RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 USP21Q9UK80 565 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 TAF6LQ9Y6J9 622 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 ADAMTSL3P82987 1691 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 DCCP43146 1447 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 JAK2O60674 1132 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 CYP19A1P11511 503 aaPredicted RBP10.99□□□□□ -0.65
CSF1R-201ENST00000286301 PIBF1Q8WXW3 757 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 INTS4Q96HW7 963 aaKnown RBP10.99□□□□□ -0.65
CSF1R-201ENST00000286301 CCDC39Q9UFE4 941 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 OVOS2A0A0G2JMS6 1433 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 ERICH2A1L162 156 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 GOLGA8BA8MQT2 603 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 GADD45BO75293 160 aaPredicted RBP10.99□□□□□ -0.65
CSF1R-201ENST00000286301 RPS6KB1P23443 525 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 SETDB2Q96T68 719 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 GNL3LQ9NVN8 582 aaKnown RBP10.99□□□□□ -0.65
CSF1R-201ENST00000286301 CGNQ9P2M7 1197 aaKnown RBP10.99□□□□□ -0.65
CSF1R-201ENST00000286301 RGPD2P0DJD1 1756 aa10.99□□□□□ -0.65
CSF1R-201ENST00000286301 RFC4P35249 363 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 PHKA1P46020 1223 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
CSF1R-201ENST00000286301 MAGEB6Q8N7X4 407 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 ANKIB1Q9P2G1 1089 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 F13A1P00488 732 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 CYP21A2P08686 494 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 TTLL11Q8NHH1 800 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 SMARCC1Q92922 1105 aaPredicted RBP10.98□□□□□ -0.65
CSF1R-201ENST00000286301 LMBRD1Q9NUN5 540 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 ZBTB22O15209 634 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 GPAA1O43292 621 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 ANKRD18AQ8IVF6 992 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 CDC5LQ99459 802 aaKnown RBP10.98□□□□□ -0.65
CSF1R-201ENST00000286301 TSPY26PQ9H489 355 aa10.98□□□□□ -0.65
CSF1R-201ENST00000286301 CAMTA1Q9Y6Y1 1673 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 PXDNLA1KZ92 1463 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 ME1P48163 572 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 CAVIN4Q5BKX8 364 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 SUSD4Q5VX71 490 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 ATG9AQ7Z3C6 839 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 CCNL1Q9UK58 526 aaPredicted RBP10.97□□□□□ -0.65
CSF1R-201ENST00000286301 KLF18A0A0U1RQI7 1052 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 RFX5P48382 616 aaPredicted RBP10.97□□□□□ -0.65
CSF1R-201ENST00000286301 TRIM29Q14134 588 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 NECTIN1Q15223 517 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 CKAP2LQ8IYA6 745 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 AK7Q96M32 723 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 CDCA7Q9BWT1 371 aaPredicted RBP10.97□□□□□ -0.65
CSF1R-201ENST00000286301 NACAP1Q9BZK3 213 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 COL5A2P05997 1499 aaPredicted RBP10.97□□□□□ -0.65
CSF1R-201ENST00000286301 BRD1O95696 1058 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 POLR3DP05423 398 aaPredicted RBP10.97□□□□□ -0.65
CSF1R-201ENST00000286301 HSPD1P10809 573 aaKnown RBP10.97□□□□□ -0.65
CSF1R-201ENST00000286301 IL6STP40189 918 aaPredicted RBP10.97□□□□□ -0.65
CSF1R-201ENST00000286301 AKAP17AQ02040 695 aaKnown RBP10.97□□□□□ -0.65
CSF1R-201ENST00000286301 SCARF1Q14162 830 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 AK9Q5TCS8 1911 aa10.97□□□□□ -0.65
CSF1R-201ENST00000286301 RABL6Q3YEC7 729 aaPredicted RBP10.96□□□□□ -0.65
CSF1R-201ENST00000286301 MARCH10Q8NA82 808 aaPredicted RBP10.96□□□□□ -0.65
CSF1R-201ENST00000286301 ISCA1Q9BUE6 129 aa10.96□□□□□ -0.65
CSF1R-201ENST00000286301 BCAMP50895 628 aa10.96□□□□□ -0.65
CSF1R-201ENST00000286301 GIMAP6Q6P9H5 292 aa10.96□□□□□ -0.65
CSF1R-201ENST00000286301 DHX32Q7L7V1 743 aaKnown RBP10.96□□□□□ -0.65
CSF1R-201ENST00000286301 MED1Q15648 1581 aaPredicted RBP10.96□□□□□ -0.66
CSF1R-201ENST00000286301 RAD21O60216 631 aa10.96□□□□□ -0.66
CSF1R-201ENST00000286301 HMGB1P09429 215 aaKnown RBP10.96□□□□□ -0.66
CSF1R-201ENST00000286301 CCDC102BQ68D86 513 aa10.96□□□□□ -0.66
CSF1R-201ENST00000286301 OSBP2Q969R2 916 aa10.96□□□□□ -0.66
CSF1R-201ENST00000286301 NLRP3Q96P20 1036 aa10.96□□□□□ -0.66
CSF1R-201ENST00000286301 ZKSCAN3Q9BRR0 538 aa10.96□□□□□ -0.66
CSF1R-201ENST00000286301 RTCBQ9Y3I0 505 aaKnown RBP10.96□□□□□ -0.66
CSF1R-201ENST00000286301 PRC1O43663 620 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 CYP7A1P22680 504 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 OTUD7BQ6GQQ9 843 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 CDC37L1Q7L3B6 337 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 NSFL1CQ9UNZ2 370 aaKnown RBP10.95□□□□□ -0.66
CSF1R-201ENST00000286301 ZDHHC9Q9Y397 364 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 MBD4O95243 580 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 ZFYP08048 801 aaPredicted RBP10.95□□□□□ -0.66
CSF1R-201ENST00000286301 NKX1-1Q15270 411 aaPredicted RBP10.95□□□□□ -0.66
CSF1R-201ENST00000286301 TTF1Q15361 905 aaPredicted RBP10.95□□□□□ -0.66
CSF1R-201ENST00000286301 PUM3Q15397 648 aaKnown RBP10.95□□□□□ -0.66
CSF1R-201ENST00000286301 TRERF1Q96PN7 1200 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 ARMT1Q9H993 441 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 HELLSQ9NRZ9 838 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 SRP68Q9UHB9 627 aaKnown RBP10.95□□□□□ -0.66
CSF1R-201ENST00000286301 UTYO14607 1347 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 ZNF532Q9HCE3 1301 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 CCDC69A6NI79 296 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 IFIT3O14879 490 aaKnown RBP10.95□□□□□ -0.66
CSF1R-201ENST00000286301 DHX16O60231 1041 aaKnown RBP10.95□□□□□ -0.66
CSF1R-201ENST00000286301 PDE8BO95263 885 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 USPL1Q5W0Q7 1092 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 CCDC73Q6ZRK6 1079 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 NCOA7Q8NI08 942 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 SDF4Q9BRK5 362 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 TFCP2L1Q9NZI6 479 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 TMEM63CQ9P1W3 806 aa10.95□□□□□ -0.66
CSF1R-201ENST00000286301 MAST3O60307 1309 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms