RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 CHD4Q14839 1912 aa24.74■■□□□ 1.55
SCAMP3-201ENST00000302631 KCNJ4P48050 445 aa24.73■■□□□ 1.55
SCAMP3-201ENST00000302631 ATP2B3Q16720 1220 aa24.73■■□□□ 1.55
SCAMP3-201ENST00000302631 GPR101Q96P66 508 aaPredicted RBP24.73■■□□□ 1.55
SCAMP3-201ENST00000302631 ZNF609O15014 1411 aa24.73■■□□□ 1.55
SCAMP3-201ENST00000302631 KLRK1P26718 216 aa24.72■■□□□ 1.55
SCAMP3-201ENST00000302631 ZC3H12CQ9C0D7 883 aaKnown RBP24.72■■□□□ 1.55
SCAMP3-201ENST00000302631 AOC3Q16853 763 aa24.71■■□□□ 1.55
SCAMP3-201ENST00000302631 TNNI3KQ59H18 835 aa24.71■■□□□ 1.55
SCAMP3-201ENST00000302631 FPGT-TNNI3KV9GXZ4 949 aa24.71■■□□□ 1.55
SCAMP3-201ENST00000302631 A0A1B0GUL7 405 aa24.7■■□□□ 1.55
SCAMP3-201ENST00000302631 ZBTB22O15209 634 aa24.7■■□□□ 1.55
SCAMP3-201ENST00000302631 PPIP5K2O43314 1243 aa24.7■■□□□ 1.55
SCAMP3-201ENST00000302631 IFIT1P09914 478 aaKnown RBP24.7■■□□□ 1.55
SCAMP3-201ENST00000302631 SLC5A1P13866 664 aa24.7■■□□□ 1.55
SCAMP3-201ENST00000302631 TIMM10P62072 90 aa24.7■■□□□ 1.55
SCAMP3-201ENST00000302631 LRRCC1Q9C099 1032 aa24.7■■□□□ 1.55
SCAMP3-201ENST00000302631 RIMBP2O15034 1052 aa24.69■■□□□ 1.54
SCAMP3-201ENST00000302631 FBXO33Q7Z6M2 555 aa24.69■■□□□ 1.54
SCAMP3-201ENST00000302631 EAF2Q96CJ1 260 aaPredicted RBP24.69■■□□□ 1.54
SCAMP3-201ENST00000302631 FAM84BQ96KN1 310 aaPredicted RBP24.69■■□□□ 1.54
SCAMP3-201ENST00000302631 LARGE2Q8N3Y3 721 aa24.69■■□□□ 1.54
SCAMP3-201ENST00000302631 PSME4Q14997 1843 aa24.68■■□□□ 1.54
SCAMP3-201ENST00000302631 COA1Q9GZY4 146 aa24.68■■□□□ 1.54
SCAMP3-201ENST00000302631 IL1RAPL2Q9NP60 686 aa24.68■■□□□ 1.54
SCAMP3-201ENST00000302631 SCN9AQ15858 1988 aa24.67■■□□□ 1.54
SCAMP3-201ENST00000302631 C9orf131Q5VYM1 1079 aa24.67■■□□□ 1.54
SCAMP3-201ENST00000302631 CLASRPQ8N2M8 674 aaKnown RBP24.67■■□□□ 1.54
SCAMP3-201ENST00000302631 XAGE2Q96GT9 111 aa24.67■■□□□ 1.54
SCAMP3-201ENST00000302631 TIAM2Q8IVF5 1701 aa24.67■■□□□ 1.54
SCAMP3-201ENST00000302631 KDM2BQ8NHM5 1336 aa24.67■■□□□ 1.54
SCAMP3-201ENST00000302631 FZD9O00144 591 aa24.66■■□□□ 1.54
SCAMP3-201ENST00000302631 APBB1O00213 710 aa24.66■■□□□ 1.54
SCAMP3-201ENST00000302631 IL1R1P14778 569 aa24.66■■□□□ 1.54
SCAMP3-201ENST00000302631 PODNQ7Z5L7 613 aa24.66■■□□□ 1.54
SCAMP3-201ENST00000302631 RNF181Q9P0P0 153 aa24.66■■□□□ 1.54
SCAMP3-201ENST00000302631 ZNF646O15015 1829 aaPredicted RBP24.65■■□□□ 1.54
SCAMP3-201ENST00000302631 ADORA1P30542 326 aa24.65■■□□□ 1.54
SCAMP3-201ENST00000302631 HIBADHP31937 336 aaKnown RBP24.65■■□□□ 1.54
SCAMP3-201ENST00000302631 GYG1P46976 350 aa24.65■■□□□ 1.54
SCAMP3-201ENST00000302631 CD209Q9NNX6 404 aa24.65■■□□□ 1.54
SCAMP3-201ENST00000302631 ZC3H4Q9UPT8 1303 aaKnown RBP24.65■■□□□ 1.54
SCAMP3-201ENST00000302631 SMARCA5O60264 1052 aaPredicted RBP24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 ECE2O60344 883 aa24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 DOK7Q18PE1 504 aa24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 CAVIN4Q5BKX8 364 aa24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 ZNF804AQ7Z570 1209 aa24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 NIM1KQ8IY84 436 aa24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 TDRD7Q8NHU6 1098 aaKnown RBP24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 JDP2Q8WYK2 163 aa24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 NEUROD6Q96NK8 337 aa24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 PPP4R2Q9NY27 417 aa24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 DBNLQ9UJU6 430 aaKnown RBP24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 ZNRF3Q9ULT6 936 aa24.64■■□□□ 1.54
SCAMP3-201ENST00000302631 YDJCA8MPS7 323 aa24.63■■□□□ 1.53
SCAMP3-201ENST00000302631 BCAMP50895 628 aa24.63■■□□□ 1.53
SCAMP3-201ENST00000302631 AACSQ86V21 672 aa24.63■■□□□ 1.53
SCAMP3-201ENST00000302631 DBNDD2Q9BQY9 259 aa24.63■■□□□ 1.53
SCAMP3-201ENST00000302631 DBNDD1Q9H9R9 158 aa24.63■■□□□ 1.53
SCAMP3-201ENST00000302631 NUCB1Q02818 461 aa24.62■■□□□ 1.53
SCAMP3-201ENST00000302631 ANKRD45Q5TZF3 282 aa24.62■■□□□ 1.53
SCAMP3-201ENST00000302631 CCDC8Q9H0W5 538 aaPredicted RBP24.62■■□□□ 1.53
SCAMP3-201ENST00000302631 MYH13Q9UKX3 1938 aa24.62■■□□□ 1.53
SCAMP3-201ENST00000302631 CCDC102BQ68D86 513 aa24.61■■□□□ 1.53
SCAMP3-201ENST00000302631 ZNF512BQ96KM6 892 aaPredicted RBP24.61■■□□□ 1.53
SCAMP3-201ENST00000302631 TLR7Q9NYK1 1049 aaKnown RBP24.61■■□□□ 1.53
SCAMP3-201ENST00000302631 AKAP11Q9UKA4 1901 aa24.61■■□□□ 1.53
SCAMP3-201ENST00000302631 PHKA1P46020 1223 aa24.61■■□□□ 1.53
SCAMP3-201ENST00000302631 CENPQQ7L2Z9 268 aaPredicted RBP24.6■■□□□ 1.53
SCAMP3-201ENST00000302631 CCDC136Q96JN2 1154 aa24.6■■□□□ 1.53
SCAMP3-201ENST00000302631 ARID4AP29374 1257 aaPredicted RBP24.59■■□□□ 1.53
SCAMP3-201ENST00000302631 KCNQ5Q9NR82 932 aa24.59■■□□□ 1.53
SCAMP3-201ENST00000302631 FAM205AQ6ZU69 1335 aa24.58■■□□□ 1.53
SCAMP3-201ENST00000302631 SALL3Q9BXA9 1300 aa24.58■■□□□ 1.53
SCAMP3-201ENST00000302631 G3V3G9 751 aa24.58■■□□□ 1.53
SCAMP3-201ENST00000302631 IFIT2P09913 472 aaKnown RBP24.58■■□□□ 1.53
SCAMP3-201ENST00000302631 CXCL9Q07325 125 aa24.58■■□□□ 1.53
SCAMP3-201ENST00000302631 DCAF8Q5TAQ9 597 aa24.58■■□□□ 1.53
SCAMP3-201ENST00000302631 CHD1LQ86WJ1 897 aa24.58■■□□□ 1.53
SCAMP3-201ENST00000302631 VPS37DQ86XT2 251 aa24.58■■□□□ 1.53
SCAMP3-201ENST00000302631 SEMA3EO15041 775 aa24.57■■□□□ 1.52
SCAMP3-201ENST00000302631 CCDC158Q5M9N0 1113 aa24.57■■□□□ 1.52
SCAMP3-201ENST00000302631 B4GALNT3Q6L9W6 998 aa24.57■■□□□ 1.52
SCAMP3-201ENST00000302631 GNL3LQ9NVN8 582 aaKnown RBP24.57■■□□□ 1.52
SCAMP3-201ENST00000302631 PDS5AQ29RF7 1337 aaKnown RBP24.56■■□□□ 1.52
SCAMP3-201ENST00000302631 EIF6P56537 245 aaKnown RBP24.56■■□□□ 1.52
SCAMP3-201ENST00000302631 GORABQ5T7V8 394 aa24.56■■□□□ 1.52
SCAMP3-201ENST00000302631 C16orf71Q8IYS4 520 aaPredicted RBP24.56■■□□□ 1.52
SCAMP3-201ENST00000302631 ZNF541Q9H0D2 1346 aa24.56■■□□□ 1.52
SCAMP3-201ENST00000302631 VIL1P09327 827 aaKnown RBP24.55■■□□□ 1.52
SCAMP3-201ENST00000302631 UQCRFS1P1P0C7P4 283 aa24.55■■□□□ 1.52
SCAMP3-201ENST00000302631 STRIP1Q5VSL9 837 aa24.55■■□□□ 1.52
SCAMP3-201ENST00000302631 COL1A1P02452 1464 aaPredicted RBP24.55■■□□□ 1.52
SCAMP3-201ENST00000302631 USP17L3A6NCW0 530 aa24.54■■□□□ 1.52
SCAMP3-201ENST00000302631 USP17L4A6NCW7 530 aa24.54■■□□□ 1.52
SCAMP3-201ENST00000302631 FKBP1AP62942 108 aaKnown RBP24.54■■□□□ 1.52
SCAMP3-201ENST00000302631 CIAPIN1Q6FI81 312 aa24.54■■□□□ 1.52
SCAMP3-201ENST00000302631 USP17L1Q7RTZ2 530 aa24.54■■□□□ 1.52
SCAMP3-201ENST00000302631 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.54■■□□□ 1.52
SCAMP3-201ENST00000302631 LNPKQ9C0E8 428 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms