RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 EYA3Q99504 573 aa12.4□□□□□ -0.42
CCDC58-201ENST00000291458 PSMD14O00487 310 aa12.39□□□□□ -0.43
CCDC58-201ENST00000291458 IGHMBP2P38935 993 aaKnown RBP12.39□□□□□ -0.43
CCDC58-201ENST00000291458 CASP7P55210 303 aa12.39□□□□□ -0.43
CCDC58-201ENST00000291458 MRPL50Q8N5N7 158 aaKnown RBP12.39□□□□□ -0.43
CCDC58-201ENST00000291458 SSH1Q8WYL5 1049 aa12.39□□□□□ -0.43
CCDC58-201ENST00000291458 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
CCDC58-201ENST00000291458 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
CCDC58-201ENST00000291458 C9orf78Q9NZ63 289 aaPredicted RBP12.39□□□□□ -0.43
CCDC58-201ENST00000291458 XDHP47989 1333 aa12.38□□□□□ -0.43
CCDC58-201ENST00000291458 WTIPA6NIX2 430 aaPredicted RBP12.38□□□□□ -0.43
CCDC58-201ENST00000291458 IER5LQ5T953 404 aa12.38□□□□□ -0.43
CCDC58-201ENST00000291458 SRCIN1Q9C0H9 1055 aa12.38□□□□□ -0.43
CCDC58-201ENST00000291458 KCNQ5Q9NR82 932 aa12.38□□□□□ -0.43
CCDC58-201ENST00000291458 PSME4Q14997 1843 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 GRM8O00222 908 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 MKRN3Q13064 507 aaKnown RBP12.37□□□□□ -0.43
CCDC58-201ENST00000291458 TNIP1Q15025 636 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 PNMA8AQ86V59 439 aaPredicted RBP12.37□□□□□ -0.43
CCDC58-201ENST00000291458 MICALL2Q8IY33 904 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 SLC39A7Q92504 469 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 ZC3H12CQ9C0D7 883 aaKnown RBP12.37□□□□□ -0.43
CCDC58-201ENST00000291458 VPS33BQ9H267 617 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 GPRC5DQ9NZD1 345 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
CCDC58-201ENST00000291458 ANKRD18BA2A2Z9 1011 aa12.36□□□□□ -0.43
CCDC58-201ENST00000291458 KLRK1P26718 216 aa12.36□□□□□ -0.43
CCDC58-201ENST00000291458 KCNJ4P48050 445 aa12.36□□□□□ -0.43
CCDC58-201ENST00000291458 HNRNPUQ00839 825 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC58-201ENST00000291458 FMR1Q06787 632 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC58-201ENST00000291458 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
CCDC58-201ENST00000291458 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
CCDC58-201ENST00000291458 SUCLG2Q96I99 432 aa12.36□□□□□ -0.43
CCDC58-201ENST00000291458 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
CCDC58-201ENST00000291458 PLA2G12BQ9BX93 195 aa12.36□□□□□ -0.43
CCDC58-201ENST00000291458 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
CCDC58-201ENST00000291458 MINPP1Q9UNW1 487 aa12.36□□□□□ -0.43
CCDC58-201ENST00000291458 TRAF5O00463 557 aa12.35□□□□□ -0.43
CCDC58-201ENST00000291458 PLIN1O60240 522 aa12.35□□□□□ -0.43
CCDC58-201ENST00000291458 ATP2B4P23634 1241 aa12.35□□□□□ -0.43
CCDC58-201ENST00000291458 FOXO4P98177 505 aa12.35□□□□□ -0.43
CCDC58-201ENST00000291458 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
CCDC58-201ENST00000291458 RBM26Q5T8P6 1007 aaKnown RBP12.35□□□□□ -0.43
CCDC58-201ENST00000291458 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
CCDC58-201ENST00000291458 KLRG1Q96E93 195 aa12.35□□□□□ -0.43
CCDC58-201ENST00000291458 BSDC1Q9NW68 430 aaPredicted RBP12.35□□□□□ -0.43
CCDC58-201ENST00000291458 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
CCDC58-201ENST00000291458 TRPM7Q96QT4 1865 aa12.35□□□□□ -0.43
CCDC58-201ENST00000291458 SNAP23O00161 211 aa12.34□□□□□ -0.43
CCDC58-201ENST00000291458 TAF5LO75529 589 aa12.34□□□□□ -0.43
CCDC58-201ENST00000291458 ALDH1L1O75891 902 aa12.34□□□□□ -0.43
CCDC58-201ENST00000291458 NBPF7P0C2Y1 421 aaPredicted RBP12.34□□□□□ -0.43
CCDC58-201ENST00000291458 C7P10643 843 aa12.34□□□□□ -0.43
CCDC58-201ENST00000291458 CCT4P50991 539 aaKnown RBP12.34□□□□□ -0.43
CCDC58-201ENST00000291458 TBC1D10BQ4KMP7 808 aaPredicted RBP12.34□□□□□ -0.43
CCDC58-201ENST00000291458 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
CCDC58-201ENST00000291458 EFCAB3Q8N7B9 438 aa12.34□□□□□ -0.43
CCDC58-201ENST00000291458 ZNF408Q9H9D4 720 aa12.34□□□□□ -0.43
CCDC58-201ENST00000291458 ADARB2Q9NS39 739 aaKnown RBP12.34□□□□□ -0.43
CCDC58-201ENST00000291458 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
CCDC58-201ENST00000291458 ZNF646O15015 1829 aaPredicted RBP12.34□□□□□ -0.43
CCDC58-201ENST00000291458 PTPRCP08575 1304 aa12.34□□□□□ -0.43
CCDC58-201ENST00000291458 CHRNDQ07001 517 aa12.33□□□□□ -0.44
CCDC58-201ENST00000291458 GRM1Q13255 1194 aa12.33□□□□□ -0.44
CCDC58-201ENST00000291458 CCDC57Q2TAC2 916 aa12.33□□□□□ -0.44
CCDC58-201ENST00000291458 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
CCDC58-201ENST00000291458 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
CCDC58-201ENST00000291458 DNAJC5GQ8N7S2 189 aa12.33□□□□□ -0.44
CCDC58-201ENST00000291458 MXD3Q9BW11 206 aa12.33□□□□□ -0.44
CCDC58-201ENST00000291458 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
CCDC58-201ENST00000291458 MED23Q9ULK4 1368 aa12.32□□□□□ -0.44
CCDC58-201ENST00000291458 H7C1D1 291 aa12.32□□□□□ -0.44
CCDC58-201ENST00000291458 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
CCDC58-201ENST00000291458 EGFRP00533 1210 aa12.32□□□□□ -0.44
CCDC58-201ENST00000291458 CSF1RP07333 972 aa12.32□□□□□ -0.44
CCDC58-201ENST00000291458 TXNRD3Q86VQ6 643 aa12.32□□□□□ -0.44
CCDC58-201ENST00000291458 GLIS2Q9BZE0 524 aaPredicted RBP12.32□□□□□ -0.44
CCDC58-201ENST00000291458 BICC1Q9H694 974 aaKnown RBP12.32□□□□□ -0.44
CCDC58-201ENST00000291458 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
CCDC58-201ENST00000291458 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
CCDC58-201ENST00000291458 NOB1Q9ULX3 412 aaKnown RBP12.32□□□□□ -0.44
CCDC58-201ENST00000291458 POLR2AP24928 1970 aaKnown RBP12.32□□□□□ -0.44
CCDC58-201ENST00000291458 ZNF804BA4D1E1 1349 aa12.32□□□□□ -0.44
CCDC58-201ENST00000291458 TMEM88BA6NKF7 163 aa12.31□□□□□ -0.44
CCDC58-201ENST00000291458 HIRAP54198 1017 aaPredicted RBP12.31□□□□□ -0.44
CCDC58-201ENST00000291458 KIF4BQ2VIQ3 1234 aa12.31□□□□□ -0.44
CCDC58-201ENST00000291458 ALDH1L2Q3SY69 923 aa12.31□□□□□ -0.44
CCDC58-201ENST00000291458 DLK2Q6UY11 383 aa12.31□□□□□ -0.44
CCDC58-201ENST00000291458 ANKRD2Q9GZV1 360 aa12.31□□□□□ -0.44
CCDC58-201ENST00000291458 JAG2Q9Y219 1238 aa12.31□□□□□ -0.44
CCDC58-201ENST00000291458 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
CCDC58-201ENST00000291458 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
CCDC58-201ENST00000291458 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
CCDC58-201ENST00000291458 PUS3Q9BZE2 481 aaKnown RBP12.3□□□□□ -0.44
CCDC58-201ENST00000291458 METRNQ9UJH8 293 aa12.3□□□□□ -0.44
CCDC58-201ENST00000291458 ASTN2O75129 1339 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms