RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ME1P48163 572 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 NCAPHQ15003 741 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 FBXW7Q969H0 707 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 CARD6Q9BX69 1037 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 RASSF4Q9H2L5 321 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 BOLA2Q9H3K6 86 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 TLR7Q9NYK1 1049 aaKnown RBP15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 BCCIPQ9P287 314 aaKnown RBP eCLIP15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 NCAPD2Q15021 1401 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 AMPHP49418 695 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 EIF4A1P60842 406 aaKnown RBP15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 SMC1AQ14683 1233 aaKnown RBP15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 ZSCAN26Q16670 478 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 CCDC8Q9H0W5 538 aaPredicted RBP15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 KDM3BQ7LBC6 1761 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 CEMIPQ8WUJ3 1361 aa15.68■□□□□ 0.1
RPUSD4-201ENST00000298317 A0A1W2PQ27 194 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 A0A1W2PQ64 194 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 A0A1W2PQD8 194 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 CTDNEP1O95476 244 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 EVCP57679 992 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 TMX1Q9H3N1 280 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 PSD3Q9NYI0 1048 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 PCDHA7Q9UN72 937 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 MRC1P22897 1456 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 URI1O94763 535 aaPredicted RBP15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 REXO1L1PQ8IX06 675 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 SDF4Q9BRK5 362 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 ZCCHC17Q9NP64 241 aaKnown RBP15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 SALL1Q9NSC2 1324 aa15.67■□□□□ 0.1
RPUSD4-201ENST00000298317 PTPDC1A2A3K4 754 aa15.66■□□□□ 0.1
RPUSD4-201ENST00000298317 ADALQ6DHV7 355 aa15.66■□□□□ 0.1
RPUSD4-201ENST00000298317 GPR161Q8N6U8 529 aaKnown RBP15.66■□□□□ 0.1
RPUSD4-201ENST00000298317 MYO1CO00159 1063 aa15.66■□□□□ 0.1
RPUSD4-201ENST00000298317 FCHSD1Q86WN1 690 aa15.66■□□□□ 0.1
RPUSD4-201ENST00000298317 ATG3Q9NT62 314 aa15.66■□□□□ 0.1
RPUSD4-201ENST00000298317 NDUFA8P51970 172 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 CCDC191Q8NCU4 936 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 GOLGA5Q8TBA6 731 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 EXOC4Q96A65 974 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 DIP2AQ14689 1571 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 A0A1B0GVL5 298 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 FOSBP53539 338 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 NLRP12P59046 1061 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 FANCCQ00597 558 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 IQUBQ8NA54 791 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 FBXO18Q8NFZ0 1043 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 RTEL1Q9NZ71 1219 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 CWC15Q9P013 229 aaKnown RBP15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 RSPH14Q9UHP6 348 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 KCNG1Q9UIX4 513 aa15.65■□□□□ 0.1
RPUSD4-201ENST00000298317 CYP21A2P08686 494 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 ZRSR1Q15695 479 aaKnown RBP15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 RSRC2Q7L4I2 434 aaKnown RBP15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 MPHOSPH8Q99549 860 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 HSD3B7Q9H2F3 369 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 EPC1Q9H2F5 836 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 AGLP35573 1532 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 RFX7Q2KHR2 1363 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 VWA3AA6NCI4 1184 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 IKBKBO14920 756 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 ANXA1P04083 346 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 G3BP1Q13283 466 aaKnown RBP eCLIP15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 AXDND1Q5T1B0 1012 aaPredicted RBP15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 CCDC34Q96HJ3 373 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 AK7Q96M32 723 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 FUT8Q9BYC5 575 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 LCMT1Q9UIC8 334 aa15.64■□□□□ 0.09
RPUSD4-201ENST00000298317 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 MAP3K9P80192 1104 aa15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 SRLQ86TD4 932 aa15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 KAZALD1Q96I82 304 aa15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 LRRC2Q9BYS8 371 aa15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 ARFGAP3Q9NP61 516 aa15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 SLIT1O75093 1534 aa15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 PIK3C2AO00443 1686 aa15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 APPP05067 770 aa15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 NOP2P46087 812 aaKnown RBP15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 LAMA4Q16363 1823 aa15.63■□□□□ 0.09
RPUSD4-201ENST00000298317 ZNF609O15014 1411 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 TRIM66O15016 1216 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 ZSCAN12O43309 604 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 STOX1Q6ZVD7 989 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 LINC00301Q8NCQ3 95 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 AGXT2Q9BYV1 514 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 MAP3K2Q9Y2U5 619 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 MRFAP1Q9Y605 127 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 UTYO14607 1347 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 SLC3A2P08195 630 aaKnown RBP15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 HMGB1P09429 215 aaKnown RBP15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 CASQ1P31415 396 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 TMEM139Q8IV31 216 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 RABGGTAQ92696 567 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 EDC3Q96F86 508 aaKnown RBP15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 UTP14AQ9BVJ6 771 aaKnown RBP15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 SIL1Q9H173 461 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms