RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 RGS17Q9UGC6 210 aaPredicted RBP9.39□□□□□ -0.91
ZIM3-201ENST00000269834 NRXN3Q9Y4C0 1643 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 NALCNQ8IZF0 1738 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 SFI1A8K8P3 1242 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 DKK1O94907 266 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 DAB2P98082 770 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 CCDC173Q0VFZ6 552 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 NR1H3Q13133 447 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 RABEP1Q15276 862 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 SYCP2LQ5T4T6 812 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 PGBD3Q8N328 593 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 EID1Q9Y6B2 187 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 RGPD1P0DJD0 1748 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 KLHL40Q2TBA0 621 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 ANKRD45Q5TZF3 282 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 FERMT3Q86UX7 667 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 TTC13Q8NBP0 860 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 PPP1R9BQ96SB3 815 aa9.38□□□□□ -0.91
ZIM3-201ENST00000269834 ENPP3O14638 875 aa9.37□□□□□ -0.91
ZIM3-201ENST00000269834 HSPA2P54652 639 aa9.37□□□□□ -0.91
ZIM3-201ENST00000269834 SRPK1Q96SB4 655 aaKnown RBP9.37□□□□□ -0.91
ZIM3-201ENST00000269834 POLKQ9UBT6 870 aa9.37□□□□□ -0.91
ZIM3-201ENST00000269834 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
ZIM3-201ENST00000269834 CTSHP09668 335 aa9.37□□□□□ -0.91
ZIM3-201ENST00000269834 FKBP5Q13451 457 aaPredicted RBP9.37□□□□□ -0.91
ZIM3-201ENST00000269834 TRIM44Q96DX7 344 aaPredicted RBP9.37□□□□□ -0.91
ZIM3-201ENST00000269834 CDK19Q9BWU1 502 aa9.37□□□□□ -0.91
ZIM3-201ENST00000269834 FANCLQ9NW38 375 aa9.37□□□□□ -0.91
ZIM3-201ENST00000269834 TOPAZ1Q8N9V7 1692 aa9.37□□□□□ -0.91
ZIM3-201ENST00000269834 CPS1P31327 1500 aa9.37□□□□□ -0.91
ZIM3-201ENST00000269834 HSP90AA1P07900 732 aaKnown RBP9.36□□□□□ -0.91
ZIM3-201ENST00000269834 SIRT2Q8IXJ6 389 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 SFMBT1Q9UHJ3 866 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 FAM221BA6H8Z2 402 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 C6orf229H3BNL8 230 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 RRP9O43818 475 aaKnown RBP9.36□□□□□ -0.91
ZIM3-201ENST00000269834 PRPF40AO75400 957 aaKnown RBP9.36□□□□□ -0.91
ZIM3-201ENST00000269834 NUCB2P80303 420 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 EHHADHQ08426 723 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 SAFB2Q14151 953 aaKnown RBP eCLIP9.36□□□□□ -0.91
ZIM3-201ENST00000269834 LRRC41Q15345 812 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 USP48Q86UV5 1035 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 NEUROD4Q9HD90 331 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 STK26Q9P289 416 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 RGS12O14924 1447 aa9.36□□□□□ -0.91
ZIM3-201ENST00000269834 CD2BP2O95400 341 aaKnown RBP9.35□□□□□ -0.91
ZIM3-201ENST00000269834 LDHAP00338 332 aaKnown RBP9.35□□□□□ -0.91
ZIM3-201ENST00000269834 IL13P35225 146 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 GAS2L3Q86XJ1 694 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 DCTPP1Q9H773 170 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 MBIPQ9NS73 344 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 A2ML1A8K2U0 1454 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 CYP2E1P05181 493 aaPredicted RBP9.35□□□□□ -0.91
ZIM3-201ENST00000269834 TPM2P07951 284 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 ZNF445P59923 1031 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 SERINC3Q13530 473 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 TWISTNBQ3B726 338 aaPredicted RBP9.35□□□□□ -0.91
ZIM3-201ENST00000269834 TTC22Q5TAA0 569 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 INTS3Q68E01 1043 aaKnown RBP9.35□□□□□ -0.91
ZIM3-201ENST00000269834 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 PDCD7Q8N8D1 485 aaKnown RBP9.35□□□□□ -0.91
ZIM3-201ENST00000269834 EPAS1Q99814 870 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 CCDC87Q9NVE4 849 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 FMN2Q9NZ56 1722 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 ERBB4Q15303 1308 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 GPR182O15218 404 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 TOM1O60784 492 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 BAG4O95429 457 aaKnown RBP9.35□□□□□ -0.91
ZIM3-201ENST00000269834 GSPT1P15170 499 aaKnown RBP9.35□□□□□ -0.91
ZIM3-201ENST00000269834 UBE4AQ14139 1066 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 TPCN2Q8NHX9 752 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 CABP1Q9NZU7 370 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 MRVI1Q9Y6F6 885 aa9.35□□□□□ -0.91
ZIM3-201ENST00000269834 TECPR2O15040 1411 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 AK9Q5TCS8 1911 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 KIAA0232Q92628 1395 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 HS1BP3Q53T59 392 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 JAMLQ86YT9 394 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 SRA1Q9HD15 236 aaKnown RBP9.34□□□□□ -0.91
ZIM3-201ENST00000269834 DNAAF2Q9NVR5 837 aaKnown RBP9.34□□□□□ -0.91
ZIM3-201ENST00000269834 ATF4P18848 351 aaPredicted RBP9.34□□□□□ -0.91
ZIM3-201ENST00000269834 MPSTP25325 297 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 DHX8Q14562 1220 aaKnown RBP9.34□□□□□ -0.91
ZIM3-201ENST00000269834 WDR78Q5VTH9 848 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 TSPYL6Q8N831 410 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 PRPF38AQ8NAV1 312 aaKnown RBP9.34□□□□□ -0.91
ZIM3-201ENST00000269834 PNMA1Q8ND90 353 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 PHACTR3Q96KR7 559 aa9.34□□□□□ -0.91
ZIM3-201ENST00000269834 MAP3K20Q9NYL2 800 aaKnown RBP9.34□□□□□ -0.91
ZIM3-201ENST00000269834 HCLS1P14317 486 aaPredicted RBP9.33□□□□□ -0.92
ZIM3-201ENST00000269834 GNALP38405 381 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 PPP4CP60510 307 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 RPAP2Q8IXW5 612 aaPredicted RBP9.33□□□□□ -0.92
ZIM3-201ENST00000269834 ANKRD44Q8N8A2 993 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 ANP32BQ92688 251 aaKnown RBP9.33□□□□□ -0.92
ZIM3-201ENST00000269834 ZNF512BQ96KM6 892 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms