RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 MTMR6Q9Y217 621 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 CNPY2Q9Y2B0 182 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 TAF5LO75529 589 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 GYS1P13807 737 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 UVSSAQ2YD98 709 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 FOXD4L6Q3SYB3 417 aaPredicted RBP16.88■□□□□ 0.29
RAB40A-201ENST00000304236 FOXD4L3Q6VB84 417 aaPredicted RBP16.88■□□□□ 0.29
RAB40A-201ENST00000304236 GPR108Q9NPR9 543 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 C1QTNF8P60827 252 aa16.87■□□□□ 0.29
RAB40A-201ENST00000304236 HAUS7Q99871 368 aa16.87■□□□□ 0.29
RAB40A-201ENST00000304236 COL5A3P25940 1745 aaPredicted RBP16.87■□□□□ 0.29
RAB40A-201ENST00000304236 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
RAB40A-201ENST00000304236 CWC25Q9NXE8 425 aaPredicted RBP16.86■□□□□ 0.29
RAB40A-201ENST00000304236 WWC3Q9ULE0 1092 aa16.86■□□□□ 0.29
RAB40A-201ENST00000304236 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
RAB40A-201ENST00000304236 U3KPZ7 1027 aaPredicted RBP16.86■□□□□ 0.29
RAB40A-201ENST00000304236 UTRNP46939 3433 aa16.86■□□□□ 0.29
RAB40A-201ENST00000304236 UBR2Q8IWV8 1755 aa16.86■□□□□ 0.29
RAB40A-201ENST00000304236 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
RAB40A-201ENST00000304236 TGFB2P61812 414 aa16.86■□□□□ 0.29
RAB40A-201ENST00000304236 CCDC87Q9NVE4 849 aa16.86■□□□□ 0.29
RAB40A-201ENST00000304236 PARP3Q9Y6F1 533 aa16.86■□□□□ 0.29
RAB40A-201ENST00000304236 MCM5P33992 734 aa16.85■□□□□ 0.29
RAB40A-201ENST00000304236 ST3GAL1Q11201 340 aa16.85■□□□□ 0.29
RAB40A-201ENST00000304236 LMBR1LQ6UX01 489 aa16.85■□□□□ 0.29
RAB40A-201ENST00000304236 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
RAB40A-201ENST00000304236 NAP1L5Q96NT1 182 aaPredicted RBP16.85■□□□□ 0.29
RAB40A-201ENST00000304236 NOL7Q9UMY1 257 aaKnown RBP16.85■□□□□ 0.29
RAB40A-201ENST00000304236 NBPF26B4DH59 902 aa16.84■□□□□ 0.29
RAB40A-201ENST00000304236 FOXO4P98177 505 aa16.84■□□□□ 0.29
RAB40A-201ENST00000304236 MCMDC2Q4G0Z9 681 aa16.84■□□□□ 0.29
RAB40A-201ENST00000304236 LARP1BQ659C4 914 aaKnown RBP16.84■□□□□ 0.29
RAB40A-201ENST00000304236 NBPF10Q6P3W6 841 aaKnown RBP16.84■□□□□ 0.29
RAB40A-201ENST00000304236 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
RAB40A-201ENST00000304236 NBPF15Q8N660 670 aa16.84■□□□□ 0.29
RAB40A-201ENST00000304236 CCDC39Q9UFE4 941 aa16.84■□□□□ 0.29
RAB40A-201ENST00000304236 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
RAB40A-201ENST00000304236 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
RAB40A-201ENST00000304236 DBNDD2Q9BQY9 259 aa16.84■□□□□ 0.29
RAB40A-201ENST00000304236 CICQ96RK0 1608 aaPredicted RBP16.83■□□□□ 0.29
RAB40A-201ENST00000304236 INTS5Q6P9B9 1019 aaKnown RBP16.83■□□□□ 0.28
RAB40A-201ENST00000304236 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.28
RAB40A-201ENST00000304236 NECAB1Q8N987 351 aa16.83■□□□□ 0.28
RAB40A-201ENST00000304236 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
RAB40A-201ENST00000304236 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
RAB40A-201ENST00000304236 FIBPO43427 364 aa16.82■□□□□ 0.28
RAB40A-201ENST00000304236 KBTBD3Q8NAB2 608 aa16.82■□□□□ 0.28
RAB40A-201ENST00000304236 SH3TC1Q8TE82 1336 aa16.82■□□□□ 0.28
RAB40A-201ENST00000304236 TOB2Q14106 344 aaPredicted RBP16.82■□□□□ 0.28
RAB40A-201ENST00000304236 RNF214Q8ND24 703 aa16.82■□□□□ 0.28
RAB40A-201ENST00000304236 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
RAB40A-201ENST00000304236 DNAJC2Q99543 621 aaKnown RBP16.82■□□□□ 0.28
RAB40A-201ENST00000304236 HELLSQ9NRZ9 838 aa16.82■□□□□ 0.28
RAB40A-201ENST00000304236 SRP68Q9UHB9 627 aaKnown RBP16.82■□□□□ 0.28
RAB40A-201ENST00000304236 C10orf71Q711Q0 1435 aa16.81■□□□□ 0.28
RAB40A-201ENST00000304236 KCPQ6ZWJ8 1503 aa16.81■□□□□ 0.28
RAB40A-201ENST00000304236 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
RAB40A-201ENST00000304236 KRT85P78386 507 aa16.81■□□□□ 0.28
RAB40A-201ENST00000304236 DNM1Q05193 864 aaKnown RBP16.81■□□□□ 0.28
RAB40A-201ENST00000304236 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
RAB40A-201ENST00000304236 CHMP3Q9Y3E7 222 aa16.81■□□□□ 0.28
RAB40A-201ENST00000304236 ZPR1O75312 459 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 CIAO1O76071 339 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 HMGB1P09429 215 aaKnown RBP16.8■□□□□ 0.28
RAB40A-201ENST00000304236 TTLL7Q6ZT98 887 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 ATG9AQ7Z3C6 839 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 ZNF609O15014 1411 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 TJP1Q07157 1748 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 ZNF500O60304 480 aaPredicted RBP16.8■□□□□ 0.28
RAB40A-201ENST00000304236 CYP19A1P11511 503 aaPredicted RBP16.8■□□□□ 0.28
RAB40A-201ENST00000304236 VSIG10Q8N0Z9 540 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 BCS1LQ9Y276 419 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 ZKSCAN5Q9Y2L8 839 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 ELP1O95163 1332 aa16.8■□□□□ 0.28
RAB40A-201ENST00000304236 EYA2O00167 538 aa16.79■□□□□ 0.28
RAB40A-201ENST00000304236 C4AP0C0L4 1744 aa16.79■□□□□ 0.28
RAB40A-201ENST00000304236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.79■□□□□ 0.28
RAB40A-201ENST00000304236 GPBP1L1Q9HC44 474 aaPredicted RBP16.79■□□□□ 0.28
RAB40A-201ENST00000304236 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
RAB40A-201ENST00000304236 SPEF2Q9C093 1822 aa16.79■□□□□ 0.28
RAB40A-201ENST00000304236 OFD1O75665 1012 aa16.78■□□□□ 0.28
RAB40A-201ENST00000304236 DPEP1P16444 411 aa16.78■□□□□ 0.28
RAB40A-201ENST00000304236 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.78■□□□□ 0.28
RAB40A-201ENST00000304236 PAG1Q9NWQ8 432 aa16.78■□□□□ 0.28
RAB40A-201ENST00000304236 KIF13BQ9NQT8 1826 aa16.78■□□□□ 0.28
RAB40A-201ENST00000304236 A1BGP04217 495 aa16.78■□□□□ 0.28
RAB40A-201ENST00000304236 NEUROD6Q96NK8 337 aa16.78■□□□□ 0.28
RAB40A-201ENST00000304236 DSCC1Q9BVC3 393 aa16.78■□□□□ 0.28
RAB40A-201ENST00000304236 SCAND2PQ9GZW5 306 aaPredicted RBP16.78■□□□□ 0.28
RAB40A-201ENST00000304236 LRRFIP1Q32MZ4 808 aaKnown RBP16.77■□□□□ 0.28
RAB40A-201ENST00000304236 DDX46Q7L014 1031 aaKnown RBP16.77■□□□□ 0.28
RAB40A-201ENST00000304236 GTF3C6Q969F1 213 aa16.77■□□□□ 0.28
RAB40A-201ENST00000304236 TEX13AQ9BXU3 409 aaPredicted RBP16.77■□□□□ 0.28
RAB40A-201ENST00000304236 TAF6LQ9Y6J9 622 aa16.77■□□□□ 0.28
RAB40A-201ENST00000304236 DDR1Q08345 913 aa16.77■□□□□ 0.27
RAB40A-201ENST00000304236 ISCA1Q9BUE6 129 aa16.77■□□□□ 0.27
RAB40A-201ENST00000304236 CYP21A2P08686 494 aa16.76■□□□□ 0.27
RAB40A-201ENST00000304236 TM4SF1P30408 202 aa16.76■□□□□ 0.27
RAB40A-201ENST00000304236 TRIM28Q13263 835 aaKnown RBP16.76■□□□□ 0.27
RAB40A-201ENST00000304236 ZMYM1Q5SVZ6 1142 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms