RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 CCDC144CPQ8IYA2 1237 aa11.97□□□□□ -0.49
OTOF-201ENST00000272371 TNNC1P63316 161 aa11.97□□□□□ -0.49
OTOF-201ENST00000272371 SPAG1Q07617 926 aa11.97□□□□□ -0.49
OTOF-201ENST00000272371 MRPS27Q92552 414 aaKnown RBP11.97□□□□□ -0.49
OTOF-201ENST00000272371 ERCC3P19447 782 aa11.97□□□□□ -0.49
OTOF-201ENST00000272371 TMPOP42166 694 aaKnown RBP11.97□□□□□ -0.49
OTOF-201ENST00000272371 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
OTOF-201ENST00000272371 EXOC5O00471 708 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 TTC22Q5TAA0 569 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 RNF10Q8N5U6 811 aaKnown RBP11.96□□□□□ -0.49
OTOF-201ENST00000272371 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
OTOF-201ENST00000272371 GBP5Q96PP8 586 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 UTP14AQ9BVJ6 771 aaKnown RBP11.96□□□□□ -0.49
OTOF-201ENST00000272371 ZNF287Q9HBT7 754 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 IFIT3O14879 490 aaKnown RBP11.96□□□□□ -0.49
OTOF-201ENST00000272371 ZSCAN26Q16670 478 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 GKAP1Q5VSY0 366 aaPredicted RBP11.96□□□□□ -0.49
OTOF-201ENST00000272371 ARHGEF2Q92974 986 aaKnown RBP11.96□□□□□ -0.49
OTOF-201ENST00000272371 EVI5LQ96CN4 794 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 IFNKQ9P0W0 207 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 USP16Q9Y5T5 823 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 AFMP43652 599 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 LRRC59Q96AG4 307 aaKnown RBP11.96□□□□□ -0.49
OTOF-201ENST00000272371 CABP1Q9NZU7 370 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 IDEP14735 1019 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 LMOD1P29536 600 aaPredicted RBP11.96□□□□□ -0.49
OTOF-201ENST00000272371 CCDC25Q86WR0 208 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 NKIRAS1Q9NYS0 192 aa11.96□□□□□ -0.49
OTOF-201ENST00000272371 CTTNBP2Q8WZ74 1663 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 GIGYF1O75420 1035 aaPredicted RBP11.96□□□□□ -0.5
OTOF-201ENST00000272371 LRRC45Q96CN5 670 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 LRRC27Q9C0I9 530 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 MMRN2Q9H8L6 949 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 ORC3Q9UBD5 711 aaPredicted RBP11.96□□□□□ -0.5
OTOF-201ENST00000272371 PABPN1LA6NDY0 278 aaKnown RBP11.96□□□□□ -0.5
OTOF-201ENST00000272371 TTC36A6NLP5 189 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 F13A1P00488 732 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 CFAP157Q5JU67 520 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 FYB2Q5VWT5 728 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 STXBP4Q6ZWJ1 553 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 PHLDB2Q86SQ0 1253 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 MICAL1Q8TDZ2 1067 aa11.96□□□□□ -0.5
OTOF-201ENST00000272371 IGHDP01880 384 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 IFIT1P09914 478 aaKnown RBP11.95□□□□□ -0.5
OTOF-201ENST00000272371 IARSP41252 1262 aaKnown RBP11.95□□□□□ -0.5
OTOF-201ENST00000272371 TMEM110-MUSTN1A8MSY1 372 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 DNM1Q05193 864 aaKnown RBP11.95□□□□□ -0.5
OTOF-201ENST00000272371 CATIPQ7Z7H3 387 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 SSH1Q8WYL5 1049 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 RABEP2Q9H5N1 569 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 CAMSAP2Q08AD1 1489 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 CCDC141Q6ZP82 1450 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 NEK1Q96PY6 1258 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 UBA7P41226 1012 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 IQCA1Q86XH1 822 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 SYCP3Q8IZU3 236 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 SPAG5Q96R06 1193 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 DENND4BO75064 1496 aaPredicted RBP11.95□□□□□ -0.5
OTOF-201ENST00000272371 BTBD11A6QL63 1104 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 USP21Q9UK80 565 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 PTPN23Q9H3S7 1636 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 RTEL1-TNFRSF6BF6WH68 1400 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 SH3BGRP55822 239 aaPredicted RBP11.95□□□□□ -0.5
OTOF-201ENST00000272371 TUBB2AQ13885 445 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 NFE2L2Q16236 605 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.95□□□□□ -0.5
OTOF-201ENST00000272371 CCDC170Q8IYT3 715 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 TUBB2BQ9BVA1 445 aa11.95□□□□□ -0.5
OTOF-201ENST00000272371 CHMP4BP1P59074 171 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 TMCO4Q5TGY1 634 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
OTOF-201ENST00000272371 HMG20BQ9P0W2 317 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 METAP2P50579 478 aaKnown RBP eCLIP11.94□□□□□ -0.5
OTOF-201ENST00000272371 PNMA8AQ86V59 439 aaPredicted RBP11.94□□□□□ -0.5
OTOF-201ENST00000272371 BAG1Q99933 345 aaPredicted RBP11.94□□□□□ -0.5
OTOF-201ENST00000272371 TFCP2L1Q9NZI6 479 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 STAT6P42226 847 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 MKNK2Q9HBH9 465 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 ARL1P40616 181 aaPredicted RBP11.94□□□□□ -0.5
OTOF-201ENST00000272371 CABP4P57796 275 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 CCDC42Q96M95 316 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 SSX2IPQ9Y2D8 614 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 FAM135AQ9P2D6 1515 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 ZNF131P52739 623 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 PPP1R7Q15435 360 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 NECAB1Q8N987 351 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 JAKMIP2Q96AA8 810 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 PPP1R9BQ96SB3 815 aa11.94□□□□□ -0.5
OTOF-201ENST00000272371 UBXN1Q04323 297 aa11.93□□□□□ -0.5
OTOF-201ENST00000272371 MAP7Q14244 749 aa11.93□□□□□ -0.5
OTOF-201ENST00000272371 RBBP5Q15291 538 aaKnown RBP11.93□□□□□ -0.5
OTOF-201ENST00000272371 MCUR1Q96AQ8 359 aa11.93□□□□□ -0.5
OTOF-201ENST00000272371 RANBP6O60518 1105 aaKnown RBP11.93□□□□□ -0.5
OTOF-201ENST00000272371 PEX19P40855 299 aa11.93□□□□□ -0.5
OTOF-201ENST00000272371 ZSCAN29Q8IWY8 852 aaPredicted RBP11.93□□□□□ -0.5
OTOF-201ENST00000272371 FCHSD2O94868 740 aa11.93□□□□□ -0.5
OTOF-201ENST00000272371 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
OTOF-201ENST00000272371 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
OTOF-201ENST00000272371 RGS22Q8NE09 1264 aa11.93□□□□□ -0.5
OTOF-201ENST00000272371 ZNF622Q969S3 477 aaKnown RBP eCLIP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms