RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 COA1Q9GZY4 146 aa15.06■□□□□ 0
HMGB2-201ENST00000296503 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
HMGB2-201ENST00000296503 KLRK1P26718 216 aa15.06■□□□□ 0
HMGB2-201ENST00000296503 RFX5P48382 616 aaPredicted RBP15.06■□□□□ 0
HMGB2-201ENST00000296503 PTPN12Q05209 780 aaKnown RBP15.06■□□□□ 0
HMGB2-201ENST00000296503 PNMA8AQ86V59 439 aaPredicted RBP15.06■□□□□ 0
HMGB2-201ENST00000296503 EYA2O00167 538 aa15.05■□□□□ -0
HMGB2-201ENST00000296503 POTEIP0CG38 1075 aa15.05■□□□□ -0
HMGB2-201ENST00000296503 POTEJP0CG39 1038 aa15.05■□□□□ -0
HMGB2-201ENST00000296503 FSTL1Q12841 308 aa15.05■□□□□ -0
HMGB2-201ENST00000296503 FBXW7Q969H0 707 aa15.05■□□□□ -0
HMGB2-201ENST00000296503 SIL1Q9H173 461 aa15.05■□□□□ -0
HMGB2-201ENST00000296503 GPRC5DQ9NZD1 345 aa15.05■□□□□ -0
HMGB2-201ENST00000296503 CNOT7Q9UIV1 285 aaKnown RBP15.05■□□□□ -0
HMGB2-201ENST00000296503 SCN4AP35499 1836 aa15.05■□□□□ -0
HMGB2-201ENST00000296503 USP17L3A6NCW0 530 aa15.04■□□□□ -0
HMGB2-201ENST00000296503 USP17L4A6NCW7 530 aa15.04■□□□□ -0
HMGB2-201ENST00000296503 H7C1D1 291 aa15.04■□□□□ -0
HMGB2-201ENST00000296503 SRGAP3O43295 1099 aa15.04■□□□□ -0
HMGB2-201ENST00000296503 VIL1P09327 827 aaKnown RBP15.04■□□□□ -0
HMGB2-201ENST00000296503 UBE4AQ14139 1066 aa15.04■□□□□ -0
HMGB2-201ENST00000296503 USP17L1Q7RTZ2 530 aa15.04■□□□□ -0
HMGB2-201ENST00000296503 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.04■□□□□ -0
HMGB2-201ENST00000296503 ZBTB7BO15156 539 aaPredicted RBP15.03■□□□□ -0
HMGB2-201ENST00000296503 CHADLQ6NUI6 762 aa15.03■□□□□ -0
HMGB2-201ENST00000296503 ZNF804AQ7Z570 1209 aa15.03■□□□□ -0
HMGB2-201ENST00000296503 DPF2Q92785 391 aa15.03■□□□□ -0
HMGB2-201ENST00000296503 PDE8BO95263 885 aa15.03■□□□□ -0
HMGB2-201ENST00000296503 RPS12P25398 132 aaKnown RBP15.03■□□□□ -0
HMGB2-201ENST00000296503 C15orf52Q6ZUT6 534 aaKnown RBP15.03■□□□□ -0
HMGB2-201ENST00000296503 LDHDQ86WU2 507 aa15.03■□□□□ -0
HMGB2-201ENST00000296503 CD209Q9NNX6 404 aa15.03■□□□□ -0
HMGB2-201ENST00000296503 ADARB2Q9NS39 739 aaKnown RBP15.03■□□□□ -0
HMGB2-201ENST00000296503 PA2G4Q9UQ80 394 aaKnown RBP15.03■□□□□ -0
HMGB2-201ENST00000296503 TTLL5Q6EMB2 1281 aa15.02■□□□□ -0
HMGB2-201ENST00000296503 RSBN1LQ6PCB5 846 aaPredicted RBP15.02■□□□□ -0
HMGB2-201ENST00000296503 USP50Q70EL3 339 aaPredicted RBP15.02■□□□□ -0
HMGB2-201ENST00000296503 MICALL2Q8IY33 904 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 C1orf115Q9H7X2 142 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 COPRSQ9NQ92 184 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 CEP126Q9P2H0 1117 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 FBXO3Q9UK99 471 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 HSPA6P17066 643 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 HIBADHP31937 336 aaKnown RBP15.01□□□□□ -0.01
HMGB2-201ENST00000296503 GTF2IP78347 998 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 MTX1Q13505 466 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 RBM26Q5T8P6 1007 aaKnown RBP15.01□□□□□ -0.01
HMGB2-201ENST00000296503 ATG9AQ7Z3C6 839 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 VPS37DQ86XT2 251 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 AGBL3Q8NEM8 1001 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 COG6Q9Y2V7 657 aa15.01□□□□□ -0.01
HMGB2-201ENST00000296503 SHTN1A0MZ66 631 aa15□□□□□ -0.01
HMGB2-201ENST00000296503 CIAO1O76071 339 aa15□□□□□ -0.01
HMGB2-201ENST00000296503 IL15P40933 162 aaPredicted RBP15□□□□□ -0.01
HMGB2-201ENST00000296503 GYG1P46976 350 aa15□□□□□ -0.01
HMGB2-201ENST00000296503 STRIP1Q5VSL9 837 aa15□□□□□ -0.01
HMGB2-201ENST00000296503 IRS2Q9Y4H2 1338 aa15□□□□□ -0.01
HMGB2-201ENST00000296503 SCN9AQ15858 1988 aa15□□□□□ -0.01
HMGB2-201ENST00000296503 PNMA6EA0A0J9YXQ4 647 aa14.99□□□□□ -0.01
HMGB2-201ENST00000296503 IFIT1P09914 478 aaKnown RBP14.99□□□□□ -0.01
HMGB2-201ENST00000296503 ATP8B2P98198 1209 aa14.99□□□□□ -0.01
HMGB2-201ENST00000296503 CAVIN4Q5BKX8 364 aa14.99□□□□□ -0.01
HMGB2-201ENST00000296503 VGLL2Q8N8G2 317 aa14.99□□□□□ -0.01
HMGB2-201ENST00000296503 FAM84BQ96KN1 310 aaPredicted RBP14.99□□□□□ -0.01
HMGB2-201ENST00000296503 MXD3Q9BW11 206 aa14.99□□□□□ -0.01
HMGB2-201ENST00000296503 MVPQ14764 893 aaKnown RBP14.99□□□□□ -0.01
HMGB2-201ENST00000296503 PUM3Q15397 648 aaKnown RBP14.99□□□□□ -0.01
HMGB2-201ENST00000296503 TBC1D10BQ4KMP7 808 aaPredicted RBP14.99□□□□□ -0.01
HMGB2-201ENST00000296503 DACT2Q5SW24 774 aa14.99□□□□□ -0.01
HMGB2-201ENST00000296503 MAP1SQ66K74 1059 aaPredicted RBP14.99□□□□□ -0.01
HMGB2-201ENST00000296503 SAMD7Q7Z3H4 446 aa14.99□□□□□ -0.01
HMGB2-201ENST00000296503 DDX19BQ9UMR2 479 aa14.99□□□□□ -0.01
HMGB2-201ENST00000296503 FRAT2O75474 233 aaPredicted RBP14.98□□□□□ -0.01
HMGB2-201ENST00000296503 USP17L8P0C7I0 530 aa14.98□□□□□ -0.01
HMGB2-201ENST00000296503 IL1R1P14778 569 aa14.98□□□□□ -0.01
HMGB2-201ENST00000296503 G3BP1Q13283 466 aaKnown RBP eCLIP14.98□□□□□ -0.01
HMGB2-201ENST00000296503 CNTROBQ8N137 903 aa14.98□□□□□ -0.01
HMGB2-201ENST00000296503 SLC5A1P13866 664 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 HIRAP54198 1017 aaPredicted RBP14.97□□□□□ -0.01
HMGB2-201ENST00000296503 PDE3AQ14432 1141 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 TRPM4Q8TD43 1214 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 LPIN2Q92539 896 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 CHMP4BQ9H444 224 aaKnown RBP14.97□□□□□ -0.01
HMGB2-201ENST00000296503 MYO3BQ8WXR4 1341 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 SASH1O94885 1247 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 FGFR2P21802 821 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 C20orf194Q5TEA3 1177 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 FBXO33Q7Z6M2 555 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 OGFOD1Q8N543 542 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 GMLQ99445 158 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 JAG2Q9Y219 1238 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 A0A1B0GUL6 1792 aa14.97□□□□□ -0.01
HMGB2-201ENST00000296503 BCAMP50895 628 aa14.96□□□□□ -0.01
HMGB2-201ENST00000296503 APLP1P51693 650 aa14.96□□□□□ -0.01
HMGB2-201ENST00000296503 ATP2B3Q16720 1220 aa14.96□□□□□ -0.01
HMGB2-201ENST00000296503 TDRD7Q8NHU6 1098 aaKnown RBP14.96□□□□□ -0.01
HMGB2-201ENST00000296503 IQSEC3Q9UPP2 1182 aaPredicted RBP14.96□□□□□ -0.01
HMGB2-201ENST00000296503 TFCP2Q12800 502 aa14.95□□□□□ -0.02
HMGB2-201ENST00000296503 OS9Q13438 667 aaPredicted RBP14.95□□□□□ -0.02
HMGB2-201ENST00000296503 KIAA0825Q8IV33 1275 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms