RNA–Protein interactions for RNA: ENST00000269385.8

CBX8-201, Transcript of chromobox 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX8, Length 3,791 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-201ENST00000269385 SH3BP1Q9Y3L3 701 aa18.72■□□□□ 0.59
CBX8-201ENST00000269385 RTL1A6NKG5 1358 aa18.72■□□□□ 0.59
CBX8-201ENST00000269385 SHTN1A0MZ66 631 aa18.72■□□□□ 0.59
CBX8-201ENST00000269385 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
CBX8-201ENST00000269385 CC2D1AQ6P1N0 951 aaPredicted RBP18.72■□□□□ 0.59
CBX8-201ENST00000269385 TFIP11Q9UBB9 837 aaKnown RBP18.72■□□□□ 0.59
CBX8-201ENST00000269385 KCNA6P17658 529 aa18.71■□□□□ 0.59
CBX8-201ENST00000269385 HDGFP51858 240 aaKnown RBP18.71■□□□□ 0.59
CBX8-201ENST00000269385 FBXW10Q5XX13 1052 aa18.71■□□□□ 0.59
CBX8-201ENST00000269385 MCM10Q7L590 875 aa18.71■□□□□ 0.59
CBX8-201ENST00000269385 TRIM6Q9C030 488 aaPredicted RBP18.71■□□□□ 0.59
CBX8-201ENST00000269385 FAM53CQ9NYF3 392 aa18.71■□□□□ 0.59
CBX8-201ENST00000269385 NAT10Q9H0A0 1025 aaKnown RBP18.71■□□□□ 0.59
CBX8-201ENST00000269385 GNG11P61952 73 aa18.71■□□□□ 0.59
CBX8-201ENST00000269385 LRRN4CLQ8ND94 238 aa18.71■□□□□ 0.59
CBX8-201ENST00000269385 ERCC4Q92889 916 aaPredicted RBP18.71■□□□□ 0.59
CBX8-201ENST00000269385 EFCAB8A8MWE9 144 aa18.7■□□□□ 0.58
CBX8-201ENST00000269385 EYA1Q99502 592 aa18.7■□□□□ 0.58
CBX8-201ENST00000269385 GNL3LQ9NVN8 582 aaKnown RBP18.7■□□□□ 0.58
CBX8-201ENST00000269385 C5P01031 1676 aa18.7■□□□□ 0.58
CBX8-201ENST00000269385 ATP2B2Q01814 1243 aa18.7■□□□□ 0.58
CBX8-201ENST00000269385 ZNF513Q8N8E2 541 aaPredicted RBP18.7■□□□□ 0.58
CBX8-201ENST00000269385 CNNM3Q8NE01 707 aa18.7■□□□□ 0.58
CBX8-201ENST00000269385 ATG3Q9NT62 314 aa18.7■□□□□ 0.58
CBX8-201ENST00000269385 ODF2LQ9ULJ1 636 aa18.7■□□□□ 0.58
CBX8-201ENST00000269385 GBP2P32456 591 aaPredicted RBP18.69■□□□□ 0.58
CBX8-201ENST00000269385 PPP2R3AQ06190 1150 aa18.69■□□□□ 0.58
CBX8-201ENST00000269385 LONRF2Q1L5Z9 754 aa18.69■□□□□ 0.58
CBX8-201ENST00000269385 HDXQ7Z353 690 aa18.69■□□□□ 0.58
CBX8-201ENST00000269385 ANKRD18AQ8IVF6 992 aa18.69■□□□□ 0.58
CBX8-201ENST00000269385 BICC1Q9H694 974 aaKnown RBP18.69■□□□□ 0.58
CBX8-201ENST00000269385 DDX19AQ9NUU7 478 aaKnown RBP18.69■□□□□ 0.58
CBX8-201ENST00000269385 LRRFIP1Q32MZ4 808 aaKnown RBP18.69■□□□□ 0.58
CBX8-201ENST00000269385 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
CBX8-201ENST00000269385 SPATS2LQ9NUQ6 558 aaKnown RBP18.69■□□□□ 0.58
CBX8-201ENST00000269385 KIF3CO14782 793 aa18.69■□□□□ 0.58
CBX8-201ENST00000269385 LARP1BQ659C4 914 aaKnown RBP18.69■□□□□ 0.58
CBX8-201ENST00000269385 NYAP1Q6ZVC0 841 aa18.69■□□□□ 0.58
CBX8-201ENST00000269385 CCDC83Q8IWF9 413 aa18.69■□□□□ 0.58
CBX8-201ENST00000269385 NUCKS1Q9H1E3 243 aaKnown RBP18.69■□□□□ 0.58
CBX8-201ENST00000269385 PSD3Q9NYI0 1048 aa18.69■□□□□ 0.58
CBX8-201ENST00000269385 CAPN7Q9Y6W3 813 aa18.69■□□□□ 0.58
CBX8-201ENST00000269385 CEMIPQ8WUJ3 1361 aa18.68■□□□□ 0.58
CBX8-201ENST00000269385 ETF1P62495 437 aaKnown RBP18.68■□□□□ 0.58
CBX8-201ENST00000269385 OTUD7AQ8TE49 926 aaPredicted RBP18.68■□□□□ 0.58
CBX8-201ENST00000269385 HNRNPH1P31943 449 aaKnown RBP18.68■□□□□ 0.58
CBX8-201ENST00000269385 CEBPZQ03701 1054 aaKnown RBP18.68■□□□□ 0.58
CBX8-201ENST00000269385 ELF1P32519 619 aa18.68■□□□□ 0.58
CBX8-201ENST00000269385 GSCP56915 257 aaPredicted RBP18.68■□□□□ 0.58
CBX8-201ENST00000269385 SALL3Q9BXA9 1300 aa18.67■□□□□ 0.58
CBX8-201ENST00000269385 NUTM2FA1L443 756 aa18.67■□□□□ 0.58
CBX8-201ENST00000269385 TBC1D8O95759 1140 aa18.67■□□□□ 0.58
CBX8-201ENST00000269385 GOLGA1Q92805 767 aa18.67■□□□□ 0.58
CBX8-201ENST00000269385 PDE6BP35913 854 aa18.67■□□□□ 0.58
CBX8-201ENST00000269385 PPFIA4O75335 1185 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 NBPF5PQ86XG9 351 aaPredicted RBP18.66■□□□□ 0.58
CBX8-201ENST00000269385 PPP1R13BQ96KQ4 1090 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 SCN11AQ9UI33 1791 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 ZRANB2O95218 330 aaKnown RBP eCLIP18.66■□□□□ 0.58
CBX8-201ENST00000269385 CCT5P48643 541 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 TUBB4AP04350 444 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 REXO1L1PQ8IX06 675 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 CEP57L1Q8IYX8 460 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 PARD6BQ9BYG5 372 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 LRRCC1Q9C099 1032 aa18.66■□□□□ 0.58
CBX8-201ENST00000269385 SASH3O75995 380 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 PAX7P23759 505 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 NAP1L1P55209 391 aaKnown RBP18.65■□□□□ 0.58
CBX8-201ENST00000269385 RNF187Q5TA31 235 aaPredicted RBP18.65■□□□□ 0.58
CBX8-201ENST00000269385 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 OTUD6BQ8N6M0 293 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 PDILTQ8N807 584 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 PLA2G4DQ86XP0 818 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 PXDNQ92626 1479 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 GJB2P29033 226 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 HOXC9P31274 260 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 IRX1P78414 480 aaPredicted RBP18.65■□□□□ 0.58
CBX8-201ENST00000269385 CUL4AQ13619 759 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 FAM173BQ6P4H8 233 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 SDF4Q9BRK5 362 aa18.65■□□□□ 0.58
CBX8-201ENST00000269385 ZSCAN16Q9H4T2 348 aaPredicted RBP18.64■□□□□ 0.58
CBX8-201ENST00000269385 HMMRO75330 724 aa18.64■□□□□ 0.57
CBX8-201ENST00000269385 CCDC150Q8NCX0 1101 aa18.64■□□□□ 0.57
CBX8-201ENST00000269385 CABS1Q96KC9 395 aa18.64■□□□□ 0.57
CBX8-201ENST00000269385 DCTPP1Q9H773 170 aa18.64■□□□□ 0.57
CBX8-201ENST00000269385 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
CBX8-201ENST00000269385 EZRP15311 586 aaKnown RBP18.64■□□□□ 0.57
CBX8-201ENST00000269385 ZSCAN12O43309 604 aa18.63■□□□□ 0.57
CBX8-201ENST00000269385 ERCC3P19447 782 aa18.63■□□□□ 0.57
CBX8-201ENST00000269385 APOBRQ0VD83 1088 aa18.63■□□□□ 0.57
CBX8-201ENST00000269385 RBBP5Q15291 538 aaKnown RBP18.63■□□□□ 0.57
CBX8-201ENST00000269385 NBPF9Q3BBW0 867 aa18.63■□□□□ 0.57
CBX8-201ENST00000269385 G2E3Q7L622 706 aa18.63■□□□□ 0.57
CBX8-201ENST00000269385 JMYQ8N9B5 988 aa18.63■□□□□ 0.57
CBX8-201ENST00000269385 TDRD7Q8NHU6 1098 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms