RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 KLHL34Q8N239 644 aa18.33■□□□□ 0.52
UBAP1-201ENST00000297661 PAXBP1Q9Y5B6 917 aa18.33■□□□□ 0.52
UBAP1-201ENST00000297661 FPGT-TNNI3KV9GXZ4 949 aa18.33■□□□□ 0.52
UBAP1-201ENST00000297661 MED23Q9ULK4 1368 aa18.33■□□□□ 0.52
UBAP1-201ENST00000297661 RNF20Q5VTR2 975 aa18.32■□□□□ 0.52
UBAP1-201ENST00000297661 FAM200AQ8TCP9 573 aa18.32■□□□□ 0.52
UBAP1-201ENST00000297661 CKAP2LQ8IYA6 745 aa18.32■□□□□ 0.52
UBAP1-201ENST00000297661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.31■□□□□ 0.52
UBAP1-201ENST00000297661 RFX5P48382 616 aaPredicted RBP18.31■□□□□ 0.52
UBAP1-201ENST00000297661 LRP10Q7Z4F1 713 aa18.31■□□□□ 0.52
UBAP1-201ENST00000297661 DRC7Q8IY82 874 aa18.31■□□□□ 0.52
UBAP1-201ENST00000297661 TIGD1Q96MW7 591 aa18.31■□□□□ 0.52
UBAP1-201ENST00000297661 OVOS2A0A0G2JMS6 1433 aa18.31■□□□□ 0.52
UBAP1-201ENST00000297661 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
UBAP1-201ENST00000297661 SNRPA1P09661 255 aaKnown RBP18.3■□□□□ 0.52
UBAP1-201ENST00000297661 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
UBAP1-201ENST00000297661 SIPA1L3O60292 1781 aaPredicted RBP18.3■□□□□ 0.52
UBAP1-201ENST00000297661 HSP90B1P14625 803 aaKnown RBP18.3■□□□□ 0.52
UBAP1-201ENST00000297661 KRT85P78386 507 aa18.3■□□□□ 0.52
UBAP1-201ENST00000297661 DDB1Q16531 1140 aa18.3■□□□□ 0.52
UBAP1-201ENST00000297661 LMBR1LQ6UX01 489 aa18.3■□□□□ 0.52
UBAP1-201ENST00000297661 LUZP1Q86V48 1076 aa18.3■□□□□ 0.52
UBAP1-201ENST00000297661 NEUROD6Q96NK8 337 aa18.3■□□□□ 0.52
UBAP1-201ENST00000297661 A0A0G2JLW4 131 aa18.29■□□□□ 0.52
UBAP1-201ENST00000297661 ZSCAN25Q6NSZ9 544 aa18.29■□□□□ 0.52
UBAP1-201ENST00000297661 COPRSQ9NQ92 184 aa18.29■□□□□ 0.52
UBAP1-201ENST00000297661 ZNF609O15014 1411 aa18.29■□□□□ 0.52
UBAP1-201ENST00000297661 ERICH4A6NGS2 130 aa18.29■□□□□ 0.52
UBAP1-201ENST00000297661 EXOC5O00471 708 aa18.29■□□□□ 0.52
UBAP1-201ENST00000297661 CEBPZQ03701 1054 aaKnown RBP18.29■□□□□ 0.52
UBAP1-201ENST00000297661 TPD52L1Q16890 204 aaPredicted RBP18.29■□□□□ 0.52
UBAP1-201ENST00000297661 KMT5BQ4FZB7 885 aa18.29■□□□□ 0.52
UBAP1-201ENST00000297661 ATP5JP18859 108 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 CABP4P57796 275 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 Q6ZUG5 572 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 ZNF397Q8NF99 534 aaPredicted RBP18.28■□□□□ 0.52
UBAP1-201ENST00000297661 ZNF592Q92610 1267 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 SNRKQ9NRH2 765 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 ABCC6O95255 1503 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 CYP21A2P08686 494 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 TIMM10P62072 90 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 ZCRB1Q8TBF4 217 aaKnown RBP18.28■□□□□ 0.52
UBAP1-201ENST00000297661 DACT1Q9NYF0 836 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 MRVI1Q9Y6F6 885 aa18.28■□□□□ 0.52
UBAP1-201ENST00000297661 PLCD3Q8N3E9 789 aa18.27■□□□□ 0.52
UBAP1-201ENST00000297661 ACSBG1Q96GR2 724 aa18.27■□□□□ 0.52
UBAP1-201ENST00000297661 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
UBAP1-201ENST00000297661 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
UBAP1-201ENST00000297661 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.27■□□□□ 0.52
UBAP1-201ENST00000297661 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.51
UBAP1-201ENST00000297661 SPATA32Q96LK8 384 aa18.27■□□□□ 0.51
UBAP1-201ENST00000297661 GOLGA6L4A6NEF3 574 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 GOLIM4O00461 696 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 TYRO3Q06418 890 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 ANKRD1Q15327 319 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 MAP3K11Q16584 847 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 TTLL7Q6ZT98 887 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 BRF1Q92994 677 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 ZNF594Q96JF6 807 aaPredicted RBP18.26■□□□□ 0.51
UBAP1-201ENST00000297661 TRIM5Q9C035 493 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 CEP135Q66GS9 1140 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 BARGINQ6ZT62 677 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 STOX1Q6ZVD7 989 aa18.26■□□□□ 0.51
UBAP1-201ENST00000297661 MARCH10Q8NA82 808 aaPredicted RBP18.26■□□□□ 0.51
UBAP1-201ENST00000297661 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBAP1-201ENST00000297661 V9GYY5 206 aaPredicted RBP18.26■□□□□ 0.51
UBAP1-201ENST00000297661 ILDR2Q71H61 639 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 PTF1AQ7RTS3 328 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 NUP62CLQ9H1M0 184 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 ZNF215Q9UL58 517 aaPredicted RBP18.25■□□□□ 0.51
UBAP1-201ENST00000297661 NBPF26B4DH59 902 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 PDCP20941 246 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 NBPF14Q5TI25 921 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 NBPF10Q6P3W6 841 aaKnown RBP18.25■□□□□ 0.51
UBAP1-201ENST00000297661 CHST3Q7LGC8 479 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 NBPF15Q8N660 670 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 SYTL4Q96C24 671 aaPredicted RBP18.25■□□□□ 0.51
UBAP1-201ENST00000297661 DCAF5Q96JK2 942 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 ZBTB3Q9H5J0 574 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 CALCOCO1Q9P1Z2 691 aa18.25■□□□□ 0.51
UBAP1-201ENST00000297661 THRAP3Q9Y2W1 955 aaKnown RBP18.25■□□□□ 0.51
UBAP1-201ENST00000297661 ZNF75DP51815 510 aa18.24■□□□□ 0.51
UBAP1-201ENST00000297661 CACTINQ8WUQ7 758 aaKnown RBP18.24■□□□□ 0.51
UBAP1-201ENST00000297661 LEO1Q8WVC0 666 aaPredicted RBP18.24■□□□□ 0.51
UBAP1-201ENST00000297661 CBX8Q9HC52 389 aa18.24■□□□□ 0.51
UBAP1-201ENST00000297661 FAM53CQ9NYF3 392 aa18.24■□□□□ 0.51
UBAP1-201ENST00000297661 HMG20BQ9P0W2 317 aa18.24■□□□□ 0.51
UBAP1-201ENST00000297661 A1BGP04217 495 aa18.24■□□□□ 0.51
UBAP1-201ENST00000297661 PLA2G4DQ86XP0 818 aa18.24■□□□□ 0.51
UBAP1-201ENST00000297661 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
UBAP1-201ENST00000297661 FTOQ9C0B1 505 aaKnown RBP eCLIP18.24■□□□□ 0.51
UBAP1-201ENST00000297661 ZNF330Q9Y3S2 320 aaPredicted RBP18.24■□□□□ 0.51
UBAP1-201ENST00000297661 SLC20A2Q08357 652 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 RABL6Q3YEC7 729 aaPredicted RBP18.23■□□□□ 0.51
UBAP1-201ENST00000297661 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 ANO6Q4KMQ2 910 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 GTF3C6Q969F1 213 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 TNMDQ9H2S6 317 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 ST7Q9NRC1 585 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 DISP2A7MBM2 1401 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms