RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 KIF9Q9HAQ2 790 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 MKNK2Q9HBH9 465 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 EVA1BQ9NVM1 165 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.97□□□□□ -1.61
NCOA1-201ENST00000288599 TACC3Q9Y6A5 838 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 MRVI1Q9Y6F6 885 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 HSF2BPO75031 334 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 SLC4A2P04920 1241 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 NAP1L3Q99457 506 aaPredicted RBP4.97□□□□□ -1.61
NCOA1-201ENST00000288599 NOP14P78316 857 aaKnown RBP4.96□□□□□ -1.61
NCOA1-201ENST00000288599 PPP2R5DQ14738 602 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 ESCO1Q5FWF5 840 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 HERC4Q5GLZ8 1057 aaPredicted RBP4.96□□□□□ -1.61
NCOA1-201ENST00000288599 TBC1D31Q96DN5 1066 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 PRDM11Q9NQV5 511 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 PARD3Q8TEW0 1356 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 ZMYND10O75800 440 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 C16orf62Q7Z3J2 963 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 WAPLQ7Z5K2 1190 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 PNISRQ8TF01 805 aaKnown RBP4.96□□□□□ -1.61
NCOA1-201ENST00000288599 NUP62CLQ9H1M0 184 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 MFSD1Q9H3U5 465 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 CLIP2Q9UDT6 1046 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 USP25Q9UHP3 1055 aa4.96□□□□□ -1.61
NCOA1-201ENST00000288599 CGNL1Q0VF96 1302 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 GCOM1H8Y6P7 765 aaPredicted RBP4.96□□□□□ -1.62
NCOA1-201ENST00000288599 SNUPNO95149 360 aaKnown RBP4.96□□□□□ -1.62
NCOA1-201ENST00000288599 MYZAPP0CAP1 466 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 DPH6Q7L8W6 267 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 SYCP3Q8IZU3 236 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 KLHL3Q9UH77 587 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 FAM169AQ9Y6X4 670 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 SMG6Q86US8 1419 aaKnown RBP4.96□□□□□ -1.62
NCOA1-201ENST00000288599 GNAI1P63096 354 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 ELMOD1Q8N336 334 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 ATP6V0A1Q93050 837 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 RAB34Q9BZG1 259 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 PIDD1Q9HB75 910 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 ZBED9Q6R2W3 1325 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 SERPINC1P01008 464 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 APOA4P06727 396 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 ZSCAN23Q3MJ62 389 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 SMCR8Q8TEV9 937 aaPredicted RBP4.96□□□□□ -1.62
NCOA1-201ENST00000288599 RIOK1Q9BRS2 568 aaKnown RBP4.96□□□□□ -1.62
NCOA1-201ENST00000288599 ZNF692Q9BU19 519 aaPredicted RBP4.96□□□□□ -1.62
NCOA1-201ENST00000288599 TXNDC16Q9P2K2 825 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 SUFUQ9UMX1 484 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 COL17A1Q9UMD9 1497 aaPredicted RBP4.96□□□□□ -1.62
NCOA1-201ENST00000288599 EFCAB14O75071 495 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 ZNF174Q15697 407 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 IMMTQ16891 758 aaKnown RBP4.96□□□□□ -1.62
NCOA1-201ENST00000288599 PPP4R3BQ5MIZ7 849 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 GKAP1Q5VSY0 366 aaPredicted RBP4.96□□□□□ -1.62
NCOA1-201ENST00000288599 IQCEQ6IPM2 695 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 RUFY4Q6ZNE9 571 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 SKAP1Q86WV1 359 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 CCDC144CPQ8IYA2 1237 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 IFT74Q96LB3 600 aa4.96□□□□□ -1.62
NCOA1-201ENST00000288599 INSRP06213 1382 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 C9orf84Q5VXU9 1444 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 CCP110O43303 1012 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 C4orf50Q6ZRC1 276 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 TRMT1LQ7Z2T5 733 aaKnown RBP4.95□□□□□ -1.62
NCOA1-201ENST00000288599 NT5DC4Q86YG4 428 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 NAP1L4Q99733 375 aaKnown RBP4.95□□□□□ -1.62
NCOA1-201ENST00000288599 SWAP70Q9UH65 585 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 MOSPD1Q9UJG1 213 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 DUOX2Q9NRD8 1548 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 MADDQ8WXG6 1647 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 PTPRTO14522 1441 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 KRT38O76015 456 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 GNAI3P08754 354 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 ATP2A2P16615 1042 aaKnown RBP4.95□□□□□ -1.62
NCOA1-201ENST00000288599 NFKBIAP25963 317 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 TNFRSF8P28908 595 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 EVCP57679 992 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 TSTA3Q13630 321 aaPredicted RBP4.95□□□□□ -1.62
NCOA1-201ENST00000288599 CCDC38Q502W7 563 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 PGBD3Q8N328 593 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 FAM167BQ9BTA0 163 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 F8W8V4 182 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 TEX28O15482 410 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 RNF8O76064 485 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 RRP1P56182 461 aaKnown RBP4.95□□□□□ -1.62
NCOA1-201ENST00000288599 NONOQ15233 471 aaKnown RBP eCLIP4.95□□□□□ -1.62
NCOA1-201ENST00000288599 PDCD7Q8N8D1 485 aaKnown RBP4.95□□□□□ -1.62
NCOA1-201ENST00000288599 MAIP1Q8WWC4 291 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 VCXQ9H320 206 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 DACH1Q9UI36 760 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 SPG7Q9UQ90 795 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 KIF28PB7ZC32 967 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 MGEA5O60502 916 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 STARD3NLO95772 234 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 BAG3O95817 575 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 SLMAPQ14BN4 828 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 NFKBIBQ15653 356 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 TMEM266Q2M3C6 531 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 SPECC1Q5M775 1068 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 TTC23Q5W5X9 447 aa4.95□□□□□ -1.62
NCOA1-201ENST00000288599 SMAP1Q8IYB5 467 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms