RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ADCK5Q3MIX3 580 aa15.35■□□□□ 0.05
C9orf3-201ENST00000277198 KIAA1551Q9HCM1 1747 aa15.35■□□□□ 0.05
C9orf3-201ENST00000277198 RFX7Q2KHR2 1363 aa15.35■□□□□ 0.05
C9orf3-201ENST00000277198 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
C9orf3-201ENST00000277198 DZIP3Q86Y13 1208 aaKnown RBP15.35■□□□□ 0.05
C9orf3-201ENST00000277198 CCDC83Q8IWF9 413 aa15.35■□□□□ 0.05
C9orf3-201ENST00000277198 CCDC24Q8N4L8 307 aa15.35■□□□□ 0.05
C9orf3-201ENST00000277198 CARMIL3Q8ND23 1372 aa15.34■□□□□ 0.05
C9orf3-201ENST00000277198 SCN7AQ01118 1682 aa15.34■□□□□ 0.05
C9orf3-201ENST00000277198 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
C9orf3-201ENST00000277198 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
C9orf3-201ENST00000277198 IGKV5-2P06315 115 aa15.34■□□□□ 0.05
C9orf3-201ENST00000277198 ME3Q16798 604 aa15.34■□□□□ 0.05
C9orf3-201ENST00000277198 TICAM2Q86XR7 235 aa15.34■□□□□ 0.05
C9orf3-201ENST00000277198 COPRSQ9NQ92 184 aa15.34■□□□□ 0.05
C9orf3-201ENST00000277198 MED23Q9ULK4 1368 aa15.34■□□□□ 0.05
C9orf3-201ENST00000277198 NEURL1BA8MQ27 555 aa15.33■□□□□ 0.05
C9orf3-201ENST00000277198 SLC27A2O14975 620 aa15.33■□□□□ 0.05
C9orf3-201ENST00000277198 LARGE1O95461 756 aa15.33■□□□□ 0.05
C9orf3-201ENST00000277198 DPEP1P16444 411 aa15.33■□□□□ 0.05
C9orf3-201ENST00000277198 KCNJ4P48050 445 aa15.33■□□□□ 0.05
C9orf3-201ENST00000277198 NMIQ13287 307 aaPredicted RBP15.33■□□□□ 0.05
C9orf3-201ENST00000277198 GCKRQ14397 625 aa15.33■□□□□ 0.05
C9orf3-201ENST00000277198 FOXD4L6Q3SYB3 417 aaPredicted RBP15.33■□□□□ 0.05
C9orf3-201ENST00000277198 GLIPR1L2Q4G1C9 344 aa15.33■□□□□ 0.05
C9orf3-201ENST00000277198 FOXD4L3Q6VB84 417 aaPredicted RBP15.33■□□□□ 0.05
C9orf3-201ENST00000277198 METTL22Q9BUU2 404 aaPredicted RBP15.33■□□□□ 0.05
C9orf3-201ENST00000277198 ELP1O95163 1332 aa15.33■□□□□ 0.04
C9orf3-201ENST00000277198 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.04
C9orf3-201ENST00000277198 A0A087WZG4 1122 aa15.33■□□□□ 0.04
C9orf3-201ENST00000277198 PTMAP06454 111 aaKnown RBP15.33■□□□□ 0.04
C9orf3-201ENST00000277198 MYL6BP14649 208 aa15.33■□□□□ 0.04
C9orf3-201ENST00000277198 KRT32Q14532 448 aa15.33■□□□□ 0.04
C9orf3-201ENST00000277198 YY1P25490 414 aa15.32■□□□□ 0.04
C9orf3-201ENST00000277198 CHRNA5P30532 468 aa15.32■□□□□ 0.04
C9orf3-201ENST00000277198 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
C9orf3-201ENST00000277198 FUCA2Q9BTY2 467 aa15.32■□□□□ 0.04
C9orf3-201ENST00000277198 SERPINB2P05120 415 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 CPA1P15085 419 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 ATP5JP18859 108 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 KIAA2012Q0VF49 1180 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 HLFQ16534 295 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 FAM227BQ96M60 508 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 FSD1Q9BTV5 496 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 AFDNP55196 1824 aaKnown RBP15.31■□□□□ 0.04
C9orf3-201ENST00000277198 FIBPO43427 364 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 KCNA3P22001 575 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 RPS6KB1P23443 525 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 KRT85P78386 507 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 ST3GAL1Q11201 340 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-201ENST00000277198 TPCN1Q9ULQ1 816 aa15.31■□□□□ 0.04
C9orf3-201ENST00000277198 BCORQ6W2J9 1755 aa15.3■□□□□ 0.04
C9orf3-201ENST00000277198 DNM1Q05193 864 aaKnown RBP15.3■□□□□ 0.04
C9orf3-201ENST00000277198 RABL6Q3YEC7 729 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-201ENST00000277198 LARP1BQ659C4 914 aaKnown RBP15.3■□□□□ 0.04
C9orf3-201ENST00000277198 PDCL3Q9H2J4 239 aa15.3■□□□□ 0.04
C9orf3-201ENST00000277198 KDM4AO75164 1064 aa15.29■□□□□ 0.04
C9orf3-201ENST00000277198 TPM3P06753 285 aa15.29■□□□□ 0.04
C9orf3-201ENST00000277198 AIMP1Q12904 312 aaKnown RBP15.29■□□□□ 0.04
C9orf3-201ENST00000277198 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
C9orf3-201ENST00000277198 LRP10Q7Z4F1 713 aa15.29■□□□□ 0.04
C9orf3-201ENST00000277198 MAP7D2Q96T17 732 aa15.29■□□□□ 0.04
C9orf3-201ENST00000277198 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
C9orf3-201ENST00000277198 SCAND2PQ9GZW5 306 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-201ENST00000277198 BOLA2Q9H3K6 86 aa15.29■□□□□ 0.04
C9orf3-201ENST00000277198 NRXN2Q9P2S2 1712 aa15.29■□□□□ 0.04
C9orf3-201ENST00000277198 A0A0D9SFI3 127 aa15.29■□□□□ 0.04
C9orf3-201ENST00000277198 R3HCC1Q9Y3T6 440 aaKnown RBP15.29■□□□□ 0.04
C9orf3-201ENST00000277198 TAF5LO75529 589 aa15.28■□□□□ 0.04
C9orf3-201ENST00000277198 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-201ENST00000277198 TGFB2P61812 414 aa15.28■□□□□ 0.04
C9orf3-201ENST00000277198 COPS6Q7L5N1 327 aa15.28■□□□□ 0.04
C9orf3-201ENST00000277198 XAGE3Q8WTP9 111 aa15.28■□□□□ 0.04
C9orf3-201ENST00000277198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
C9orf3-201ENST00000277198 VPS37CA5D8V6 355 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-201ENST00000277198 ADCY5O95622 1261 aa15.27■□□□□ 0.04
C9orf3-201ENST00000277198 CCDC192P0DO97 292 aa15.27■□□□□ 0.04
C9orf3-201ENST00000277198 HCLS1P14317 486 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-201ENST00000277198 SASS6Q6UVJ0 657 aa15.27■□□□□ 0.04
C9orf3-201ENST00000277198 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.04
C9orf3-201ENST00000277198 TLR7Q9NYK1 1049 aaKnown RBP15.27■□□□□ 0.04
C9orf3-201ENST00000277198 USP25Q9UHP3 1055 aa15.27■□□□□ 0.04
C9orf3-201ENST00000277198 BCS1LQ9Y276 419 aa15.27■□□□□ 0.04
C9orf3-201ENST00000277198 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-201ENST00000277198 RFX5P48382 616 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-201ENST00000277198 PRR5LQ6MZQ0 368 aa15.27■□□□□ 0.03
C9orf3-201ENST00000277198 PIBF1Q8WXW3 757 aa15.27■□□□□ 0.03
C9orf3-201ENST00000277198 MYD88Q99836 296 aa15.27■□□□□ 0.03
C9orf3-201ENST00000277198 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-201ENST00000277198 FAM177BA6PVY3 158 aa15.26■□□□□ 0.03
C9orf3-201ENST00000277198 DYNC1I1O14576 645 aa15.26■□□□□ 0.03
C9orf3-201ENST00000277198 TNNI3KQ59H18 835 aa15.26■□□□□ 0.03
C9orf3-201ENST00000277198 MTERF4Q7Z6M4 381 aaKnown RBP15.26■□□□□ 0.03
C9orf3-201ENST00000277198 NECAB1Q8N987 351 aa15.26■□□□□ 0.03
C9orf3-201ENST00000277198 SIL1Q9H173 461 aa15.26■□□□□ 0.03
C9orf3-201ENST00000277198 FPGT-TNNI3KV9GXZ4 949 aa15.26■□□□□ 0.03
C9orf3-201ENST00000277198 PTPN12Q05209 780 aaKnown RBP15.25■□□□□ 0.03
C9orf3-201ENST00000277198 TOB2Q14106 344 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms