RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 HSP90B2PQ58FF3 399 aa11.96□□□□□ -0.49
ARHGEF3-201ENST00000296315 CC2D1AQ6P1N0 951 aaPredicted RBP11.96□□□□□ -0.49
ARHGEF3-201ENST00000296315 DHX58Q96C10 678 aa11.96□□□□□ -0.49
ARHGEF3-201ENST00000296315 KIAA1468Q9P260 1216 aa11.96□□□□□ -0.49
ARHGEF3-201ENST00000296315 EDC4Q6P2E9 1401 aaKnown RBP11.96□□□□□ -0.49
ARHGEF3-201ENST00000296315 LOC102724159A0A0B4J2E5 919 aa11.96□□□□□ -0.5
ARHGEF3-201ENST00000296315 CYP21A2P08686 494 aa11.96□□□□□ -0.5
ARHGEF3-201ENST00000296315 PWP2Q15269 919 aaKnown RBP11.96□□□□□ -0.5
ARHGEF3-201ENST00000296315 ZNF827Q17R98 1081 aa11.96□□□□□ -0.5
ARHGEF3-201ENST00000296315 TBC1D8O95759 1140 aa11.96□□□□□ -0.5
ARHGEF3-201ENST00000296315 POLA2Q14181 598 aa11.96□□□□□ -0.5
ARHGEF3-201ENST00000296315 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.5
ARHGEF3-201ENST00000296315 SUCLG2Q96I99 432 aa11.96□□□□□ -0.5
ARHGEF3-201ENST00000296315 C8orf76Q96K31 380 aa11.96□□□□□ -0.5
ARHGEF3-201ENST00000296315 PRR36Q9H6K5 1346 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 BTBD11A6QL63 1104 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 TULP2O00295 520 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 TADA3O75528 432 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 SASH1O94885 1247 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 ZNF202O95125 648 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 PNOCQ13519 176 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 LRRFIP1Q32MZ4 808 aaKnown RBP11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 FKBP15Q5T1M5 1219 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 BEND3Q5T5X7 828 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 JAKMIP3Q5VZ66 844 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 FAN1Q9Y2M0 1017 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 ZC3H13Q5T200 1668 aaKnown RBP11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 ATP7BP35670 1465 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 H3BQF6 201 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 GOLIM4O00461 696 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 LONRF2Q1L5Z9 754 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 OLFM4Q6UX06 510 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 CRB1P82279 1406 aa11.95□□□□□ -0.5
ARHGEF3-201ENST00000296315 PES1O00541 588 aaKnown RBP11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 DHX16O60231 1041 aaKnown RBP11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 TAF5LO75529 589 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 SNRKQ9NRH2 765 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 FANCLQ9NW38 375 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 MYO3AQ8NEV4 1616 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 COBLO75128 1261 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 AKAP17AQ02040 695 aaKnown RBP11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 RBM43Q6ZSC3 357 aaKnown RBP11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 NSUN7Q8NE18 718 aaKnown RBP11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 L2HGDHQ9H9P8 463 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 PPP2R2CQ9Y2T4 447 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 SPTLC2O15270 562 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 ZSCAN12O43309 604 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 KRT32Q14532 448 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 MTF1Q14872 753 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 WASHC4Q2M389 1173 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 TOGARAM2Q6ZUX3 1019 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 RCOR1Q9UKL0 485 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 PTPRMP28827 1452 aa11.94□□□□□ -0.5
ARHGEF3-201ENST00000296315 TTC31Q49AM3 519 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 NOM1Q5C9Z4 860 aaKnown RBP11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 CCDC85AQ96PX6 553 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 CDK12Q9NYV4 1490 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 STX17P56962 302 aa11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 TAF7LQ5H9L4 462 aa11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 NFATC2IPQ8NCF5 419 aa11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 CLIC6Q96NY7 704 aa11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 TSPOAP1O95153 1857 aa11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 CPS1P31327 1500 aa11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 WDHD1O75717 1129 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 MICALL1Q8N3F8 863 aa11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 BAG1Q99933 345 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 DBNDD2Q9BQY9 259 aa11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 ZNF330Q9Y3S2 320 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF3-201ENST00000296315 KIDINS220Q9ULH0 1771 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 EFCAB8A8MWE9 144 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 FANCGO15287 622 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 EPB41L2O43491 1005 aaKnown RBP11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 SYKP43405 635 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 ZNF530Q6P9A1 599 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 GOLGA1Q92805 767 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 AIFM3Q96NN9 605 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 PARP3Q9Y6F1 533 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 ATP5J2-PTCD1G3V325 749 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 CCP110O43303 1012 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 PTCD1O75127 700 aaKnown RBP11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 ZRANB2O95218 330 aaKnown RBP eCLIP11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 DNAJC21Q5F1R6 531 aaKnown RBP11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 STOX1Q6ZVD7 989 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 ABTB2Q8N961 1025 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 A0A0U1RQJ8 604 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 GOLGA8BA8MQT2 603 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 FKBP4Q02790 459 aaKnown RBP eCLIP11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 TFCP2Q12800 502 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 DHX8Q14562 1220 aaKnown RBP11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 CCDC158Q5M9N0 1113 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 ZNF569Q5MCW4 686 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 ATRIPQ8WXE1 791 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 OSBPL5Q9H0X9 879 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 IMPACTQ9P2X3 320 aa11.92□□□□□ -0.5
ARHGEF3-201ENST00000296315 PFKFB1P16118 471 aa11.91□□□□□ -0.5
ARHGEF3-201ENST00000296315 RGS22Q8NE09 1264 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms