RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 MYO3BQ8WXR4 1341 aa13.57□□□□□ -0.24
RFC4-201ENST00000296273 MED23Q9ULK4 1368 aa13.57□□□□□ -0.24
RFC4-201ENST00000296273 SOX10P56693 466 aa13.57□□□□□ -0.24
RFC4-201ENST00000296273 HNRNPUQ00839 825 aaKnown RBP eCLIP13.57□□□□□ -0.24
RFC4-201ENST00000296273 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
RFC4-201ENST00000296273 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
RFC4-201ENST00000296273 NF2P35240 595 aa13.56□□□□□ -0.24
RFC4-201ENST00000296273 NOM1Q5C9Z4 860 aaKnown RBP13.56□□□□□ -0.24
RFC4-201ENST00000296273 CCDC30Q5VVM6 783 aa13.56□□□□□ -0.24
RFC4-201ENST00000296273 BSDC1Q9NW68 430 aaPredicted RBP13.56□□□□□ -0.24
RFC4-201ENST00000296273 HDAC9Q9UKV0 1011 aa13.56□□□□□ -0.24
RFC4-201ENST00000296273 ZBED9Q6R2W3 1325 aa13.55□□□□□ -0.24
RFC4-201ENST00000296273 CTSWP56202 376 aa13.55□□□□□ -0.24
RFC4-201ENST00000296273 CCDC85AQ96PX6 553 aaPredicted RBP13.55□□□□□ -0.24
RFC4-201ENST00000296273 ELL2O00472 640 aaPredicted RBP13.54□□□□□ -0.24
RFC4-201ENST00000296273 TM4SF4P48230 202 aa13.54□□□□□ -0.24
RFC4-201ENST00000296273 NEXNQ0ZGT2 675 aa13.54□□□□□ -0.24
RFC4-201ENST00000296273 STRIP1Q5VSL9 837 aa13.54□□□□□ -0.24
RFC4-201ENST00000296273 COA1Q9GZY4 146 aa13.54□□□□□ -0.24
RFC4-201ENST00000296273 MINPP1Q9UNW1 487 aa13.54□□□□□ -0.24
RFC4-201ENST00000296273 HPS5Q9UPZ3 1129 aa13.54□□□□□ -0.24
RFC4-201ENST00000296273 WNT10BO00744 389 aa13.53□□□□□ -0.24
RFC4-201ENST00000296273 NEFLP07196 543 aa13.53□□□□□ -0.24
RFC4-201ENST00000296273 CCT4P50991 539 aaKnown RBP13.53□□□□□ -0.24
RFC4-201ENST00000296273 SREBF2Q12772 1141 aa13.53□□□□□ -0.24
RFC4-201ENST00000296273 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
RFC4-201ENST00000296273 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
RFC4-201ENST00000296273 DACT2Q5SW24 774 aa13.53□□□□□ -0.24
RFC4-201ENST00000296273 PRPF38BQ5VTL8 546 aaKnown RBP13.53□□□□□ -0.24
RFC4-201ENST00000296273 KSR2Q6VAB6 950 aa13.53□□□□□ -0.24
RFC4-201ENST00000296273 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
RFC4-201ENST00000296273 ZNF296Q8WUU4 475 aaPredicted RBP13.53□□□□□ -0.24
RFC4-201ENST00000296273 MAP3K2Q9Y2U5 619 aa13.53□□□□□ -0.24
RFC4-201ENST00000296273 LEMD3Q9Y2U8 911 aa13.53□□□□□ -0.24
RFC4-201ENST00000296273 TNRC18O15417 2968 aaPredicted RBP13.52□□□□□ -0.24
RFC4-201ENST00000296273 UBE2Q2LH0YL09 131 aa13.52□□□□□ -0.25
RFC4-201ENST00000296273 APAF1O14727 1248 aa13.52□□□□□ -0.25
RFC4-201ENST00000296273 C8orf58Q8NAV2 365 aa13.52□□□□□ -0.25
RFC4-201ENST00000296273 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.25
RFC4-201ENST00000296273 CFHR5Q9BXR6 569 aa13.52□□□□□ -0.25
RFC4-201ENST00000296273 PI4KAP2A4QPH2 592 aa13.51□□□□□ -0.25
RFC4-201ENST00000296273 GPR25O00155 361 aa13.51□□□□□ -0.25
RFC4-201ENST00000296273 TBC1D8O95759 1140 aa13.51□□□□□ -0.25
RFC4-201ENST00000296273 IGHMBP2P38935 993 aaKnown RBP13.51□□□□□ -0.25
RFC4-201ENST00000296273 MOB2Q70IA6 237 aa13.51□□□□□ -0.25
RFC4-201ENST00000296273 ARMC9Q7Z3E5 817 aa13.51□□□□□ -0.25
RFC4-201ENST00000296273 APOBEC3FQ8IUX4 373 aaKnown RBP13.51□□□□□ -0.25
RFC4-201ENST00000296273 FAM9BQ8IZU0 186 aa13.51□□□□□ -0.25
RFC4-201ENST00000296273 PI4KAP1Q8N8J0 262 aa13.51□□□□□ -0.25
RFC4-201ENST00000296273 GREM2Q9H772 168 aa13.51□□□□□ -0.25
RFC4-201ENST00000296273 IGKV5-2P06315 115 aa13.5□□□□□ -0.25
RFC4-201ENST00000296273 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
RFC4-201ENST00000296273 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
RFC4-201ENST00000296273 TTLL5Q6EMB2 1281 aa13.5□□□□□ -0.25
RFC4-201ENST00000296273 FBXO46Q6PJ61 603 aaPredicted RBP13.5□□□□□ -0.25
RFC4-201ENST00000296273 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
RFC4-201ENST00000296273 STK31Q9BXU1 1019 aa13.5□□□□□ -0.25
RFC4-201ENST00000296273 ANKRD2Q9GZV1 360 aa13.5□□□□□ -0.25
RFC4-201ENST00000296273 SCAF8Q9UPN6 1271 aaKnown RBP13.5□□□□□ -0.25
RFC4-201ENST00000296273 COL1A1P02452 1464 aaPredicted RBP13.5□□□□□ -0.25
RFC4-201ENST00000296273 ALDH1A1P00352 501 aa13.49□□□□□ -0.25
RFC4-201ENST00000296273 MYH3P11055 1940 aa13.49□□□□□ -0.25
RFC4-201ENST00000296273 WTIPA6NIX2 430 aaPredicted RBP13.48□□□□□ -0.25
RFC4-201ENST00000296273 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
RFC4-201ENST00000296273 FKTNO75072 461 aa13.48□□□□□ -0.25
RFC4-201ENST00000296273 INHBEP58166 350 aa13.48□□□□□ -0.25
RFC4-201ENST00000296273 CCDC184Q52MB2 194 aa13.48□□□□□ -0.25
RFC4-201ENST00000296273 MPHOSPH8Q99549 860 aa13.48□□□□□ -0.25
RFC4-201ENST00000296273 MXD3Q9BW11 206 aa13.48□□□□□ -0.25
RFC4-201ENST00000296273 PLA2G12BQ9BX93 195 aa13.48□□□□□ -0.25
RFC4-201ENST00000296273 ZNF804BA4D1E1 1349 aa13.48□□□□□ -0.25
RFC4-201ENST00000296273 ZNF646O15015 1829 aaPredicted RBP13.47□□□□□ -0.25
RFC4-201ENST00000296273 H7C1W4 665 aa13.47□□□□□ -0.25
RFC4-201ENST00000296273 SASH1O94885 1247 aa13.47□□□□□ -0.25
RFC4-201ENST00000296273 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
RFC4-201ENST00000296273 PTPN12Q05209 780 aaKnown RBP13.47□□□□□ -0.25
RFC4-201ENST00000296273 CWF19L2Q2TBE0 894 aaKnown RBP13.47□□□□□ -0.25
RFC4-201ENST00000296273 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
RFC4-201ENST00000296273 KIAA0825Q8IV33 1275 aa13.47□□□□□ -0.25
RFC4-201ENST00000296273 MANSC4A6NHS7 340 aaPredicted RBP13.46□□□□□ -0.25
RFC4-201ENST00000296273 UNCXA6NJT0 531 aa13.46□□□□□ -0.25
RFC4-201ENST00000296273 ITGA6P23229 1130 aa13.46□□□□□ -0.25
RFC4-201ENST00000296273 MKRN3Q13064 507 aaKnown RBP13.46□□□□□ -0.25
RFC4-201ENST00000296273 SPRYD7Q5W111 196 aa13.46□□□□□ -0.25
RFC4-201ENST00000296273 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
RFC4-201ENST00000296273 TXNRD3Q86VQ6 643 aa13.46□□□□□ -0.25
RFC4-201ENST00000296273 TSPYL6Q8N831 410 aa13.46□□□□□ -0.25
RFC4-201ENST00000296273 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.25
RFC4-201ENST00000296273 MYH16Q9H6N6 1097 aa13.46□□□□□ -0.25
RFC4-201ENST00000296273 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
RFC4-201ENST00000296273 PPP2R3BQ9Y5P8 575 aa13.46□□□□□ -0.25
RFC4-201ENST00000296273 SPEF2Q9C093 1822 aa13.46□□□□□ -0.26
RFC4-201ENST00000296273 ZBTB48P10074 688 aaPredicted RBP13.45□□□□□ -0.26
RFC4-201ENST00000296273 KCNJ4P48050 445 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 GTF2IP78347 998 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 MAP3K11Q16584 847 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 MTMR14Q8NCE2 650 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 ANGEL1Q9UNK9 670 aaKnown RBP13.45□□□□□ -0.26
RFC4-201ENST00000296273 MYO1BO43795 1136 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms