Q06418 890 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 CCDC57Q2TAC2 916 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 DDX11Q96FC9 970 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms