RNA–Protein interactions for RNA: ENST00000301821.10

RPSA-201, Transcript of ribosomal protein SA, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPSA, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-201ENST00000301821 JARID2Q92833 1246 aaPredicted RBP13.24□□□□□ -0.29
RPSA-201ENST00000301821 MYD88Q99836 296 aa13.24□□□□□ -0.29
RPSA-201ENST00000301821 MXD3Q9BW11 206 aa13.24□□□□□ -0.29
RPSA-201ENST00000301821 SPEF2Q9C093 1822 aa13.24□□□□□ -0.29
RPSA-201ENST00000301821 FKTNO75072 461 aa13.23□□□□□ -0.29
RPSA-201ENST00000301821 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
RPSA-201ENST00000301821 ATP2B4P23634 1241 aa13.23□□□□□ -0.29
RPSA-201ENST00000301821 TM4SF4P48230 202 aa13.23□□□□□ -0.29
RPSA-201ENST00000301821 SREBF2Q12772 1141 aa13.23□□□□□ -0.29
RPSA-201ENST00000301821 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
RPSA-201ENST00000301821 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29not detected■□□□□ 11.1
RPSA-201ENST00000301821 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
RPSA-201ENST00000301821 PODNQ7Z5L7 613 aa13.23□□□□□ -0.29
RPSA-201ENST00000301821 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
RPSA-201ENST00000301821 GCC1Q96CN9 775 aa13.23□□□□□ -0.29
RPSA-201ENST00000301821 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
RPSA-201ENST00000301821 ZNF646O15015 1829 aaPredicted RBP13.23□□□□□ -0.29
RPSA-201ENST00000301821 PDE8AO60658 829 aa13.22□□□□□ -0.29
RPSA-201ENST00000301821 SASH1O94885 1247 aa13.22□□□□□ -0.29
RPSA-201ENST00000301821 NOM1Q5C9Z4 860 aaKnown RBP13.22□□□□□ -0.29
RPSA-201ENST00000301821 R3HDMLQ9H3Y0 253 aa13.22□□□□□ -0.29
RPSA-201ENST00000301821 PRKRIP1Q9H875 184 aaPredicted RBP13.22□□□□□ -0.29
RPSA-201ENST00000301821 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
RPSA-201ENST00000301821 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
RPSA-201ENST00000301821 MED23Q9ULK4 1368 aa13.21□□□□□ -0.29
RPSA-201ENST00000301821 WTIPA6NIX2 430 aaPredicted RBP13.21□□□□□ -0.29
RPSA-201ENST00000301821 WNT10BO00744 389 aa13.21□□□□□ -0.29
RPSA-201ENST00000301821 PCCAP05165 728 aaPredicted RBP13.21□□□□□ -0.29
RPSA-201ENST00000301821 PTPN12Q05209 780 aaKnown RBP13.21□□□□□ -0.29
RPSA-201ENST00000301821 OGFOD1Q8N543 542 aa13.21□□□□□ -0.29
RPSA-201ENST00000301821 RUNDC1Q96C34 613 aa13.21□□□□□ -0.29
RPSA-201ENST00000301821 PHAXQ9H814 394 aaKnown RBP13.21□□□□□ -0.29
RPSA-201ENST00000301821 DACT2Q5SW24 774 aa13.2□□□□□ -0.3
RPSA-201ENST00000301821 ARMC9Q7Z3E5 817 aa13.2□□□□□ -0.3
RPSA-201ENST00000301821 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
RPSA-201ENST00000301821 TRIM17Q9Y577 477 aa13.2□□□□□ -0.3
RPSA-201ENST00000301821 MYO3BQ8WXR4 1341 aa13.19□□□□□ -0.3
RPSA-201ENST00000301821 HABP4Q5JVS0 413 aaKnown RBP13.19□□□□□ -0.3
RPSA-201ENST00000301821 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
RPSA-201ENST00000301821 CDC5LQ99459 802 aaKnown RBP13.19□□□□□ -0.3
RPSA-201ENST00000301821 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
RPSA-201ENST00000301821 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
RPSA-201ENST00000301821 ANGEL1Q9UNK9 670 aaKnown RBP13.19□□□□□ -0.3
RPSA-201ENST00000301821 FZD1Q9UP38 647 aa13.19□□□□□ -0.3
RPSA-201ENST00000301821 POTEFA5A3E0 1075 aa13.18□□□□□ -0.3
RPSA-201ENST00000301821 CTSWP56202 376 aa13.18□□□□□ -0.3
RPSA-201ENST00000301821 SPRYD7Q5W111 196 aa13.18□□□□□ -0.3
RPSA-201ENST00000301821 APOBEC3FQ8IUX4 373 aaKnown RBP13.18□□□□□ -0.3
RPSA-201ENST00000301821 ELL2O00472 640 aaPredicted RBP13.17□□□□□ -0.3
RPSA-201ENST00000301821 ALDH1A1P00352 501 aa13.17□□□□□ -0.3
RPSA-201ENST00000301821 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
RPSA-201ENST00000301821 STRIP1Q5VSL9 837 aa13.17□□□□□ -0.3
RPSA-201ENST00000301821 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
RPSA-201ENST00000301821 KIAA0825Q8IV33 1275 aa13.17□□□□□ -0.3
RPSA-201ENST00000301821 COA1Q9GZY4 146 aa13.17□□□□□ -0.3
RPSA-201ENST00000301821 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
RPSA-201ENST00000301821 MYH3P11055 1940 aa13.16□□□□□ -0.3
RPSA-201ENST00000301821 MANSC4A6NHS7 340 aaPredicted RBP13.16□□□□□ -0.3
RPSA-201ENST00000301821 LDLRAD1Q5T700 205 aa13.16□□□□□ -0.3
RPSA-201ENST00000301821 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
RPSA-201ENST00000301821 METTL22Q9BUU2 404 aaPredicted RBP13.16□□□□□ -0.3
RPSA-201ENST00000301821 GREM2Q9H772 168 aa13.16□□□□□ -0.3
RPSA-201ENST00000301821 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
RPSA-201ENST00000301821 RBBP6Q7Z6E9 1792 aaKnown RBP13.15□□□□□ -0.3
RPSA-201ENST00000301821 APAF1O14727 1248 aa13.15□□□□□ -0.3
RPSA-201ENST00000301821 DDX58O95786 925 aaKnown RBP13.15□□□□□ -0.3
RPSA-201ENST00000301821 KLRK1P26718 216 aa13.15□□□□□ -0.3
RPSA-201ENST00000301821 CCDC184Q52MB2 194 aa13.15□□□□□ -0.3
RPSA-201ENST00000301821 TXNRD3Q86VQ6 643 aa13.15□□□□□ -0.3
RPSA-201ENST00000301821 BSDC1Q9NW68 430 aaPredicted RBP13.15□□□□□ -0.3
RPSA-201ENST00000301821 SSC5DA1L4H1 1573 aa13.15□□□□□ -0.3
RPSA-201ENST00000301821 IGF2BP3O00425 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
RPSA-201ENST00000301821 GTF2IP78347 998 aa13.14□□□□□ -0.31
RPSA-201ENST00000301821 INTS3Q68E01 1043 aaKnown RBP13.14□□□□□ -0.31
RPSA-201ENST00000301821 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
RPSA-201ENST00000301821 TTLL11Q8NHH1 800 aa13.14□□□□□ -0.31
RPSA-201ENST00000301821 CD99L2Q8TCZ2 262 aa13.14□□□□□ -0.31
RPSA-201ENST00000301821 SLC10A4Q96EP9 437 aa13.14□□□□□ -0.31
RPSA-201ENST00000301821 WNK4Q96J92 1243 aa13.14□□□□□ -0.31
RPSA-201ENST00000301821 CLMNQ96JQ2 1002 aa13.14□□□□□ -0.31
RPSA-201ENST00000301821 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
RPSA-201ENST00000301821 LAMB1P07942 1786 aa13.13□□□□□ -0.31
RPSA-201ENST00000301821 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
RPSA-201ENST00000301821 ERO1AQ96HE7 468 aa13.13□□□□□ -0.31
RPSA-201ENST00000301821 DEFB129Q9H1M3 183 aa13.13□□□□□ -0.31
RPSA-201ENST00000301821 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
RPSA-201ENST00000301821 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
RPSA-201ENST00000301821 ECM29Q5VYK3 1845 aa13.12□□□□□ -0.31
RPSA-201ENST00000301821 ZBTB48P10074 688 aaPredicted RBP13.12□□□□□ -0.31
RPSA-201ENST00000301821 EN2P19622 333 aaPredicted RBP13.12□□□□□ -0.31
RPSA-201ENST00000301821 KCNJ4P48050 445 aa13.12□□□□□ -0.31
RPSA-201ENST00000301821 INHBEP58166 350 aa13.12□□□□□ -0.31
RPSA-201ENST00000301821 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
RPSA-201ENST00000301821 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
RPSA-201ENST00000301821 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
RPSA-201ENST00000301821 CLRN2A0PK11 232 aa13.11□□□□□ -0.31
RPSA-201ENST00000301821 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
RPSA-201ENST00000301821 PPP1R12BO60237 982 aaPredicted RBP13.11□□□□□ -0.31
RPSA-201ENST00000301821 IGKV5-2P06315 115 aa13.11□□□□□ -0.31
RPSA-201ENST00000301821 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms