RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 NSD3Q9BZ95 1437 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 ANO6Q4KMQ2 910 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 AP1ARQ63HQ0 302 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 SYT1P21579 422 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 VIMP08670 466 aaKnown RBP13.64□□□□□ -0.23
SRRM4-201ENST00000267260 ZGPATQ8N5A5 531 aaKnown RBP13.64□□□□□ -0.23
SRRM4-201ENST00000267260 UBLCP1Q8WVY7 318 aaPredicted RBP13.64□□□□□ -0.23
SRRM4-201ENST00000267260 NEK11Q8NG66 645 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 B4DLN1 442 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
SRRM4-201ENST00000267260 TAOK1Q7L7X3 1001 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 ARHGEF2Q92974 986 aaKnown RBP13.63□□□□□ -0.23
SRRM4-201ENST00000267260 BCAP29Q9UHQ4 241 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 SSFA2P28290 1259 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 CUL7Q14999 1698 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 GNAQP50148 359 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 THEMISQ8N1K5 641 aaPredicted RBP13.63□□□□□ -0.23
SRRM4-201ENST00000267260 LDHCP07864 332 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 DUSP27Q5VZP5 1158 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.63□□□□□ -0.23
SRRM4-201ENST00000267260 UTP11Q9Y3A2 253 aaKnown RBP13.63□□□□□ -0.23
SRRM4-201ENST00000267260 SLFN5Q08AF3 891 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 RASSF2P50749 326 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 SRGAP1Q7Z6B7 1085 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 ATP6V0A2Q9Y487 856 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 EEF2P13639 858 aaKnown RBP13.63□□□□□ -0.23
SRRM4-201ENST00000267260 RSPH3Q86UC2 560 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 TTC16Q8NEE8 873 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 GSDMBQ8TAX9 411 aa13.63□□□□□ -0.23
SRRM4-201ENST00000267260 USP16Q9Y5T5 823 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 CALCOCO2Q13137 446 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 RUFY3Q7L099 469 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 FAM200AQ8TCP9 573 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 IFT81Q8WYA0 676 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 NEK1Q96PY6 1258 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
SRRM4-201ENST00000267260 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 GIPC1O14908 333 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 CETN3O15182 167 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 DNAJC8O75937 253 aaPredicted RBP13.62□□□□□ -0.23
SRRM4-201ENST00000267260 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
SRRM4-201ENST00000267260 HSPA1LP34931 641 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 MYCBPQ99417 103 aaPredicted RBP13.62□□□□□ -0.23
SRRM4-201ENST00000267260 CABP5Q9NP86 173 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 TMOD3Q9NYL9 352 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 NDUFAB1O14561 156 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 GEN1Q17RS7 908 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 INF2Q27J81 1249 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 GCKP35557 465 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
SRRM4-201ENST00000267260 CDC5LQ99459 802 aaKnown RBP13.62□□□□□ -0.23
SRRM4-201ENST00000267260 CACYBPQ9HB71 228 aaKnown RBP13.62□□□□□ -0.23
SRRM4-201ENST00000267260 SMIM23A6NLE4 172 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 SEL1L2Q5TEA6 688 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 WDR78Q5VTH9 848 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 CCDC42Q96M95 316 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
SRRM4-201ENST00000267260 SEPT8Q92599 483 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 KIFAP3Q92845 792 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 PLCB1Q9NQ66 1216 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 ZKSCAN5Q9Y2L8 839 aa13.62□□□□□ -0.23
SRRM4-201ENST00000267260 BMP2KLQ5H9B9 411 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 TXNDC2Q86VQ3 553 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 FLIIQ13045 1269 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 SLC26A6Q9BXS9 759 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 SLC52A1Q9NWF4 448 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 IFIT1BQ5T764 474 aaKnown RBP13.61□□□□□ -0.23
SRRM4-201ENST00000267260 LUC7L3O95232 432 aaKnown RBP13.61□□□□□ -0.23
SRRM4-201ENST00000267260 CALML3P27482 149 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 RRAGBQ5VZM2 374 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 MMRN2Q9H8L6 949 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 ACTN4O43707 911 aaKnown RBP13.61□□□□□ -0.23
SRRM4-201ENST00000267260 PPP1R2P41236 205 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 CRNKL1Q9BZJ0 848 aaKnown RBP13.61□□□□□ -0.23
SRRM4-201ENST00000267260 ZC4H2Q9NQZ6 224 aa13.61□□□□□ -0.23
SRRM4-201ENST00000267260 ORC3Q9UBD5 711 aaPredicted RBP13.61□□□□□ -0.23
SRRM4-201ENST00000267260 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
SRRM4-201ENST00000267260 FAM160A1Q05DH4 1040 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 CCDC25Q86WR0 208 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
SRRM4-201ENST00000267260 PLCB3Q01970 1234 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
SRRM4-201ENST00000267260 RAB11FIP4Q86YS3 637 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 CNGA4Q8IV77 575 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 TBC1D2Q9BYX2 928 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 EIF2AK4Q9P2K8 1649 aaKnown RBP13.6□□□□□ -0.23
SRRM4-201ENST00000267260 CAPZA3Q96KX2 299 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 WTAPQ15007 396 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 RBBP5Q15291 538 aaKnown RBP13.6□□□□□ -0.23
SRRM4-201ENST00000267260 ZNF131P52739 623 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 TMCO4Q5TGY1 634 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 CCDC117Q8IWD4 279 aaPredicted RBP13.6□□□□□ -0.23
SRRM4-201ENST00000267260 STK10O94804 968 aaKnown RBP13.6□□□□□ -0.23
SRRM4-201ENST00000267260 FAM13AO94988 1023 aa13.6□□□□□ -0.23
SRRM4-201ENST00000267260 COG7P83436 770 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 GABPB1Q06547 395 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms