RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 NFKBIEO00221 500 aa11.7□□□□□ -0.54
RFX3-201ENST00000302303 PUM3Q15397 648 aaKnown RBP11.7□□□□□ -0.54
RFX3-201ENST00000302303 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
RFX3-201ENST00000302303 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
RFX3-201ENST00000302303 LPIN2Q92539 896 aa11.7□□□□□ -0.54
RFX3-201ENST00000302303 XAGE2Q96GT9 111 aa11.7□□□□□ -0.54
RFX3-201ENST00000302303 FAM84BQ96KN1 310 aaPredicted RBP11.7□□□□□ -0.54
RFX3-201ENST00000302303 ARFGEF1Q9Y6D6 1849 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 FER1L6Q2WGJ9 1857 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 ATP2B4P23634 1241 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 CCDC93Q567U6 631 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 FBXO33Q7Z6M2 555 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 AACSQ86V21 672 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 CLASRPQ8N2M8 674 aaKnown RBP11.69□□□□□ -0.54
RFX3-201ENST00000302303 PSMD1Q99460 953 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 ANKIB1Q9P2G1 1089 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 AKAP2Q9Y2D5 859 aa11.69□□□□□ -0.54
RFX3-201ENST00000302303 COL4A5P29400 1685 aa11.68□□□□□ -0.54
RFX3-201ENST00000302303 DPP8Q6V1X1 898 aaPredicted RBP11.68□□□□□ -0.54
RFX3-201ENST00000302303 STAP2Q9UGK3 403 aa11.68□□□□□ -0.54
RFX3-201ENST00000302303 GGA1Q9UJY5 639 aa11.68□□□□□ -0.54
RFX3-201ENST00000302303 ARAP2Q8WZ64 1704 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 UFL1O94874 794 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 PHKA1P46020 1223 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 GYG1P46976 350 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 BCAMP50895 628 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 FKBP4Q02790 459 aaKnown RBP eCLIP11.67□□□□□ -0.54
RFX3-201ENST00000302303 SCARF1Q14162 830 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 TSHZ3Q63HK5 1081 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 RTKN2Q8IZC4 609 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 PI4K2BQ8TCG2 481 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 NEUROD6Q96NK8 337 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 MED23Q9ULK4 1368 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
RFX3-201ENST00000302303 PDE1AP54750 535 aa11.66□□□□□ -0.54
RFX3-201ENST00000302303 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
RFX3-201ENST00000302303 CCDC102BQ68D86 513 aa11.66□□□□□ -0.54
RFX3-201ENST00000302303 OSBPL3Q9H4L5 887 aa11.66□□□□□ -0.54
RFX3-201ENST00000302303 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
RFX3-201ENST00000302303 IFIT1P09914 478 aaKnown RBP11.65□□□□□ -0.54
RFX3-201ENST00000302303 SLC5A1P13866 664 aa11.65□□□□□ -0.54
RFX3-201ENST00000302303 RASSF7Q02833 373 aa11.65□□□□□ -0.54
RFX3-201ENST00000302303 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
RFX3-201ENST00000302303 SOGA3Q5TF21 947 aa11.65□□□□□ -0.54
RFX3-201ENST00000302303 BCL11AQ9H165 835 aa11.65□□□□□ -0.54
RFX3-201ENST00000302303 ZNF277Q9NRM2 450 aaPredicted RBP11.65□□□□□ -0.54
RFX3-201ENST00000302303 RIMBP2O15034 1052 aa11.65□□□□□ -0.55
RFX3-201ENST00000302303 IFIT2P09913 472 aaKnown RBP11.65□□□□□ -0.55
RFX3-201ENST00000302303 ARID4AP29374 1257 aaPredicted RBP11.65□□□□□ -0.55
RFX3-201ENST00000302303 AOC3Q16853 763 aa11.65□□□□□ -0.55
RFX3-201ENST00000302303 WASHC4Q2M389 1173 aa11.65□□□□□ -0.55
RFX3-201ENST00000302303 TDRD7Q8NHU6 1098 aaKnown RBP11.65□□□□□ -0.55
RFX3-201ENST00000302303 ZNF512BQ96KM6 892 aaPredicted RBP11.65□□□□□ -0.55
RFX3-201ENST00000302303 CD209Q9NNX6 404 aa11.65□□□□□ -0.55
RFX3-201ENST00000302303 KCNQ5Q9NR82 932 aa11.65□□□□□ -0.55
RFX3-201ENST00000302303 COL1A1P02452 1464 aaPredicted RBP11.64□□□□□ -0.55
RFX3-201ENST00000302303 YDJCA8MPS7 323 aa11.64□□□□□ -0.55
RFX3-201ENST00000302303 IL1R1P14778 569 aa11.64□□□□□ -0.55
RFX3-201ENST00000302303 ATP5JP18859 108 aa11.64□□□□□ -0.55
RFX3-201ENST00000302303 MX1P20591 662 aa11.64□□□□□ -0.55
RFX3-201ENST00000302303 HIBADHP31937 336 aaKnown RBP11.64□□□□□ -0.55
RFX3-201ENST00000302303 MCAMP43121 646 aa11.64□□□□□ -0.55
RFX3-201ENST00000302303 KCNJ4P48050 445 aa11.64□□□□□ -0.55
RFX3-201ENST00000302303 PI16Q6UXB8 463 aa11.64□□□□□ -0.55
RFX3-201ENST00000302303 VPS33BQ9H267 617 aa11.64□□□□□ -0.55
RFX3-201ENST00000302303 ECHDC1Q9NTX5 307 aa11.64□□□□□ -0.55
RFX3-201ENST00000302303 CHD4Q14839 1912 aa11.63□□□□□ -0.55
RFX3-201ENST00000302303 AKAP11Q9UKA4 1901 aa11.63□□□□□ -0.55
RFX3-201ENST00000302303 GSPT1P15170 499 aaKnown RBP11.63□□□□□ -0.55
RFX3-201ENST00000302303 IARSP41252 1262 aaKnown RBP11.63□□□□□ -0.55
RFX3-201ENST00000302303 RASGRF1Q13972 1273 aa11.63□□□□□ -0.55
RFX3-201ENST00000302303 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
RFX3-201ENST00000302303 ZC3H12CQ9C0D7 883 aaKnown RBP11.63□□□□□ -0.55
RFX3-201ENST00000302303 TAOK3Q9H2K8 898 aa11.63□□□□□ -0.55
RFX3-201ENST00000302303 HMG20BQ9P0W2 317 aa11.63□□□□□ -0.55
RFX3-201ENST00000302303 NDUFB9Q9Y6M9 179 aa11.63□□□□□ -0.55
RFX3-201ENST00000302303 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
RFX3-201ENST00000302303 ARHGAP27Q6ZUM4 889 aa11.62□□□□□ -0.55
RFX3-201ENST00000302303 SUPT20HQ8NEM7 779 aa11.62□□□□□ -0.55
RFX3-201ENST00000302303 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.62□□□□□ -0.55
RFX3-201ENST00000302303 EDC3Q96F86 508 aaKnown RBP11.62□□□□□ -0.55
RFX3-201ENST00000302303 COA1Q9GZY4 146 aa11.62□□□□□ -0.55
RFX3-201ENST00000302303 TMX4Q9H1E5 349 aaPredicted RBP11.62□□□□□ -0.55
RFX3-201ENST00000302303 DBNDD1Q9H9R9 158 aa11.62□□□□□ -0.55
RFX3-201ENST00000302303 IQSEC3Q9UPP2 1182 aaPredicted RBP11.62□□□□□ -0.55
RFX3-201ENST00000302303 ZNF646O15015 1829 aaPredicted RBP11.62□□□□□ -0.55
RFX3-201ENST00000302303 PPIP5K2O43314 1243 aa11.61□□□□□ -0.55
RFX3-201ENST00000302303 CAVIN4Q5BKX8 364 aa11.61□□□□□ -0.55
RFX3-201ENST00000302303 EYA3Q99504 573 aa11.61□□□□□ -0.55
RFX3-201ENST00000302303 HAUS7Q99871 368 aa11.61□□□□□ -0.55
RFX3-201ENST00000302303 BOLA2Q9H3K6 86 aa11.61□□□□□ -0.55
RFX3-201ENST00000302303 ANTXR1Q9H6X2 564 aa11.61□□□□□ -0.55
RFX3-201ENST00000302303 SCN9AQ15858 1988 aa11.61□□□□□ -0.55
RFX3-201ENST00000302303 SBF1O95248 1867 aa11.61□□□□□ -0.55
RFX3-201ENST00000302303 AOX1Q06278 1338 aa11.61□□□□□ -0.55
RFX3-201ENST00000302303 CYP2E1P05181 493 aaPredicted RBP11.6□□□□□ -0.55
RFX3-201ENST00000302303 ZAP70P43403 619 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 RGS3P49796 1198 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 GRIK5Q16478 980 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms