RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 C1orf167Q5SNV9 1468 aa13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 NCOA3Q9Y6Q9 1424 aa13.21□□□□□ -0.3
ATP1A3-201ENST00000302102 CDK12Q9NYV4 1490 aaPredicted RBP13.21□□□□□ -0.3
ATP1A3-201ENST00000302102 A0A0G2JLW4 131 aa13.21□□□□□ -0.3
ATP1A3-201ENST00000302102 hCG_1642624A0A1W2PR95 340 aa13.21□□□□□ -0.3
ATP1A3-201ENST00000302102 TDO2P48775 406 aa13.21□□□□□ -0.3
ATP1A3-201ENST00000302102 STX1AQ16623 288 aa13.21□□□□□ -0.3
ATP1A3-201ENST00000302102 MRVI1Q9Y6F6 885 aa13.21□□□□□ -0.3
ATP1A3-201ENST00000302102 NEURL1BA8MQ27 555 aa13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 A0A1B0GUL7 405 aa13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 SYT10Q6XYQ8 523 aa13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 DNAI1Q9UI46 699 aa13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 RGPD8O14715 1765 aaPredicted RBP13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 ERICH2A1L162 156 aa13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 PRC1O43663 620 aa13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 KIF18AQ8NI77 898 aa13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
ATP1A3-201ENST00000302102 ANKARQ7Z5J8 1434 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 SCRN1Q12765 414 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 IFIT5Q13325 482 aaKnown RBP13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 LRRFIP1Q32MZ4 808 aaKnown RBP13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 SLC9C2Q5TAH2 1124 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 DHX32Q7L7V1 743 aaKnown RBP13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 MAP4K1Q92918 833 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 SLC26A6Q9BXS9 759 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 TAF5LO75529 589 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 ZNF75DP51815 510 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 CCDC94Q9BW85 323 aaPredicted RBP13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 ARHGEF10O15013 1369 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 NECTIN1Q15223 517 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 TEX35Q5T0J7 233 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 KIF6Q6ZMV9 814 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 GPIHBP1Q8IV16 184 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 TTC14Q96N46 770 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 JAG2Q9Y219 1238 aa13.19□□□□□ -0.3
ATP1A3-201ENST00000302102 COL3A1P02461 1466 aaPredicted RBP13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 MAP2P11137 1827 aaKnown RBP13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 IFIT3O14879 490 aaKnown RBP13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 IGKV5-2P06315 115 aa13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 STX17P56962 302 aa13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 CLEC17AQ6ZS10 378 aa13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 GTF3C6Q969F1 213 aa13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 AIFM3Q96NN9 605 aa13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 HMG20BQ9P0W2 317 aa13.18□□□□□ -0.3
ATP1A3-201ENST00000302102 SNAP23O00161 211 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 AP5Z1O43299 807 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 DHX8Q14562 1220 aaKnown RBP13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 MIGA1Q8NAN2 632 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 CNNM3Q8NE01 707 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 MRPS27Q92552 414 aaKnown RBP13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 UBXN4Q92575 508 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 LRP2BPQ9P2M1 347 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 CRB1P82279 1406 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 AFMP43652 599 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 POLA2Q14181 598 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 ELF2Q15723 593 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 CLSTN2Q9H4D0 955 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
ATP1A3-201ENST00000302102 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 METTL22Q9BUU2 404 aaPredicted RBP13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 NAPBQ9H115 298 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 RPAP1Q9BWH6 1393 aaPredicted RBP13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 B4E1Z4 1266 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 SPTLC2O15270 562 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 TNNT3P45378 269 aaPredicted RBP13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 STAMQ92783 540 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 PGBD1Q96JS3 809 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 COBLO75128 1261 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 ADORA1P30542 326 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 KIAA1524Q8TCG1 905 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 CTNNA3Q9UI47 895 aa13.16□□□□□ -0.3
ATP1A3-201ENST00000302102 GOLGA8AA7E2F4 631 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 TOP1P11387 765 aaKnown RBP13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 SYKP43405 635 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 TOB2Q14106 344 aaPredicted RBP13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 INCENPQ9NQS7 918 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 OVOS2A0A0J9YW53 1432 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 OVOS2Q6IE36 1432 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 E7EWF7 191 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms