RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 RAD50Q92878 1312 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 SRGAP3O43295 1099 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 PKP1Q13835 747 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 SF3B3Q15393 1217 aaKnown RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 HS1BP3Q53T59 392 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 DALRD3Q5D0E6 543 aaKnown RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 TSHZ3Q63HK5 1081 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 PRPF40BQ6NWY9 871 aaKnown RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 LMBR1LQ6UX01 489 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 OLFM4Q6UX06 510 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 ERC1Q8IUD2 1116 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 CNTROBQ8N137 903 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 TTLL6Q8N841 843 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 PI4K2BQ8TCG2 481 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 RBM17Q96I25 401 aaKnown RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 PLA2G12BQ9BX93 195 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 BICC1Q9H694 974 aaKnown RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 CHMP3Q9Y3E7 222 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 TCHHQ07283 1943 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 SGSM2O43147 1006 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 GLRX3O76003 335 aaKnown RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 HOXA10P31260 410 aaPredicted RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 CCDC152Q4G0S7 254 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 CAVIN1Q6NZI2 390 aaKnown RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 DDX46Q7L014 1031 aaKnown RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 RUFY2Q8WXA3 655 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 CELF1Q92879 486 aaKnown RBP10.47□□□□□ -0.73
TRIM43-201ENST00000272395 PALD1Q9ULE6 856 aa10.47□□□□□ -0.73
TRIM43-201ENST00000272395 C21orf2O43822 256 aa10.46□□□□□ -0.74
TRIM43-201ENST00000272395 PRPF40AO75400 957 aaKnown RBP10.46□□□□□ -0.74
TRIM43-201ENST00000272395 HSP90B1P14625 803 aaKnown RBP10.46□□□□□ -0.74
TRIM43-201ENST00000272395 GPR162Q16538 588 aa10.46□□□□□ -0.74
TRIM43-201ENST00000272395 CNKSR1Q969H4 720 aa10.46□□□□□ -0.74
TRIM43-201ENST00000272395 GPATCH3Q96I76 525 aa10.46□□□□□ -0.74
TRIM43-201ENST00000272395 IL1RAPL2Q9NP60 686 aa10.46□□□□□ -0.74
TRIM43-201ENST00000272395 WDR33Q9C0J8 1336 aaKnown RBP10.45□□□□□ -0.74
TRIM43-201ENST00000272395 PPEF1O14829 653 aaPredicted RBP10.45□□□□□ -0.74
TRIM43-201ENST00000272395 CSF1RP07333 972 aa10.45□□□□□ -0.74
TRIM43-201ENST00000272395 NCLP19338 710 aaKnown RBP10.45□□□□□ -0.74
TRIM43-201ENST00000272395 ITGA6P23229 1130 aa10.45□□□□□ -0.74
TRIM43-201ENST00000272395 GRAPQ13588 217 aa10.45□□□□□ -0.74
TRIM43-201ENST00000272395 KIAA1211Q6ZU35 1233 aa10.45□□□□□ -0.74
TRIM43-201ENST00000272395 GRAPLQ8TC17 118 aaPredicted RBP10.45□□□□□ -0.74
TRIM43-201ENST00000272395 SYAP1Q96A49 352 aaPredicted RBP10.45□□□□□ -0.74
TRIM43-201ENST00000272395 CRAMP1Q96RY5 1269 aa10.45□□□□□ -0.74
TRIM43-201ENST00000272395 ALDH1B1P30837 517 aa10.44□□□□□ -0.74
TRIM43-201ENST00000272395 CLASRPQ8N2M8 674 aaKnown RBP10.44□□□□□ -0.74
TRIM43-201ENST00000272395 GPT2Q8TD30 523 aa10.44□□□□□ -0.74
TRIM43-201ENST00000272395 LAMB2P55268 1798 aa10.44□□□□□ -0.74
TRIM43-201ENST00000272395 RABL6Q3YEC7 729 aaPredicted RBP10.44□□□□□ -0.74
TRIM43-201ENST00000272395 LRSAM1Q6UWE0 723 aa10.44□□□□□ -0.74
TRIM43-201ENST00000272395 C7orf43Q8WVR3 580 aa10.44□□□□□ -0.74
TRIM43-201ENST00000272395 ZNF594Q96JF6 807 aaPredicted RBP10.44□□□□□ -0.74
TRIM43-201ENST00000272395 LSG1Q9H089 658 aaKnown RBP10.44□□□□□ -0.74
TRIM43-201ENST00000272395 ANKRD18BA2A2Z9 1011 aa10.43□□□□□ -0.74
TRIM43-201ENST00000272395 HIP1O00291 1037 aa10.43□□□□□ -0.74
TRIM43-201ENST00000272395 RPS8P62241 208 aaKnown RBP10.43□□□□□ -0.74
TRIM43-201ENST00000272395 IFIT5Q13325 482 aaKnown RBP10.43□□□□□ -0.74
TRIM43-201ENST00000272395 OS9Q13438 667 aaPredicted RBP10.43□□□□□ -0.74
TRIM43-201ENST00000272395 ANKRD18AQ8IVF6 992 aa10.43□□□□□ -0.74
TRIM43-201ENST00000272395 KLHDC4Q8TBB5 520 aa10.43□□□□□ -0.74
TRIM43-201ENST00000272395 ECHDC1Q9NTX5 307 aa10.43□□□□□ -0.74
TRIM43-201ENST00000272395 DLEC1Q9Y238 1755 aa10.43□□□□□ -0.74
TRIM43-201ENST00000272395 RTL9Q8NET4 1388 aa10.43□□□□□ -0.74
TRIM43-201ENST00000272395 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
TRIM43-201ENST00000272395 CCDC57Q2TAC2 916 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 TMEM87AQ8NBN3 555 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 PDLIM2Q96JY6 352 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 TTC14Q96N46 770 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 CDC5LQ99459 802 aaKnown RBP10.42□□□□□ -0.74
TRIM43-201ENST00000272395 TM6SF1Q9BZW5 370 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 DIAPH3Q9NSV4 1193 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 LIMCH1Q9UPQ0 1083 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.42□□□□□ -0.74
TRIM43-201ENST00000272395 SNX14Q9Y5W7 946 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 SLX4Q8IY92 1834 aa10.42□□□□□ -0.74
TRIM43-201ENST00000272395 BBOX1O75936 387 aa10.41□□□□□ -0.74
TRIM43-201ENST00000272395 RASSF7Q02833 373 aa10.41□□□□□ -0.74
TRIM43-201ENST00000272395 TAF7LQ5H9L4 462 aa10.41□□□□□ -0.74
TRIM43-201ENST00000272395 KCNB2Q92953 911 aa10.41□□□□□ -0.74
TRIM43-201ENST00000272395 EVI5LQ96CN4 794 aa10.41□□□□□ -0.74
TRIM43-201ENST00000272395 ZSCAN31Q96LW9 406 aaPredicted RBP10.41□□□□□ -0.74
TRIM43-201ENST00000272395 UPF3BQ9BZI7 483 aaKnown RBP10.41□□□□□ -0.74
TRIM43-201ENST00000272395 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
TRIM43-201ENST00000272395 ATP6V0A2Q9Y487 856 aa10.41□□□□□ -0.74
TRIM43-201ENST00000272395 ATP6V1DQ9Y5K8 247 aa10.41□□□□□ -0.74
TRIM43-201ENST00000272395 BRCA1P38398 1863 aaKnown RBP10.41□□□□□ -0.74
TRIM43-201ENST00000272395 IFIT2P09913 472 aaKnown RBP10.41□□□□□ -0.74
TRIM43-201ENST00000272395 IGHMBP2P38935 993 aaKnown RBP10.41□□□□□ -0.74
TRIM43-201ENST00000272395 RFX5P48382 616 aaPredicted RBP10.41□□□□□ -0.74
TRIM43-201ENST00000272395 PUS3Q9BZE2 481 aaKnown RBP10.41□□□□□ -0.74
TRIM43-201ENST00000272395 RBSNQ9H1K0 784 aa10.41□□□□□ -0.74
TRIM43-201ENST00000272395 TMEM63CQ9P1W3 806 aa10.41□□□□□ -0.74
TRIM43-201ENST00000272395 PA2G4Q9UQ80 394 aaKnown RBP10.41□□□□□ -0.74
TRIM43-201ENST00000272395 TAF1P21675 1872 aa10.4□□□□□ -0.74
TRIM43-201ENST00000272395 WTIPA6NIX2 430 aaPredicted RBP10.4□□□□□ -0.74
TRIM43-201ENST00000272395 NFKBIEO00221 500 aa10.4□□□□□ -0.74
TRIM43-201ENST00000272395 MCM5P33992 734 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms