RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 PDE1AP54750 535 aa21.79■■□□□ 1.08
CCDC78-201ENST00000293889 UBE4AQ14139 1066 aa21.79■■□□□ 1.08
CCDC78-201ENST00000293889 XAGE2Q96GT9 111 aa21.79■■□□□ 1.08
CCDC78-201ENST00000293889 STAP2Q9UGK3 403 aa21.79■■□□□ 1.08
CCDC78-201ENST00000293889 SLC5A1P13866 664 aa21.78■■□□□ 1.08
CCDC78-201ENST00000293889 KCNJ4P48050 445 aa21.78■■□□□ 1.08
CCDC78-201ENST00000293889 TSHZ3Q63HK5 1081 aa21.78■■□□□ 1.08
CCDC78-201ENST00000293889 ARHGAP27Q6ZUM4 889 aa21.78■■□□□ 1.08
CCDC78-201ENST00000293889 PODXL2Q9NZ53 605 aa21.78■■□□□ 1.08
CCDC78-201ENST00000293889 ZNF804BA4D1E1 1349 aa21.77■■□□□ 1.08
CCDC78-201ENST00000293889 TMX4Q9H1E5 349 aaPredicted RBP21.77■■□□□ 1.08
CCDC78-201ENST00000293889 LEMD3Q9Y2U8 911 aa21.77■■□□□ 1.08
CCDC78-201ENST00000293889 NFKBIEO00221 500 aa21.77■■□□□ 1.07
CCDC78-201ENST00000293889 IFIT1P09914 478 aaKnown RBP21.77■■□□□ 1.07
CCDC78-201ENST00000293889 LTBP1Q14766 1721 aa21.76■■□□□ 1.07
CCDC78-201ENST00000293889 CCDC93Q567U6 631 aa21.76■■□□□ 1.07
CCDC78-201ENST00000293889 MPNDQ8N594 471 aa21.76■■□□□ 1.07
CCDC78-201ENST00000293889 OSBPL3Q9H4L5 887 aa21.76■■□□□ 1.07
CCDC78-201ENST00000293889 ECHDC1Q9NTX5 307 aa21.76■■□□□ 1.07
CCDC78-201ENST00000293889 GGA1Q9UJY5 639 aa21.76■■□□□ 1.07
CCDC78-201ENST00000293889 ATP2B4P23634 1241 aa21.75■■□□□ 1.07
CCDC78-201ENST00000293889 RASSF7Q02833 373 aa21.75■■□□□ 1.07
CCDC78-201ENST00000293889 GORABQ5T7V8 394 aa21.75■■□□□ 1.07
CCDC78-201ENST00000293889 SOGA3Q5TF21 947 aa21.75■■□□□ 1.07
CCDC78-201ENST00000293889 TBC1D16Q8TBP0 767 aa21.75■■□□□ 1.07
CCDC78-201ENST00000293889 GPATCH3Q96I76 525 aa21.75■■□□□ 1.07
CCDC78-201ENST00000293889 POLLQ9UGP5 575 aa21.75■■□□□ 1.07
CCDC78-201ENST00000293889 TTC41PQ6P2S7 1318 aa21.74■■□□□ 1.07
CCDC78-201ENST00000293889 UFL1O94874 794 aa21.74■■□□□ 1.07
CCDC78-201ENST00000293889 KLRK1P26718 216 aa21.74■■□□□ 1.07
CCDC78-201ENST00000293889 CC2D2BQ6DHV5 1058 aa21.74■■□□□ 1.07
CCDC78-201ENST00000293889 DPP8Q6V1X1 898 aaPredicted RBP21.74■■□□□ 1.07
CCDC78-201ENST00000293889 PRELPP51888 382 aa21.73■■□□□ 1.07
CCDC78-201ENST00000293889 ERICH6Q7L0X2 663 aa21.73■■□□□ 1.07
CCDC78-201ENST00000293889 PI4K2BQ8TCG2 481 aa21.73■■□□□ 1.07
CCDC78-201ENST00000293889 ARAP2Q8WZ64 1704 aa21.73■■□□□ 1.07
CCDC78-201ENST00000293889 AOX1Q06278 1338 aa21.73■■□□□ 1.07
CCDC78-201ENST00000293889 IRS2Q9Y4H2 1338 aa21.73■■□□□ 1.07
CCDC78-201ENST00000293889 DUOX1Q9NRD9 1551 aa21.73■■□□□ 1.07
CCDC78-201ENST00000293889 GPR101Q96P66 508 aaPredicted RBP21.73■■□□□ 1.07
CCDC78-201ENST00000293889 C6orf229H3BNL8 230 aa21.72■■□□□ 1.07
CCDC78-201ENST00000293889 CCDC158Q5M9N0 1113 aa21.72■■□□□ 1.07
CCDC78-201ENST00000293889 TXNRD3Q86VQ6 643 aa21.72■■□□□ 1.07
CCDC78-201ENST00000293889 RTKN2Q8IZC4 609 aa21.72■■□□□ 1.07
CCDC78-201ENST00000293889 DICER1Q9UPY3 1922 aaKnown RBP21.72■■□□□ 1.07
CCDC78-201ENST00000293889 ATP5JP18859 108 aa21.71■■□□□ 1.07
CCDC78-201ENST00000293889 PHKA1P46020 1223 aa21.71■■□□□ 1.07
CCDC78-201ENST00000293889 GYG1P46976 350 aa21.71■■□□□ 1.07
CCDC78-201ENST00000293889 BCAMP50895 628 aa21.71■■□□□ 1.07
CCDC78-201ENST00000293889 TTC22Q5TAA0 569 aa21.71■■□□□ 1.07
CCDC78-201ENST00000293889 CCDC102BQ68D86 513 aa21.71■■□□□ 1.07
CCDC78-201ENST00000293889 FAM84BQ96KN1 310 aaPredicted RBP21.71■■□□□ 1.07
CCDC78-201ENST00000293889 LTBP3Q9NS15 1303 aa21.71■■□□□ 1.07
CCDC78-201ENST00000293889 ERC2O15083 957 aa21.7■■□□□ 1.06
CCDC78-201ENST00000293889 GLRX3O76003 335 aaKnown RBP21.7■■□□□ 1.06
CCDC78-201ENST00000293889 TTC39AQ5SRH9 613 aa21.7■■□□□ 1.06
CCDC78-201ENST00000293889 C15orf52Q6ZUT6 534 aaKnown RBP21.7■■□□□ 1.06
CCDC78-201ENST00000293889 TAOK3Q9H2K8 898 aa21.7■■□□□ 1.06
CCDC78-201ENST00000293889 GSPT1P15170 499 aaKnown RBP21.69■■□□□ 1.06
CCDC78-201ENST00000293889 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.06
CCDC78-201ENST00000293889 GRIPAP1Q4V328 841 aa21.69■■□□□ 1.06
CCDC78-201ENST00000293889 FBXO33Q7Z6M2 555 aa21.69■■□□□ 1.06
CCDC78-201ENST00000293889 RTFDC1Q9BY42 306 aaPredicted RBP21.69■■□□□ 1.06
CCDC78-201ENST00000293889 CAVIN4Q5BKX8 364 aa21.69■■□□□ 1.06
CCDC78-201ENST00000293889 BOLA2Q9H3K6 86 aa21.69■■□□□ 1.06
CCDC78-201ENST00000293889 ZNF512BQ96KM6 892 aaPredicted RBP21.68■■□□□ 1.06
CCDC78-201ENST00000293889 PSMD1Q99460 953 aa21.68■■□□□ 1.06
CCDC78-201ENST00000293889 MED23Q9ULK4 1368 aa21.67■■□□□ 1.06
CCDC78-201ENST00000293889 TIAM2Q8IVF5 1701 aa21.67■■□□□ 1.06
CCDC78-201ENST00000293889 ARID4AP29374 1257 aaPredicted RBP21.67■■□□□ 1.06
CCDC78-201ENST00000293889 HIBADHP31937 336 aaKnown RBP21.67■■□□□ 1.06
CCDC78-201ENST00000293889 SCARF1Q14162 830 aa21.67■■□□□ 1.06
CCDC78-201ENST00000293889 VPS37DQ86XT2 251 aa21.67■■□□□ 1.06
CCDC78-201ENST00000293889 IPO9Q96P70 1041 aaKnown RBP21.67■■□□□ 1.06
CCDC78-201ENST00000293889 ZNF277Q9NRM2 450 aaPredicted RBP21.67■■□□□ 1.06
CCDC78-201ENST00000293889 UQCRFS1P1P0C7P4 283 aa21.66■■□□□ 1.06
CCDC78-201ENST00000293889 ANP32AP39687 249 aaKnown RBP21.66■■□□□ 1.06
CCDC78-201ENST00000293889 BMP2KLQ5H9B9 411 aa21.66■■□□□ 1.06
CCDC78-201ENST00000293889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCDC78-201ENST00000293889 COL4A5P29400 1685 aa21.66■■□□□ 1.06
CCDC78-201ENST00000293889 RIMBP2O15034 1052 aa21.66■■□□□ 1.06
CCDC78-201ENST00000293889 MAP4K4O95819 1239 aaPredicted RBP21.66■■□□□ 1.06
CCDC78-201ENST00000293889 LMNB1P20700 586 aa21.66■■□□□ 1.06
CCDC78-201ENST00000293889 WASHC4Q2M389 1173 aa21.66■■□□□ 1.06
CCDC78-201ENST00000293889 ZC3H12CQ9C0D7 883 aaKnown RBP21.66■■□□□ 1.06
CCDC78-201ENST00000293889 NDUFB9Q9Y6M9 179 aa21.66■■□□□ 1.06
CCDC78-201ENST00000293889 MCAMP43121 646 aa21.65■■□□□ 1.06
CCDC78-201ENST00000293889 C9orf131Q5VYM1 1079 aa21.65■■□□□ 1.06
CCDC78-201ENST00000293889 ZNF804AQ7Z570 1209 aa21.65■■□□□ 1.06
CCDC78-201ENST00000293889 SUPT20HQ8NEM7 779 aa21.65■■□□□ 1.06
CCDC78-201ENST00000293889 EYA3Q99504 573 aa21.65■■□□□ 1.06
CCDC78-201ENST00000293889 HAUS7Q99871 368 aa21.65■■□□□ 1.06
CCDC78-201ENST00000293889 GNL3LQ9NVN8 582 aaKnown RBP21.65■■□□□ 1.06
CCDC78-201ENST00000293889 RASGRF1Q13972 1273 aa21.64■■□□□ 1.05
CCDC78-201ENST00000293889 PI16Q6UXB8 463 aa21.64■■□□□ 1.05
CCDC78-201ENST00000293889 SNRKQ9NRH2 765 aa21.64■■□□□ 1.05
CCDC78-201ENST00000293889 RNF181Q9P0P0 153 aa21.64■■□□□ 1.05
CCDC78-201ENST00000293889 IQSEC3Q9UPP2 1182 aaPredicted RBP21.64■■□□□ 1.05
CCDC78-201ENST00000293889 SDSP20132 328 aa21.63■■□□□ 1.05
CCDC78-201ENST00000293889 DNAJC2Q99543 621 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms