RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 A0A1B0GUL7 405 aa15.31■□□□□ 0.04
CPSF6-201ENST00000266679 MSNP26038 577 aaKnown RBP15.31■□□□□ 0.04
CPSF6-201ENST00000266679 DNAJC10Q8IXB1 793 aa15.31■□□□□ 0.04
CPSF6-201ENST00000266679 CCDC85AQ96PX6 553 aaPredicted RBP15.31■□□□□ 0.04
CPSF6-201ENST00000266679 LRRC2Q9BYS8 371 aa15.31■□□□□ 0.04
CPSF6-201ENST00000266679 SPEF2Q9C093 1822 aa15.3■□□□□ 0.04
CPSF6-201ENST00000266679 IFIT1P09914 478 aaKnown RBP15.3■□□□□ 0.04
CPSF6-201ENST00000266679 PDCP20941 246 aa15.3■□□□□ 0.04
CPSF6-201ENST00000266679 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
CPSF6-201ENST00000266679 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
CPSF6-201ENST00000266679 CIAO1O76071 339 aa15.29■□□□□ 0.04
CPSF6-201ENST00000266679 TCIRG1Q13488 830 aa15.29■□□□□ 0.04
CPSF6-201ENST00000266679 FAM173BQ6P4H8 233 aa15.29■□□□□ 0.04
CPSF6-201ENST00000266679 KIF6Q6ZMV9 814 aa15.29■□□□□ 0.04
CPSF6-201ENST00000266679 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
CPSF6-201ENST00000266679 JAK2O60674 1132 aa15.29■□□□□ 0.04
CPSF6-201ENST00000266679 GTF3C6Q969F1 213 aa15.29■□□□□ 0.04
CPSF6-201ENST00000266679 HELLSQ9NRZ9 838 aa15.29■□□□□ 0.04
CPSF6-201ENST00000266679 KCNQ4P56696 695 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 KRT85P78386 507 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 CCDC57Q2TAC2 916 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 HS1BP3Q53T59 392 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 ZMYM1Q5SVZ6 1142 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 PIGBQ92521 554 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 MAST3O60307 1309 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 LETM1O95202 739 aaPredicted RBP15.28■□□□□ 0.04
CPSF6-201ENST00000266679 ADORA1P30542 326 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 FGD1P98174 961 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 TTC6Q86TZ1 520 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 CEP126Q9P2H0 1117 aa15.28■□□□□ 0.04
CPSF6-201ENST00000266679 TAF7LQ5H9L4 462 aa15.27■□□□□ 0.04
CPSF6-201ENST00000266679 GIMAP6Q6P9H5 292 aa15.27■□□□□ 0.04
CPSF6-201ENST00000266679 BRF1Q92994 677 aa15.27■□□□□ 0.04
CPSF6-201ENST00000266679 FAM89AQ96GI7 184 aa15.27■□□□□ 0.04
CPSF6-201ENST00000266679 ATG3Q9NT62 314 aa15.27■□□□□ 0.04
CPSF6-201ENST00000266679 ANKRD36CQ5JPF3 1778 aa15.27■□□□□ 0.03
CPSF6-201ENST00000266679 A0A0G2JLW4 131 aa15.27■□□□□ 0.03
CPSF6-201ENST00000266679 M0R2C6 588 aa15.27■□□□□ 0.03
CPSF6-201ENST00000266679 RNF113AO15541 343 aaKnown RBP15.27■□□□□ 0.03
CPSF6-201ENST00000266679 ZBTB7AO95365 584 aa15.27■□□□□ 0.03
CPSF6-201ENST00000266679 LRRC4BQ9NT99 713 aa15.27■□□□□ 0.03
CPSF6-201ENST00000266679 LY75O60449 1722 aa15.26■□□□□ 0.03
CPSF6-201ENST00000266679 HCLS1P14317 486 aaPredicted RBP15.26■□□□□ 0.03
CPSF6-201ENST00000266679 FKBP4Q02790 459 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPSF6-201ENST00000266679 TTC39AQ5SRH9 613 aa15.26■□□□□ 0.03
CPSF6-201ENST00000266679 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
CPSF6-201ENST00000266679 DDX11Q96FC9 970 aa15.26■□□□□ 0.03
CPSF6-201ENST00000266679 DSCC1Q9BVC3 393 aa15.26■□□□□ 0.03
CPSF6-201ENST00000266679 CCDC39Q9UFE4 941 aa15.26■□□□□ 0.03
CPSF6-201ENST00000266679 MYH15Q9Y2K3 1946 aa15.26■□□□□ 0.03
CPSF6-201ENST00000266679 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
CPSF6-201ENST00000266679 PDIA4P13667 645 aaKnown RBP15.25■□□□□ 0.03
CPSF6-201ENST00000266679 FAM184AQ8NB25 1140 aa15.25■□□□□ 0.03
CPSF6-201ENST00000266679 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.25■□□□□ 0.03
CPSF6-201ENST00000266679 NOL7Q9UMY1 257 aaKnown RBP15.25■□□□□ 0.03
CPSF6-201ENST00000266679 MYH7P12883 1935 aa15.25■□□□□ 0.03
CPSF6-201ENST00000266679 HSPD1P10809 573 aaKnown RBP15.25■□□□□ 0.03
CPSF6-201ENST00000266679 GPTP24298 496 aa15.25■□□□□ 0.03
CPSF6-201ENST00000266679 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
CPSF6-201ENST00000266679 XAGE2Q96GT9 111 aa15.25■□□□□ 0.03
CPSF6-201ENST00000266679 STK32BQ9NY57 414 aa15.25■□□□□ 0.03
CPSF6-201ENST00000266679 MYH3P11055 1940 aa15.25■□□□□ 0.03
CPSF6-201ENST00000266679 RIC1Q4ADV7 1423 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 STARD3NLO95772 234 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 PTMAP06454 111 aaKnown RBP15.24■□□□□ 0.03
CPSF6-201ENST00000266679 FOSBP53539 338 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 SCRN1Q12765 414 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 SLC15A2Q16348 729 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 SYNE4Q8N205 404 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 TEX13AQ9BXU3 409 aaPredicted RBP15.24■□□□□ 0.03
CPSF6-201ENST00000266679 SPON1Q9HCB6 807 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 TFIP11Q9UBB9 837 aaKnown RBP15.24■□□□□ 0.03
CPSF6-201ENST00000266679 MAP3K15Q6ZN16 1313 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 HMGB1P09429 215 aaKnown RBP15.24■□□□□ 0.03
CPSF6-201ENST00000266679 APOBRQ0VD83 1088 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 HLFQ16534 295 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 CCDC158Q5M9N0 1113 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 DHX32Q7L7V1 743 aaKnown RBP15.24■□□□□ 0.03
CPSF6-201ENST00000266679 VSIG10Q8N0Z9 540 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.24■□□□□ 0.03
CPSF6-201ENST00000266679 AKAP2Q9Y2D5 859 aa15.24■□□□□ 0.03
CPSF6-201ENST00000266679 E7EWF7 191 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 TRIM28Q13263 835 aaKnown RBP15.23■□□□□ 0.03
CPSF6-201ENST00000266679 IFIT5Q13325 482 aaKnown RBP15.23■□□□□ 0.03
CPSF6-201ENST00000266679 UVSSAQ2YD98 709 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 HSP90AB3PQ58FF7 597 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 ZBTB38Q8NAP3 1195 aaPredicted RBP15.23■□□□□ 0.03
CPSF6-201ENST00000266679 SPATA32Q96LK8 384 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 FUCA2Q9BTY2 467 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 PPP1R1BQ9UD71 204 aaPredicted RBP15.23■□□□□ 0.03
CPSF6-201ENST00000266679 USP25Q9UHP3 1055 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 ATF5Q9Y2D1 282 aaPredicted RBP15.23■□□□□ 0.03
CPSF6-201ENST00000266679 ZKSCAN5Q9Y2L8 839 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 ELP1O95163 1332 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 H3BQV1 296 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 PFKFB2O60825 505 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 LIG1P18858 919 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 RESTQ13127 1097 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 SCARF1Q14162 830 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 IFFO2Q5TF58 517 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms