RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TAF4BQ92750 862 aa20.35■□□□□ 0.85
CDC42EP3-201ENST00000295324 SAMD9LQ8IVG5 1584 aa20.35■□□□□ 0.85
CDC42EP3-201ENST00000295324 Q6ZUG5 572 aa20.35■□□□□ 0.85
CDC42EP3-201ENST00000295324 RRP36Q96EU6 259 aaKnown RBP20.35■□□□□ 0.85
CDC42EP3-201ENST00000295324 PLS1Q14651 629 aa20.35■□□□□ 0.85
CDC42EP3-201ENST00000295324 RLBP1P12271 317 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 TIMM10P62072 90 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 CCDC102BQ68D86 513 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 SYCP3Q8IZU3 236 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 VTI1AQ96AJ9 217 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 PPFIA3O75145 1194 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 ARHGAP29Q52LW3 1261 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 HOOK2Q96ED9 719 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 TCEANC2Q96MN5 208 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 CCDC171Q6TFL3 1326 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 SPDYE3A6NKU9 549 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 GCKRQ14397 625 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 TBC1D32Q96NH3 1257 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 ADGBQ8N7X0 1667 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 SPA17Q15506 151 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 CARD10Q9BWT7 1032 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 HELLSQ9NRZ9 838 aa20.34■□□□□ 0.85
CDC42EP3-201ENST00000295324 MBD4O95243 580 aa20.33■□□□□ 0.85
CDC42EP3-201ENST00000295324 SSFA2P28290 1259 aa20.33■□□□□ 0.85
CDC42EP3-201ENST00000295324 LPIN2Q92539 896 aa20.33■□□□□ 0.85
CDC42EP3-201ENST00000295324 TRIM35Q9UPQ4 493 aa20.33■□□□□ 0.85
CDC42EP3-201ENST00000295324 TNNI3KQ59H18 835 aa20.33■□□□□ 0.84
CDC42EP3-201ENST00000295324 TMX3Q96JJ7 454 aa20.33■□□□□ 0.84
CDC42EP3-201ENST00000295324 TNNQ9UQP3 1299 aa20.33■□□□□ 0.84
CDC42EP3-201ENST00000295324 FPGT-TNNI3KV9GXZ4 949 aa20.33■□□□□ 0.84
CDC42EP3-201ENST00000295324 USP19O94966 1318 aa20.33■□□□□ 0.84
CDC42EP3-201ENST00000295324 NECAB1Q8N987 351 aa20.33■□□□□ 0.84
CDC42EP3-201ENST00000295324 SPDYE4A6NLX3 237 aa20.32■□□□□ 0.84
CDC42EP3-201ENST00000295324 TCIRG1Q13488 830 aa20.32■□□□□ 0.84
CDC42EP3-201ENST00000295324 JAKMIP3Q5VZ66 844 aa20.32■□□□□ 0.84
CDC42EP3-201ENST00000295324 IQCEQ6IPM2 695 aa20.32■□□□□ 0.84
CDC42EP3-201ENST00000295324 PANK2Q9BZ23 570 aa20.32■□□□□ 0.84
CDC42EP3-201ENST00000295324 CCDC40Q4G0X9 1142 aa20.32■□□□□ 0.84
CDC42EP3-201ENST00000295324 SMC5Q8IY18 1101 aa20.32■□□□□ 0.84
CDC42EP3-201ENST00000295324 ZBTB7BO15156 539 aaPredicted RBP20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 SFPQP23246 707 aaKnown RBP eCLIP20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 FAM177A1Q8N128 213 aaPredicted RBP20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 MTIF2P46199 727 aaKnown RBP20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 XAGE2Q96GT9 111 aa20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 KIAA0232Q92628 1395 aa20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 TCERG1LQ5VWI1 586 aa20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 ERBB4Q15303 1308 aa20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 MROH5Q6ZUA9 1318 aa20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 PICK1Q9NRD5 415 aa20.31■□□□□ 0.84
CDC42EP3-201ENST00000295324 NIM1KQ8IY84 436 aa20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 FAM114A1Q8IWE2 563 aa20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 CHD1O14646 1710 aa20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 RXRBP28702 533 aa20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 GNA11P29992 359 aa20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 FAM196AQ6ZSG2 479 aa20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 TSPOAP1O95153 1857 aa20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 MPNDQ8N594 471 aa20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 DHX32Q7L7V1 743 aaKnown RBP20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 TBC1D22AQ8WUA7 517 aa20.3■□□□□ 0.84
CDC42EP3-201ENST00000295324 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
CDC42EP3-201ENST00000295324 ARHGEF25Q86VW2 580 aa20.29■□□□□ 0.84
CDC42EP3-201ENST00000295324 HECW2Q9P2P5 1572 aa20.29■□□□□ 0.84
CDC42EP3-201ENST00000295324 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
CDC42EP3-201ENST00000295324 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
CDC42EP3-201ENST00000295324 RMND1Q9NWS8 449 aa20.29■□□□□ 0.84
CDC42EP3-201ENST00000295324 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
CDC42EP3-201ENST00000295324 DBNDD2Q9BQY9 259 aa20.29■□□□□ 0.84
CDC42EP3-201ENST00000295324 TOP1P11387 765 aaKnown RBP20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 CREB3L3Q68CJ9 461 aa20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 BICD1Q96G01 975 aa20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 ZNF594Q96JF6 807 aaPredicted RBP20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 NEFHP12036 1026 aa20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 NLGN1Q8N2Q7 840 aa20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 TNPO1Q92973 898 aaKnown RBP20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 CCDC174Q6PII3 467 aa20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 PLEKHM2Q8IWE5 1019 aa20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 SUCLG2Q96I99 432 aa20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 ZCCHC11Q5TAX3 1644 aaKnown RBP20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 USP37Q86T82 979 aa20.28■□□□□ 0.84
CDC42EP3-201ENST00000295324 FAM135BQ49AJ0 1406 aa20.27■□□□□ 0.84
CDC42EP3-201ENST00000295324 ZSCAN22P10073 491 aaPredicted RBP20.27■□□□□ 0.84
CDC42EP3-201ENST00000295324 EXOC1Q9NV70 894 aa20.27■□□□□ 0.84
CDC42EP3-201ENST00000295324 PRKCSHP14314 528 aaPredicted RBP20.27■□□□□ 0.84
CDC42EP3-201ENST00000295324 ARHGEF10LQ9HCE6 1279 aa20.27■□□□□ 0.84
CDC42EP3-201ENST00000295324 IL17REQ8NFR9 667 aa20.27■□□□□ 0.83
CDC42EP3-201ENST00000295324 APPBP2Q92624 585 aa20.27■□□□□ 0.83
CDC42EP3-201ENST00000295324 TRIM75PA6NK02 468 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 TAF5LO75529 589 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 SKIDA1Q1XH10 827 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 CCDC112Q8NEF3 446 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 RBM28Q9NW13 759 aaKnown RBP20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 TMOD4Q9NZQ9 345 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 LOC102724428A0A0B4J2F2 783 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 PARP1P09874 1014 aaKnown RBP20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 SIK1P57059 783 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 RAB3GAP1Q15042 981 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 DRC1Q96MC2 740 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 CHMLP26374 656 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms