RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 COA1Q9GZY4 146 aa28.26■■■□□ 2.12
GFRA4-201ENST00000290417 ADAMTSL1Q8N6G6 1762 aa28.26■■■□□ 2.11
GFRA4-201ENST00000290417 HSPA6P17066 643 aa28.26■■■□□ 2.11
GFRA4-201ENST00000290417 PTPN12Q05209 780 aaKnown RBP28.26■■■□□ 2.11
GFRA4-201ENST00000290417 METTL24Q5JXM2 366 aa28.26■■■□□ 2.11
GFRA4-201ENST00000290417 ITPRIPQ8IWB1 547 aa28.26■■■□□ 2.11
GFRA4-201ENST00000290417 VIL1P09327 827 aaKnown RBP28.25■■■□□ 2.11
GFRA4-201ENST00000290417 CNOT7Q9UIV1 285 aaKnown RBP28.25■■■□□ 2.11
GFRA4-201ENST00000290417 IRS2Q9Y4H2 1338 aa28.24■■■□□ 2.11
GFRA4-201ENST00000290417 USP17L3A6NCW0 530 aa28.24■■■□□ 2.11
GFRA4-201ENST00000290417 USP17L4A6NCW7 530 aa28.24■■■□□ 2.11
GFRA4-201ENST00000290417 GNAI2P04899 355 aa28.24■■■□□ 2.11
GFRA4-201ENST00000290417 USP17L1Q7RTZ2 530 aa28.24■■■□□ 2.11
GFRA4-201ENST00000290417 ADARB2Q9NS39 739 aaKnown RBP28.24■■■□□ 2.11
GFRA4-201ENST00000290417 SHTN1A0MZ66 631 aa28.23■■■□□ 2.11
GFRA4-201ENST00000290417 RPS12P25398 132 aaKnown RBP28.23■■■□□ 2.11
GFRA4-201ENST00000290417 UBE4AQ14139 1066 aa28.23■■■□□ 2.11
GFRA4-201ENST00000290417 C15orf52Q6ZUT6 534 aaKnown RBP28.23■■■□□ 2.11
GFRA4-201ENST00000290417 MICALL2Q8IY33 904 aa28.23■■■□□ 2.11
GFRA4-201ENST00000290417 PANK1Q8TE04 598 aa28.23■■■□□ 2.11
GFRA4-201ENST00000290417 DPF2Q92785 391 aa28.23■■■□□ 2.11
GFRA4-201ENST00000290417 FBXW7Q969H0 707 aa28.23■■■□□ 2.11
GFRA4-201ENST00000290417 EYA2O00167 538 aa28.22■■■□□ 2.11
GFRA4-201ENST00000290417 USP50Q70EL3 339 aaPredicted RBP28.22■■■□□ 2.11
GFRA4-201ENST00000290417 SIL1Q9H173 461 aa28.22■■■□□ 2.11
GFRA4-201ENST00000290417 ZNF646O15015 1829 aaPredicted RBP28.22■■■□□ 2.11
GFRA4-201ENST00000290417 H7C1D1 291 aa28.21■■■□□ 2.11
GFRA4-201ENST00000290417 RSBN1LQ6PCB5 846 aaPredicted RBP28.21■■■□□ 2.11
GFRA4-201ENST00000290417 ZNF804AQ7Z570 1209 aa28.21■■■□□ 2.11
GFRA4-201ENST00000290417 CD209Q9NNX6 404 aa28.21■■■□□ 2.11
GFRA4-201ENST00000290417 SRGAP3O43295 1099 aa28.2■■■□□ 2.11
GFRA4-201ENST00000290417 PA2G4Q9UQ80 394 aaKnown RBP28.2■■■□□ 2.11
GFRA4-201ENST00000290417 PDE8BO95263 885 aa28.19■■■□□ 2.1
GFRA4-201ENST00000290417 MS4A1P11836 297 aa28.19■■■□□ 2.1
GFRA4-201ENST00000290417 VGLL2Q8N8G2 317 aa28.19■■■□□ 2.1
GFRA4-201ENST00000290417 MTX1Q13505 466 aa28.18■■■□□ 2.1
GFRA4-201ENST00000290417 MAP1SQ66K74 1059 aaPredicted RBP28.18■■■□□ 2.1
GFRA4-201ENST00000290417 TTLL5Q6EMB2 1281 aa28.18■■■□□ 2.1
GFRA4-201ENST00000290417 ATG9AQ7Z3C6 839 aa28.18■■■□□ 2.1
GFRA4-201ENST00000290417 AGBL3Q8NEM8 1001 aa28.18■■■□□ 2.1
GFRA4-201ENST00000290417 TRPM4Q8TD43 1214 aa28.18■■■□□ 2.1
GFRA4-201ENST00000290417 FBXO3Q9UK99 471 aa28.18■■■□□ 2.1
GFRA4-201ENST00000290417 ZBTB7BO15156 539 aaPredicted RBP28.17■■■□□ 2.1
GFRA4-201ENST00000290417 CIAO1O76071 339 aa28.17■■■□□ 2.1
GFRA4-201ENST00000290417 DACT2Q5SW24 774 aa28.17■■■□□ 2.1
GFRA4-201ENST00000290417 STRIP1Q5VSL9 837 aa28.17■■■□□ 2.1
GFRA4-201ENST00000290417 SAMD7Q7Z3H4 446 aa28.17■■■□□ 2.1
GFRA4-201ENST00000290417 MXD3Q9BW11 206 aa28.17■■■□□ 2.1
GFRA4-201ENST00000290417 COPRSQ9NQ92 184 aa28.17■■■□□ 2.1
GFRA4-201ENST00000290417 ZNF609O15014 1411 aa28.16■■■□□ 2.1
GFRA4-201ENST00000290417 GYG1P46976 350 aa28.16■■■□□ 2.1
GFRA4-201ENST00000290417 APLP1P51693 650 aa28.16■■■□□ 2.1
GFRA4-201ENST00000290417 GTF2IP78347 998 aa28.16■■■□□ 2.1
GFRA4-201ENST00000290417 C1orf115Q9H7X2 142 aa28.16■■■□□ 2.1
GFRA4-201ENST00000290417 IL1R1P14778 569 aa28.15■■■□□ 2.1
GFRA4-201ENST00000290417 TBC1D10BQ4KMP7 808 aaPredicted RBP28.15■■■□□ 2.1
GFRA4-201ENST00000290417 HIBADHP31937 336 aaKnown RBP28.14■■■□□ 2.1
GFRA4-201ENST00000290417 HIRAP54198 1017 aaPredicted RBP28.14■■■□□ 2.1
GFRA4-201ENST00000290417 PUM3Q15397 648 aaKnown RBP28.14■■■□□ 2.1
GFRA4-201ENST00000290417 RBM26Q5T8P6 1007 aaKnown RBP28.14■■■□□ 2.1
GFRA4-201ENST00000290417 CNTROBQ8N137 903 aa28.14■■■□□ 2.1
GFRA4-201ENST00000290417 FAM84BQ96KN1 310 aaPredicted RBP28.14■■■□□ 2.1
GFRA4-201ENST00000290417 GMLQ99445 158 aa28.14■■■□□ 2.1
GFRA4-201ENST00000290417 PNMA6EA0A0J9YXQ4 647 aa28.13■■■□□ 2.09
GFRA4-201ENST00000290417 IL15P40933 162 aaPredicted RBP28.13■■■□□ 2.09
GFRA4-201ENST00000290417 CEP126Q9P2H0 1117 aa28.13■■■□□ 2.09
GFRA4-201ENST00000290417 EGFRP00533 1210 aa28.12■■■□□ 2.09
GFRA4-201ENST00000290417 VPS37DQ86XT2 251 aa28.12■■■□□ 2.09
GFRA4-201ENST00000290417 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.12■■■□□ 2.09
GFRA4-201ENST00000290417 MYO3BQ8WXR4 1341 aa28.12■■■□□ 2.09
GFRA4-201ENST00000290417 ITGBL1O95965 494 aaPredicted RBP28.11■■■□□ 2.09
GFRA4-201ENST00000290417 IFIT1P09914 478 aaKnown RBP28.11■■■□□ 2.09
GFRA4-201ENST00000290417 USP17L8P0C7I0 530 aa28.11■■■□□ 2.09
GFRA4-201ENST00000290417 FGFR2P21802 821 aa28.11■■■□□ 2.09
GFRA4-201ENST00000290417 ZNF280AP59817 542 aaPredicted RBP28.1■■■□□ 2.09
GFRA4-201ENST00000290417 MVPQ14764 893 aaKnown RBP28.1■■■□□ 2.09
GFRA4-201ENST00000290417 KIF4BQ2VIQ3 1234 aa28.1■■■□□ 2.09
GFRA4-201ENST00000290417 CAVIN4Q5BKX8 364 aa28.1■■■□□ 2.09
GFRA4-201ENST00000290417 JAG2Q9Y219 1238 aa28.1■■■□□ 2.09
GFRA4-201ENST00000290417 COG6Q9Y2V7 657 aa28.1■■■□□ 2.09
GFRA4-201ENST00000290417 SLC5A1P13866 664 aa28.09■■■□□ 2.09
GFRA4-201ENST00000290417 HTRA3P83110 453 aa28.09■■■□□ 2.09
GFRA4-201ENST00000290417 FBXO33Q7Z6M2 555 aa28.09■■■□□ 2.09
GFRA4-201ENST00000290417 TDRD7Q8NHU6 1098 aaKnown RBP28.09■■■□□ 2.09
GFRA4-201ENST00000290417 LPIN2Q92539 896 aa28.09■■■□□ 2.09
GFRA4-201ENST00000290417 PASKQ96RG2 1323 aa28.09■■■□□ 2.09
GFRA4-201ENST00000290417 ZC3H15Q8WU90 426 aaKnown RBP28.09■■■□□ 2.09
GFRA4-201ENST00000290417 CEP350Q5VT06 3117 aa28.08■■■□□ 2.09
GFRA4-201ENST00000290417 SASH1O94885 1247 aa28.08■■■□□ 2.09
GFRA4-201ENST00000290417 ATP8B2P98198 1209 aa28.08■■■□□ 2.09
GFRA4-201ENST00000290417 PGAP2Q9UHJ9 254 aa28.08■■■□□ 2.09
GFRA4-201ENST00000290417 BCAMP50895 628 aa28.07■■■□□ 2.08
GFRA4-201ENST00000290417 ATP2B3Q16720 1220 aa28.07■■■□□ 2.08
GFRA4-201ENST00000290417 KIAA0825Q8IV33 1275 aa28.07■■■□□ 2.08
GFRA4-201ENST00000290417 OGFOD1Q8N543 542 aa28.07■■■□□ 2.08
GFRA4-201ENST00000290417 MYOZ2Q9NPC6 264 aa28.07■■■□□ 2.08
GFRA4-201ENST00000290417 DDX19BQ9UMR2 479 aa28.07■■■□□ 2.08
GFRA4-201ENST00000290417 IQSEC3Q9UPP2 1182 aaPredicted RBP28.07■■■□□ 2.08
GFRA4-201ENST00000290417 POLR2AP24928 1970 aaKnown RBP28.07■■■□□ 2.08
GFRA4-201ENST00000290417 MYH13Q9UKX3 1938 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms